Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:37:50 (21931): wrapper (7.7.26015): starting
02:37:50 (21931): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 02:37:50] Arguments: --nthreads 12
[2026-03-12 02:37:50] Threads: 12
[2026-03-12 02:37:50] Checking for CVMFS
[2026-03-12 02:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 02:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 02:37:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 02:37:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 02:37:50] 2.11.2.0 22587 154513 100652 157186 3 52 17467271 20275200 1 130560 0 60865037 99.915 9187052 28859 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 02:37:50] CVMFS is ok
[2026-03-12 02:37:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 02:37:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 02:37:50] Further information can be found at the LHC@home message board.
[2026-03-12 02:37:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 02:37:50] Checking for apptainer binary...
[2026-03-12 02:37:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 02:37:50] Running /usr/bin/apptainer --version
[2026-03-12 02:37:50] apptainer version 1.3.2-1.el7
[2026-03-12 02:37:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 02:37:52] c-205-13.aglt2.org
[2026-03-12 02:37:52] apptainer works
[2026-03-12 02:37:52] Set ATHENA_PROC_NUMBER=12
[2026-03-12 02:37:52] Set ATHENA_CORE_NUMBER=12
[2026-03-12 02:37:52] Starting ATLAS job with PandaID=7037105751
[2026-03-12 02:37:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 04:03:25]  *** The last 200 lines of the pilot log: ***
[2026-03-12 04:03:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 04:03:25]  is_altstaged=None
[2026-03-12 04:03:25]  is_tar=False
[2026-03-12 04:03:25]  lfn=log.48838577._009861.job.log.tgz.1
[2026-03-12 04:03:25]  mtime=0
[2026-03-12 04:03:25]  protocol_id=None
[2026-03-12 04:03:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 04:03:25]  replicas=None
[2026-03-12 04:03:25]  scope=mc23_13p6TeV
[2026-03-12 04:03:25]  status=None
[2026-03-12 04:03:25]  status_code=0
[2026-03-12 04:03:25]  storage_token=
[2026-03-12 04:03:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7037105751/log.48838577._009861.job.log.tgz.1
[2026-03-12 04:03:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/10/log.48838577._009861.job.log.tgz.1
[2026-03-12 04:03:25]  workdir=None
[2026-03-12 04:03:25] ]
[2026-03-12 04:03:25] 2026-03-12 08:02:27,065 | INFO     | transferring file log.48838577._009861.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7037105751/log.48838577._009861.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 04:03:25] 2026-03-12 08:02:27,066 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7037105751/log.48838577._009861.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838577._009861.job
[2026-03-12 04:03:25] 2026-03-12 08:02:27,087 | INFO     | adding to output.list: log.48838577._009861.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/10/log.48838577._009861.job.log.tg
[2026-03-12 04:03:25] 2026-03-12 08:02:27,088 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 04:03:25] 2026-03-12 08:02:27,088 | INFO     | summary of transferred files:
[2026-03-12 04:03:25] 2026-03-12 08:02:27,089 | INFO     |  -- lfn=log.48838577._009861.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 04:03:25] 2026-03-12 08:02:27,089 | INFO     | stage-out finished correctly
[2026-03-12 04:03:25] 2026-03-12 08:02:28,762 | INFO     | time since job start (5056s) is within the limit (349056.0s)
[2026-03-12 04:03:25] 2026-03-12 08:02:29,769 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 04:03:25] 2026-03-12 08:02:30,768 | INFO     | time since job start (5058s) is within the limit (349056.0s)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,853 | INFO     | job 7037105751 has state=finished
[2026-03-12 04:03:25] 2026-03-12 08:02:31,853 | INFO     | preparing for final server update for job 7037105751 in state='finished'
[2026-03-12 04:03:25] 2026-03-12 08:02:31,854 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7037105751/jobReport.json
[2026-03-12 04:03:25] 2026-03-12 08:02:31,856 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 04:03:25] 2026-03-12 08:02:31,857 | INFO     | this job has now completed (state=finished)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,857 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,857 | INFO     | log transfer has been attempted: DONE
[2026-03-12 04:03:25] 2026-03-12 08:02:31,857 | INFO     | job 7037105751 has finished - writing final server update
[2026-03-12 04:03:25] 2026-03-12 08:02:31,858 | INFO     | total number of processed events: 400 (read)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,860 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037105751/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,860 | INFO     | extracted standard info from prmon json
[2026-03-12 04:03:25] 2026-03-12 08:02:31,860 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 04:03:25] 2026-03-12 08:02:31,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 04:03:25] 2026-03-12 08:02:31,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 04:03:25] 2026-03-12 08:02:31,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | fitting pss+swap vs Time
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | sum of square deviations: 136095575.0
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | sum of deviations: -8579775965.0
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | mean x: 1773300108.5
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | mean y: 2804390.236842105
[2026-03-12 04:03:25] 2026-03-12 08:02:31,863 | INFO     | intersect: 111795694420.93912
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | chi2: 0.06416962264873416
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | current memory leak: -63.04 B/s (using 76 data points, chi2=0.06)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | ..............................
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | . Timing measurements:
[2026-03-12 04:03:25] 2026-03-12 08:02:31,864 | INFO     | . get job = 0 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . initial setup = 7 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . payload setup = 7 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . stage-in = 0 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . payload execution = 5035 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . stage-out = 0 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | . log creation = 0 s
[2026-03-12 04:03:25] 2026-03-12 08:02:31,865 | INFO     | ..............................
[2026-03-12 04:03:25] 2026-03-12 08:02:32,423 | INFO     | 
[2026-03-12 04:03:25] 2026-03-12 08:02:32,423 | INFO     | job summary report
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | --------------------------------------------------
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | PanDA job id: 7037105751
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | task id: 48838577
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | errors: (none)
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 04:03:25] 2026-03-12 08:02:32,424 | INFO     | pilot state: finished 
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | transexitcode: 0
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | exeerrorcode: 0
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | exeerrordiag: 
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | exitcode: 0
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | exitmsg: OK
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | cpuconsumptiontime: 55009 s
[2026-03-12 04:03:25] 2026-03-12 08:02:32,425 | INFO     | nevents: 400
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | neventsw: 0
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | pid: 30119
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | pgrp: 30119
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | corecount: 12
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | event service: False
[2026-03-12 04:03:25] 2026-03-12 08:02:32,426 | INFO     | sizes: {0: 2279805, 1: 2280266, 12: 2280266, 5042: 2306517, 5043: 2315515, 5046: 2315571, 5048: 2315893}
[2026-03-12 04:03:25] 2026-03-12 08:02:32,427 | INFO     | --------------------------------------------------
[2026-03-12 04:03:25] 2026-03-12 08:02:32,427 | INFO     | 
[2026-03-12 04:03:25] 2026-03-12 08:02:32,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 04:03:25] 2026-03-12 08:02:32,457 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,458 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,458 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,458 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,460 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 04:03:25] 2026-03-12 08:02:32,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,461 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 04:03:25] 2026-03-12 08:02:32,461 | INFO     | job 7037105751 has completed (purged errors)
[2026-03-12 04:03:25] 2026-03-12 08:02:32,461 | INFO     | overall cleanup function is called
[2026-03-12 04:03:25] 2026-03-12 08:02:33,469 | INFO     | --- collectZombieJob: --- 10, [30119]
[2026-03-12 04:03:25] 2026-03-12 08:02:33,469 | INFO     | zombie collector waiting for pid 30119
[2026-03-12 04:03:25] 2026-03-12 08:02:33,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 04:03:25] 2026-03-12 08:02:33,470 | INFO     | collected zombie processes
[2026-03-12 04:03:25] 2026-03-12 08:02:33,470 | INFO     | will attempt to kill all subprocesses of pid=30119
[2026-03-12 04:03:25] 2026-03-12 08:02:33,560 | INFO     | process IDs to be killed: [30119] (in reverse order)
[2026-03-12 04:03:25] 2026-03-12 08:02:33,614 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 04:03:25] 2026-03-12 08:02:33,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 04:03:25] 2026-03-12 08:02:33,618 | INFO     | did not find any defunct processes belonging to 30119
[2026-03-12 04:03:25] 2026-03-12 08:02:33,621 | INFO     | did not find any defunct processes belonging to 30119
[2026-03-12 04:03:25] 2026-03-12 08:02:33,621 | INFO     | ready for new job
[2026-03-12 04:03:25] 2026-03-12 08:02:33,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 04:03:25] 2026-03-12 08:02:33,622 | INFO     | **************************************
[2026-03-12 04:03:25] 2026-03-12 08:02:33,623 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 04:03:25] 2026-03-12 08:02:33,623 | INFO     | **************************************
[2026-03-12 04:03:25] 2026-03-12 08:02:33,623 | INFO     | 
[2026-03-12 04:03:25] 2026-03-12 08:02:33,623 | INFO     | architecture information:
[2026-03-12 04:03:25] 2026-03-12 08:02:33,624 | INFO     | executing command: cat /etc/os-release
[2026-03-12 04:03:25] 2026-03-12 08:02:33,638 | INFO     | cat /etc/os-release:
[2026-03-12 04:03:25] NAME="CentOS Linux"
[2026-03-12 04:03:25] VERSION="7 (Core)"
[2026-03-12 04:03:25] ID="centos"
[2026-03-12 04:03:25] ID_LIKE="rhel fedora"
[2026-03-12 04:03:25] VERSION_ID="7"
[2026-03-12 04:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 04:03:25] ANSI_COLOR="0;31"
[2026-03-12 04:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 04:03:25] HOME_URL="https://www.centos.org/"
[2026-03-12 04:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 04:03:25] 
[2026-03-12 04:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 04:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 04:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 04:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 04:03:25] 
[2026-03-12 04:03:25] 2026-03-12 08:02:33,639 | INFO     | **************************************
[2026-03-12 04:03:25] 2026-03-12 08:02:34,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 04:03:25] 2026-03-12 08:02:34,158 | INFO     | sufficient remaining disk space (29155655680 B)
[2026-03-12 04:03:25] 2026-03-12 08:02:34,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 04:03:25] 2026-03-12 08:02:34,158 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 04:03:25] 2026-03-12 08:02:34,158 | INFO     | update_server=False
[2026-03-12 04:03:25] 2026-03-12 08:02:34,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 04:03:25] 2026-03-12 08:02:34,750 | INFO     | all payload control threads have been joined
[2026-03-12 04:03:25] 2026-03-12 08:02:34,813 | INFO     | job.realtimelogging is not enabled
[2026-03-12 04:03:25] 2026-03-12 08:02:34,889 | INFO     | all job control threads have been joined
[2026-03-12 04:03:25] 2026-03-12 08:02:35,156 | INFO     | all data control threads have been joined
[2026-03-12 04:03:25] 2026-03-12 08:02:35,164 | INFO     | [job] retrieve thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 04:03:25] 2026-03-12 08:02:35,215 | WARNING  | process 30119 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 04:03:25] 2026-03-12 08:02:35,287 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:03:25] 2026-03-12 08:02:35,373 | INFO     | number of running child processes to parent process 30119: 1
[2026-03-12 04:03:25] 2026-03-12 08:02:35,373 | INFO     | maximum number of monitored processes: 6
[2026-03-12 04:03:25] 2026-03-12 08:02:35,373 | INFO     | aborting job monitoring since job object (job id=7037105751) has expired
[2026-03-12 04:03:25] 2026-03-12 08:02:35,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:03:25] 2026-03-12 08:02:35,373 | INFO     | will abort loop
[2026-03-12 04:03:25] 2026-03-12 08:02:35,576 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,625 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,679 | INFO     | [payload] failed_post thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,702 | INFO     | [data] copytool_in thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,755 | INFO     | [payload] control thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:35,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 04:03:25] 2026-03-12 08:02:35,896 | INFO     | [job] control thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,063 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,161 | INFO     | [data] control thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,379 | INFO     | [job] job monitor thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,634 | INFO     | [job] validate thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,762 | INFO     | [payload] validate_post thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:36,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:03:25] 2026-03-12 08:02:37,187 | INFO     | [data] copytool_out thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:37,958 | INFO     | [job] queue monitor thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:02:39,861 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 04:03:25] 2026-03-12 08:03:03,969 | INFO     | PID=25729 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 04:03:25] 2026-03-12 08:03:03,969 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 04:03:25] 2026-03-12 08:03:03,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 04:03:25] 2026-03-12 08:03:03,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 04:03:25] 2026-03-12 08:03:19,573 | INFO     | [monitor] cgroup control has ended
[2026-03-12 04:03:25] 2026-03-12 08:03:20,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144843941696)>', '<ExcThread(monitor, started 140143935596288)>']
[2026-03-12 04:03:25] 2026-03-12 08:03:21,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 04:03:25] 2026-03-12 08:03:21,051 | INFO     | [monitor] control thread has ended
[2026-03-12 04:03:25] 2026-03-12 08:03:25,336 | INFO     | all workflow threads have been joined
[2026-03-12 04:03:25] 2026-03-12 08:03:25,341 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 04:03:25] 2026-03-12 08:03:25,342 | INFO     | traces error code: 0
[2026-03-12 04:03:25] 2026-03-12 08:03:25,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 04:03:25] 2026-03-12 08:03:25,445 [wrapper] ==== pilot stdout END ====
[2026-03-12 04:03:25] 2026-03-12 08:03:25,449 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 04:03:25] 2026-03-12 08:03:25,453 [wrapper] pilotpid: 25729
[2026-03-12 04:03:25] 2026-03-12 08:03:25,457 [wrapper] Pilot exit status: 0
[2026-03-12 04:03:25] 2026-03-12 08:03:25,472 [wrapper] pandaids: 7037105751
[2026-03-12 04:03:25] 2026-03-12 08:03:25,520 [wrapper] cleanup supervisor_pilot 19858 25730
[2026-03-12 04:03:25] 2026-03-12 08:03:25,524 [wrapper] Test setup, not cleaning
[2026-03-12 04:03:25] 2026-03-12 08:03:25,528 [wrapper] apfmon messages muted
[2026-03-12 04:03:25] 2026-03-12 08:03:25,532 [wrapper] ==== wrapper stdout END ====
[2026-03-12 04:03:25] 2026-03-12 08:03:25,536 [wrapper] ==== wrapper stderr END ====
[2026-03-12 04:03:25]  *** Error codes and diagnostics ***
[2026-03-12 04:03:25]     "exeErrorCode": 0,
[2026-03-12 04:03:25]     "exeErrorDiag": "",
[2026-03-12 04:03:25]     "pilotErrorCode": 0,
[2026-03-12 04:03:25]     "pilotErrorDiag": "",
[2026-03-12 04:03:25]  *** Listing of results directory ***
[2026-03-12 04:03:25] total 514384
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 21:44 queuedata.json
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 21:44 pilot3.tar.gz
[2026-03-12 04:03:25] -rwx------ 1 boincer umatlas     36322 Mar  3 21:44 runpilot2-wrapper.sh
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas       100 Mar 12 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 04:03:25] -rwxr-xr-x 1 boincer umatlas      7986 Mar 12 02:37 run_atlas
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas       105 Mar 12 02:37 job.xml
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas 291418787 Mar 12 02:37 EVNT.48220197._000392.pool.root.1
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 02:37 start_atlas.sh
[2026-03-12 04:03:25] drwxrwx--x 2 boincer umatlas      4096 Mar 12 02:37 shared
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas    597973 Mar 12 02:37 input.tar.gz
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas         0 Mar 12 02:37 boinc_lockfile
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas      2566 Mar 12 02:37 pandaJob.out
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas        57 Mar 12 02:37 setup.sh.local
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas   1006243 Mar 12 02:38 agis_schedconf.cvmfs.json
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas   1511578 Mar 12 02:38 agis_ddmendpoints.agis.ALL.json
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas       445 Mar 12 02:38 workernode_map.json
[2026-03-12 04:03:25] drwx------ 5 boincer umatlas      4096 Mar 12 02:38 pilot3
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas      5951 Mar 12 04:00 init_data.xml
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas 229157176 Mar 12 04:01 HITS.48838577._009861.pool.root.1
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas        95 Mar 12 04:02 pilot_heartbeat.json
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas       529 Mar 12 04:02 boinc_task_state.xml
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas      1045 Mar 12 04:02 memory_monitor_summary.json
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas    375341 Mar 12 04:02 log.48838577._009861.job.log.tgz.1
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas      6433 Mar 12 04:02 heartbeat.json
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 04:03 boinc_mmap_file
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas        27 Mar 12 04:03 wrapper_checkpoint.txt
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas      5331 Mar 12 04:03 pilotlog.txt
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas    729427 Mar 12 04:03 log.48838577._009861.job.log.1
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas       357 Mar 12 04:03 output.list
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas       620 Mar 12 04:03 runtime_log
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas   1126400 Mar 12 04:03 result.tar.gz
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas      9343 Mar 12 04:03 runtime_log.err
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas       659 Mar 12 04:03 97SNDmGPrH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmh7GLDmix7Cvn.diag
[2026-03-12 04:03:25] -rw-r--r-- 1 boincer umatlas     21424 Mar 12 04:03 stderr.txt
[2026-03-12 04:03:25] HITS file was successfully produced:
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas 229157176 Mar 12 04:01 shared/HITS.pool.root.1
[2026-03-12 04:03:25]  *** Contents of shared directory: ***
[2026-03-12 04:03:25] total 510084
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas 291418787 Mar 12 02:37 ATLAS.root_0
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas     15845 Mar 12 02:37 start_atlas.sh
[2026-03-12 04:03:25] -rw-r--r-- 2 boincer umatlas    597973 Mar 12 02:37 input.tar.gz
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas 229157176 Mar 12 04:01 HITS.pool.root.1
[2026-03-12 04:03:25] -rw------- 1 boincer umatlas   1126400 Mar 12 04:03 result.tar.gz
04:03:27 (21931): run_atlas exited; CPU time 54989.422293
04:03:27 (21931): called boinc_finish(0)

</stderr_txt>
]]>

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