Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:24 (987214): wrapper (7.7.26015): starting
03:04:24 (987214): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 03:04:24] Arguments: --nthreads 4
[2026-03-14 03:04:24] Threads: 4
[2026-03-14 03:04:24] Checking for CVMFS
[2026-03-14 03:04:24] No cvmfs_config command found, will try listing directly
[2026-03-14 03:04:24] CVMFS is ok
[2026-03-14 03:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 03:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 03:04:24] Further information can be found at the LHC@home message board.
[2026-03-14 03:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:04:24] Checking for apptainer binary...
[2026-03-14 03:04:24] which: no apptainer in ((null))
[2026-03-14 03:04:24] apptainer is not installed, using version from CVMFS
[2026-03-14 03:04:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:04:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-14 03:04:24] apptainer works
[2026-03-14 03:04:24] Set ATHENA_PROC_NUMBER=4
[2026-03-14 03:04:24] Set ATHENA_CORE_NUMBER=4
[2026-03-14 03:04:24] Starting ATLAS job with PandaID=7050656212
[2026-03-14 03:04:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 04:48:56]  *** The last 200 lines of the pilot log: ***
[2026-03-14 04:48:56] 2026-03-14 03:47:54,193 | INFO     | job 7050656212 has finished - writing final server update
[2026-03-14 04:48:56] 2026-03-14 03:47:54,193 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1508225/.job.ad'
[2026-03-14 04:48:56] 2026-03-14 03:47:54,193 | INFO     | total number of processed events: 400 (read)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,215 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7050656212/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,215 | INFO     | extracted standard info from prmon json
[2026-03-14 04:48:56] 2026-03-14 03:47:54,215 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 04:48:56] 2026-03-14 03:47:54,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 04:48:56] 2026-03-14 03:47:54,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 04:48:56] 2026-03-14 03:47:54,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 04:48:56] 2026-03-14 03:47:54,217 | INFO     | fitting pss+swap vs Time
[2026-03-14 04:48:56] 2026-03-14 03:47:54,217 | INFO     | sum of square deviations: 329031285.5
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | sum of deviations: 5417685811.499999
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | mean x: 1773456986.5
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | mean y: 2272923.2843137253
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | intersect: -29198697247.275944
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | chi2: 1.9375115896138912
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | sum of deviations: 11260212894.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | mean x: 1773456834.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | mean y: 2291425.06185567
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | intersect: -70567649992.29393
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | chi2: 1.117039724801565
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | current chi2=1.117039724801565 (change=42.346681651376876 %)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,218 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | sum of deviations: 10556862977.500002
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | mean x: 1773456681.5
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | mean y: 2288841.097826087
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | intersect: -77544689029.91432
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | chi2: 1.1188267941616363
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | current chi2=1.1188267941616363 (change=-0.1599826147981162 %)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | right removable region: 91
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | sum of deviations: -4507253400.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | mean x: 1773457139.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | mean y: 2304804.6082474226
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | intersect: 28250142220.15481
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | chi2: 0.8544889299142373
[2026-03-14 04:48:56] 2026-03-14 03:47:54,219 | INFO     | current chi2=0.8544889299142373 (change=55.89760936168023 %)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | sum of deviations: -4667250574.5
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | mean x: 1773457291.5
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | mean y: 2305391.054347826
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | intersect: 34286287505.895935
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | chi2: 0.8554739646998217
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | current chi2=0.8554739646998217 (change=-0.11527765323809307 %)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | left removable region: 20
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | sum of square deviations: 110960220.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | sum of deviations: 300074250.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | mean x: 1773457261.0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | mean y: 2330468.5492957747
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | intersect: -4793702357.46375
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | chi2: 0.00011501333503074791
[2026-03-14 04:48:56] 2026-03-14 03:47:54,220 | INFO     | current memory leak: 2.70 B/s (using 71 data points, chi2=0.00)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | could have reported an average CPU frequency of 3563 MHz (7 samples)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | ..............................
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . Timing measurements:
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . get job = 0 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . initial setup = 6 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . payload setup = 7 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . stage-in = 0 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . payload execution = 6169 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . stage-out = 0 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | . log creation = 0 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,221 | INFO     | ..............................
[2026-03-14 04:48:56] 2026-03-14 03:47:54,262 | INFO     | time since job start (6194s) is within the limit (345600.0s)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | 
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | job summary report
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | --------------------------------------------------
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | PanDA job id: 7050656212
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | task id: 48967085
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | errors: (none)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 04:48:56] 2026-03-14 03:47:54,320 | INFO     | pilot state: finished 
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | transexitcode: 0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | exeerrorcode: 0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | exeerrordiag: 
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | exitcode: 0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | exitmsg: OK
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | cpuconsumptiontime: 23460 s
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | nevents: 400
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | neventsw: 0
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | pid: 1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | pgrp: 1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | corecount: 4
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | event service: False
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | sizes: {0: 2280254, 11: 2280254, 6179: 2306984, 6180: 2316062, 6182: 2316200}
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | --------------------------------------------------
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | 
[2026-03-14 04:48:56] 2026-03-14 03:47:54,321 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-14 04:48:56] 2026-03-14 03:47:54,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | job 7050656212 has completed (purged errors)
[2026-03-14 04:48:56] 2026-03-14 03:47:54,342 | INFO     | overall cleanup function is called
[2026-03-14 04:48:56] 2026-03-14 03:47:55,349 | INFO     | --- collectZombieJob: --- 10, [1000928]
[2026-03-14 04:48:56] 2026-03-14 03:47:55,349 | INFO     | zombie collector waiting for pid 1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:55,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 04:48:56] 2026-03-14 03:47:55,350 | INFO     | collected zombie processes
[2026-03-14 04:48:56] 2026-03-14 03:47:55,350 | INFO     | will attempt to kill all subprocesses of pid=1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:55,855 | INFO     | process IDs to be killed: [1000928] (in reverse order)
[2026-03-14 04:48:56] 2026-03-14 03:47:56,129 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 04:48:56] 2026-03-14 03:47:56,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 04:48:56] 2026-03-14 03:47:56,164 | INFO     | did not find any defunct processes belonging to 1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:56,194 | INFO     | did not find any defunct processes belonging to 1000928
[2026-03-14 04:48:56] 2026-03-14 03:47:56,194 | INFO     | ready for new job
[2026-03-14 04:48:56] 2026-03-14 03:47:56,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 04:48:56] 2026-03-14 03:47:56,195 | INFO     | **************************************
[2026-03-14 04:48:56] 2026-03-14 03:47:56,195 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 04:48:56] 2026-03-14 03:47:56,195 | INFO     | **************************************
[2026-03-14 04:48:56] 2026-03-14 03:47:56,196 | INFO     | 
[2026-03-14 04:48:56] 2026-03-14 03:47:56,201 | INFO     | architecture information:
[2026-03-14 04:48:56] 2026-03-14 03:47:56,202 | INFO     | executing command: cat /etc/os-release
[2026-03-14 04:48:56] 2026-03-14 03:47:56,222 | INFO     | cat /etc/os-release:
[2026-03-14 04:48:56] NAME="CentOS Linux"
[2026-03-14 04:48:56] VERSION="7 (Core)"
[2026-03-14 04:48:56] ID="centos"
[2026-03-14 04:48:56] ID_LIKE="rhel fedora"
[2026-03-14 04:48:56] VERSION_ID="7"
[2026-03-14 04:48:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 04:48:56] ANSI_COLOR="0;31"
[2026-03-14 04:48:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 04:48:56] HOME_URL="https://www.centos.org/"
[2026-03-14 04:48:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 04:48:56] 
[2026-03-14 04:48:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 04:48:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 04:48:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 04:48:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 04:48:56] 
[2026-03-14 04:48:56] 2026-03-14 03:47:56,222 | INFO     | **************************************
[2026-03-14 04:48:56] 2026-03-14 03:47:56,725 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-14 04:48:56] 2026-03-14 03:47:56,742 | INFO     | sufficient remaining disk space (20472397824 B)
[2026-03-14 04:48:56] 2026-03-14 03:47:56,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 04:48:56] 2026-03-14 03:47:56,743 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 04:48:56] 2026-03-14 03:47:56,743 | INFO     | update_server=False
[2026-03-14 04:48:56] 2026-03-14 03:47:56,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 04:48:56] 2026-03-14 03:47:57,094 | INFO     | all payload control threads have been joined
[2026-03-14 04:48:56] 2026-03-14 03:47:57,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 04:48:56] 2026-03-14 03:47:57,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:48:56] 2026-03-14 03:47:57,495 | INFO     | aborting loop
[2026-03-14 04:48:56] 2026-03-14 03:47:57,695 | INFO     | all data control threads have been joined
[2026-03-14 04:48:56] 2026-03-14 03:47:57,747 | INFO     | [job] retrieve thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,099 | INFO     | [payload] control thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,142 | INFO     | [job] validate thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,351 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 04:48:56] 2026-03-14 03:47:58,414 | INFO     | all job control threads have been joined
[2026-03-14 04:48:56] 2026-03-14 03:47:58,478 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,500 | INFO     | [job] job monitor thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,696 | INFO     | [payload] validate_post thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,700 | INFO     | [data] control thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,713 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:58,878 | INFO     | [data] copytool_in thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:59,150 | INFO     | [payload] failed_post thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:59,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:48:56] 2026-03-14 03:47:59,378 | INFO     | [data] copytool_out thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:47:59,421 | INFO     | [job] control thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:48:00,294 | INFO     | [job] queue monitor thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:48:02,379 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 04:48:56] 2026-03-14 03:48:28,043 | INFO     | PID=991800 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 04:48:56] 2026-03-14 03:48:28,043 | INFO     | .. there are 49 such processes running
[2026-03-14 04:48:56] 2026-03-14 03:48:28,044 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 04:48:56] 2026-03-14 03:48:28,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 04:48:56] 2026-03-14 03:48:28,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 04:48:56] 2026-03-14 03:48:50,796 | INFO     | [monitor] cgroup control has ended
[2026-03-14 04:48:56] 2026-03-14 03:48:51,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22645743933248)>', '<ExcThread(monitor, started 22645503698688)>']
[2026-03-14 04:48:56] 2026-03-14 03:48:51,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 04:48:56] 2026-03-14 03:48:51,159 | INFO     | [monitor] control thread has ended
[2026-03-14 04:48:56] 2026-03-14 03:48:56,173 | INFO     | all workflow threads have been joined
[2026-03-14 04:48:56] 2026-03-14 03:48:56,173 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 04:48:56] 2026-03-14 03:48:56,173 | INFO     | traces error code: 0
[2026-03-14 04:48:56] 2026-03-14 03:48:56,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 04:48:56] 2026-03-14 03:48:56,334 [wrapper] ==== pilot stdout END ====
[2026-03-14 04:48:56] 2026-03-14 03:48:56,337 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 04:48:56] 2026-03-14 03:48:56,339 [wrapper] pilotpid: 991800
[2026-03-14 04:48:56] 2026-03-14 03:48:56,345 [wrapper] Pilot exit status: 0
[2026-03-14 04:48:56] 2026-03-14 03:48:56,355 [wrapper] pandaids: 7050656212
[2026-03-14 04:48:56] 2026-03-14 03:48:56,491 [wrapper] cleanup supervisor_pilot 1672606 991801
[2026-03-14 04:48:56] 2026-03-14 03:48:56,498 [wrapper] Test setup, not cleaning
[2026-03-14 04:48:56] 2026-03-14 03:48:56,516 [wrapper] apfmon messages muted
[2026-03-14 04:48:56] 2026-03-14 03:48:56,519 [wrapper] ==== wrapper stdout END ====
[2026-03-14 04:48:56] 2026-03-14 03:48:56,532 [wrapper] ==== wrapper stderr END ====
[2026-03-14 04:48:56]  *** Error codes and diagnostics ***
[2026-03-14 04:48:56]     "exeErrorCode": 0,
[2026-03-14 04:48:56]     "exeErrorDiag": "",
[2026-03-14 04:48:56]     "pilotErrorCode": 0,
[2026-03-14 04:48:56]     "pilotErrorDiag": "",
[2026-03-14 04:48:56]  *** Listing of results directory ***
[2026-03-14 04:48:56] total 406464
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc      5111 Mar 12 02:25 queuedata.json
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-14 04:48:56] -rwx------. 1 boinc boinc     36322 Mar 12 02:25 runpilot2-wrapper.sh
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc       100 Mar 14 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 04:48:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 03:04 run_atlas
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc       105 Mar 14 03:04 job.xml
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc      6709 Mar 14 03:04 init_data.xml
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc 211267985 Mar 14 03:04 EVNT.48967083._000532.pool.root.1
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:04 start_atlas.sh
[2026-03-14 04:48:56] drwxrwx--x. 2 boinc boinc      4096 Mar 14 03:04 shared
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc    597520 Mar 14 03:04 input.tar.gz
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc         0 Mar 14 03:04 boinc_lockfile
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc      2563 Mar 14 03:04 pandaJob.out
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc   1006713 Mar 14 03:04 agis_schedconf.cvmfs.json
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc   1511579 Mar 14 03:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc       442 Mar 14 03:04 workernode_map.json
[2026-03-14 04:48:56] drwx------. 5 boinc boinc      4096 Mar 14 03:04 pilot3
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc 198650868 Mar 14 04:47 HITS.48967085._012946.pool.root.1
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc       529 Mar 14 04:47 boinc_task_state.xml
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc      1043 Mar 14 04:47 memory_monitor_summary.json
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc    288352 Mar 14 04:47 log.48967085._012946.job.log.tgz.1
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc      6350 Mar 14 04:47 heartbeat.json
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc        95 Mar 14 04:48 pilot_heartbeat.json
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc        27 Mar 14 04:48 wrapper_checkpoint.txt
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc      8192 Mar 14 04:48 boinc_mmap_file
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc      4829 Mar 14 04:48 pilotlog.txt
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc    891235 Mar 14 04:48 log.48967085._012946.job.log.1
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc       357 Mar 14 04:48 output.list
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc       620 Mar 14 04:48 runtime_log
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc   1198080 Mar 14 04:48 result.tar.gz
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc       663 Mar 14 04:48 vpLLDmtyjK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpalLDmfiNWvm.diag
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc      9221 Mar 14 04:48 runtime_log.err
[2026-03-14 04:48:56] -rw-r--r--. 1 boinc boinc     20871 Mar 14 04:48 stderr.txt
[2026-03-14 04:48:56] HITS file was successfully produced:
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc 198650868 Mar 14 04:47 shared/HITS.pool.root.1
[2026-03-14 04:48:56]  *** Contents of shared directory: ***
[2026-03-14 04:48:56] total 402096
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc 211267985 Mar 14 03:04 ATLAS.root_0
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc     15845 Mar 14 03:04 start_atlas.sh
[2026-03-14 04:48:56] -rw-r--r--. 2 boinc boinc    597520 Mar 14 03:04 input.tar.gz
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc 198650868 Mar 14 04:47 HITS.pool.root.1
[2026-03-14 04:48:56] -rw-------. 1 boinc boinc   1198080 Mar 14 04:48 result.tar.gz
04:48:58 (987214): run_atlas exited; CPU time 23751.488724
04:48:58 (987214): called boinc_finish(0)

</stderr_txt>
]]>

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