Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:12:16 (545020): wrapper (7.7.26015): starting
02:12:16 (545020): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 02:12:16] Arguments: --nthreads 8
[2026-03-12 02:12:16] Threads: 8
[2026-03-12 02:12:16] Checking for CVMFS
[2026-03-12 02:12:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 02:12:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 02:12:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 02:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 02:12:19] 2.13.3.0 8127 33771 247172 157185 1 833 25510296 40960001 64144 16776704 0 315423210 99.769 183698964 37690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 02:12:19] CVMFS is ok
[2026-03-12 02:12:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 02:12:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 02:12:19] Further information can be found at the LHC@home message board.
[2026-03-12 02:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 02:12:19] Checking for apptainer binary...
[2026-03-12 02:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 02:12:19] Running /usr/bin/apptainer --version
[2026-03-12 02:12:19] apptainer version 1.4.5-2.el9
[2026-03-12 02:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 02:12:21] c8-6-11.aglt2.org
[2026-03-12 02:12:21] apptainer works
[2026-03-12 02:12:21] Set ATHENA_PROC_NUMBER=8
[2026-03-12 02:12:21] Set ATHENA_CORE_NUMBER=8
[2026-03-12 02:12:21] Starting ATLAS job with PandaID=7037041038
[2026-03-12 02:12:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 04:41:20]  *** The last 200 lines of the pilot log: ***
[2026-03-12 04:41:20] 2026-03-12 08:40:13,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 04:41:20] 2026-03-12 08:40:13,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 04:41:20] 2026-03-12 08:40:13,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 04:41:20] 2026-03-12 08:40:13,561 | INFO     | fitting pss+swap vs Time
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | sum of square deviations: 814908034.666665
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | sum of deviations: 79286415978.33325
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | mean x: 1773300599.6666667
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | mean y: 2327660.6811594204
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | intersect: -172530820889.40094
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | chi2: 11.923593642229083
[2026-03-12 04:41:20] 2026-03-12 08:40:13,562 | INFO     | sum of square deviations: 729492201.6842104
[2026-03-12 04:41:20] 2026-03-12 08:40:13,563 | INFO     | sum of deviations: 94277574954.36842
[2026-03-12 04:41:20] 2026-03-12 08:40:13,563 | INFO     | mean x: 1773300447.1578948
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | mean y: 2353720.172932331
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | intersect: -229174141158.81552
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | chi2: 10.547976945859107
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | current chi2=10.547976945859107 (change=11.536930372216275 %)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | right removable region: 132
[2026-03-12 04:41:20] 2026-03-12 08:40:13,583 | INFO     | sum of square deviations: 729494767.0225564
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | sum of deviations: 32915580791.082672
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | mean x: 1773300752.1729324
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | mean y: 2410395.30075188
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | intersect: -80010808086.40361
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | chi2: 6.212212618103463
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | current chi2=6.212212618103463 (change=47.8998294935007 %)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | sum of square deviations: 650267661.8671875
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | sum of deviations: -6456435446.3046875
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | mean x: 1773300904.6796875
[2026-03-12 04:41:20] 2026-03-12 08:40:13,584 | INFO     | mean y: 2486148.3828125
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | intersect: 17609394025.46024
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | chi2: 2.5962349385070778
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | current chi2=2.5962349385070778 (change=58.20756470985555 %)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | sum of square deviations: 577001964.065039
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | sum of deviations: -23790548178.13008
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | mean x: 1773301057.1788619
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | mean y: 2521818.6422764226
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | intersect: 73118051509.26106
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | chi2: 1.7176771833082616
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | current chi2=1.7176771833082616 (change=33.83968616122301 %)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,585 | INFO     | sum of square deviations: 509457425.76271206
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | sum of deviations: -25154252476.898315
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | mean x: 1773301209.677966
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | mean y: 2524762.9237288134
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | intersect: 87558548269.79227
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | chi2: 1.6844471399958567
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | current chi2=1.6844471399958567 (change=1.9345918799715034 %)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | left removable region: 40
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | sum of square deviations: 241436624.2173913
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | sum of deviations: -1263486099.2173908
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | mean x: 1773301636.673913
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | mean y: 2541361.3260869565
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | intersect: 9282583173.207687
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | chi2: 0.005747187611168535
[2026-03-12 04:41:20] 2026-03-12 08:40:13,586 | INFO     | current memory leak: -5.23 B/s (using 92 data points, chi2=0.01)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,587 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | ..............................
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . Timing measurements:
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . get job = 1 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . initial setup = 88 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . payload setup = 117 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . stage-in = 0 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . payload execution = 8457 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . stage-out = 5 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | . log creation = 1 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,597 | INFO     | ..............................
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | 
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | job summary report
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | --------------------------------------------------
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | PanDA job id: 7037041038
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | task id: 48838577
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | errors: (none)
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | pilot state: finished 
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | transexitcode: 0
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | exeerrorcode: 0
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | exeerrordiag: 
[2026-03-12 04:41:20] 2026-03-12 08:40:13,830 | INFO     | exitcode: 0
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | exitmsg: OK
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | cpuconsumptiontime: 26613 s
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | nevents: 400
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | neventsw: 0
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | pid: 622471
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | pgrp: 622471
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | corecount: 8
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | event service: False
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | sizes: {0: 2279150, 1: 2280268, 12: 2280268, 8579: 2308104, 8585: 2317102, 8586: 2317158, 8588: 2317480}
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | --------------------------------------------------
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | 
[2026-03-12 04:41:20] 2026-03-12 08:40:13,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | job 7037041038 has completed (purged errors)
[2026-03-12 04:41:20] 2026-03-12 08:40:14,136 | INFO     | overall cleanup function is called
[2026-03-12 04:41:20] 2026-03-12 08:40:15,162 | INFO     | --- collectZombieJob: --- 10, [622471]
[2026-03-12 04:41:20] 2026-03-12 08:40:15,162 | INFO     | zombie collector waiting for pid 622471
[2026-03-12 04:41:20] 2026-03-12 08:40:15,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 04:41:20] 2026-03-12 08:40:15,162 | INFO     | collected zombie processes
[2026-03-12 04:41:20] 2026-03-12 08:40:15,162 | INFO     | will attempt to kill all subprocesses of pid=622471
[2026-03-12 04:41:20] 2026-03-12 08:40:17,680 | INFO     | process IDs to be killed: [622471] (in reverse order)
[2026-03-12 04:41:20] 2026-03-12 08:40:18,650 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 04:41:20] 2026-03-12 08:40:18,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 04:41:20] 2026-03-12 08:40:18,693 | INFO     | did not find any defunct processes belonging to 622471
[2026-03-12 04:41:20] 2026-03-12 08:40:18,768 | INFO     | did not find any defunct processes belonging to 622471
[2026-03-12 04:41:20] 2026-03-12 08:40:18,769 | INFO     | ready for new job
[2026-03-12 04:41:20] 2026-03-12 08:40:18,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 04:41:20] 2026-03-12 08:40:18,770 | INFO     | **************************************
[2026-03-12 04:41:20] 2026-03-12 08:40:18,770 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 04:41:20] 2026-03-12 08:40:18,770 | INFO     | **************************************
[2026-03-12 04:41:20] 2026-03-12 08:40:18,770 | INFO     | 
[2026-03-12 04:41:20] 2026-03-12 08:40:18,779 | INFO     | architecture information:
[2026-03-12 04:41:20] 2026-03-12 08:40:18,785 | INFO     | executing command: cat /etc/os-release
[2026-03-12 04:41:20] 2026-03-12 08:40:19,024 | INFO     | cat /etc/os-release:
[2026-03-12 04:41:20] NAME="CentOS Linux"
[2026-03-12 04:41:20] VERSION="7 (Core)"
[2026-03-12 04:41:20] ID="centos"
[2026-03-12 04:41:20] ID_LIKE="rhel fedora"
[2026-03-12 04:41:20] VERSION_ID="7"
[2026-03-12 04:41:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 04:41:20] ANSI_COLOR="0;31"
[2026-03-12 04:41:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 04:41:20] HOME_URL="https://www.centos.org/"
[2026-03-12 04:41:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 04:41:20] 
[2026-03-12 04:41:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 04:41:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 04:41:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 04:41:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 04:41:20] 
[2026-03-12 04:41:20] 2026-03-12 08:40:19,025 | INFO     | **************************************
[2026-03-12 04:41:20] 2026-03-12 08:40:19,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-12 04:41:20] 2026-03-12 08:40:19,746 | INFO     | sufficient remaining disk space (168527134720 B)
[2026-03-12 04:41:20] 2026-03-12 08:40:19,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 04:41:20] 2026-03-12 08:40:19,746 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 04:41:20] 2026-03-12 08:40:19,746 | INFO     | update_server=False
[2026-03-12 04:41:20] 2026-03-12 08:40:19,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 04:41:20] 2026-03-12 08:40:19,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:41:20] 2026-03-12 08:40:19,999 | INFO     | all payload control threads have been joined
[2026-03-12 04:41:20] 2026-03-12 08:40:20,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:41:20] 2026-03-12 08:40:20,217 | INFO     | aborting loop
[2026-03-12 04:41:20] 2026-03-12 08:40:20,300 | INFO     | all job control threads have been joined
[2026-03-12 04:41:20] 2026-03-12 08:40:20,598 | INFO     | all data control threads have been joined
[2026-03-12 04:41:20] 2026-03-12 08:40:20,759 | INFO     | [job] retrieve thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:20,759 | INFO     | [job] queue monitor thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:20,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 04:41:20] 2026-03-12 08:40:21,005 | INFO     | [payload] control thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,053 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,055 | INFO     | [job] validate thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,071 | INFO     | [data] copytool_in thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,223 | INFO     | [job] job monitor thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,306 | INFO     | [job] control thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,488 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,606 | INFO     | [data] control thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,798 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:21,904 | INFO     | [payload] failed_post thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:22,150 | INFO     | [payload] validate_post thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:22,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 04:41:20] 2026-03-12 08:40:22,874 | INFO     | [data] copytool_out thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:26,168 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 04:41:20] 2026-03-12 08:40:52,723 | INFO     | PID=578280 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 04:41:20] 2026-03-12 08:40:52,731 | INFO     | .. there are 108 such processes running
[2026-03-12 04:41:20] 2026-03-12 08:40:52,731 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 04:41:20] 2026-03-12 08:40:52,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 04:41:20] 2026-03-12 08:40:52,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 04:41:20] 2026-03-12 08:41:07,942 | INFO     | [monitor] cgroup control has ended
[2026-03-12 04:41:20] 2026-03-12 08:41:09,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651525244736)>', '<ExcThread(monitor, started 140651161175808)>']
[2026-03-12 04:41:20] 2026-03-12 08:41:09,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 04:41:20] 2026-03-12 08:41:09,893 | INFO     | [monitor] control thread has ended
[2026-03-12 04:41:20] 2026-03-12 08:41:14,289 | INFO     | all workflow threads have been joined
[2026-03-12 04:41:20] 2026-03-12 08:41:14,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 04:41:20] 2026-03-12 08:41:14,289 | INFO     | traces error code: 0
[2026-03-12 04:41:20] 2026-03-12 08:41:14,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 04:41:20] 2026-03-12 08:41:15,061 [wrapper] ==== pilot stdout END ====
[2026-03-12 04:41:20] 2026-03-12 08:41:15,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 04:41:20] 2026-03-12 08:41:15,259 [wrapper] pilotpid: 578280
[2026-03-12 04:41:20] 2026-03-12 08:41:15,297 [wrapper] Pilot exit status: 0
[2026-03-12 04:41:20] 2026-03-12 08:41:15,648 [wrapper] pandaids: 7037041038
[2026-03-12 04:41:20] 2026-03-12 08:41:18,121 [wrapper] cleanup supervisor_pilot 1839397 578281
[2026-03-12 04:41:20] 2026-03-12 08:41:18,276 [wrapper] Test setup, not cleaning
[2026-03-12 04:41:20] 2026-03-12 08:41:18,292 [wrapper] apfmon messages muted
[2026-03-12 04:41:20] 2026-03-12 08:41:18,393 [wrapper] ==== wrapper stdout END ====
[2026-03-12 04:41:20] 2026-03-12 08:41:18,466 [wrapper] ==== wrapper stderr END ====
[2026-03-12 04:41:20]  *** Error codes and diagnostics ***
[2026-03-12 04:41:20]     "exeErrorCode": 0,
[2026-03-12 04:41:20]     "exeErrorDiag": "",
[2026-03-12 04:41:20]     "pilotErrorCode": 0,
[2026-03-12 04:41:20]     "pilotErrorDiag": "",
[2026-03-12 04:41:20]  *** Listing of results directory ***
[2026-03-12 04:41:20] total 511340
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 20:08 pilot3.tar.gz
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 20:22 queuedata.json
[2026-03-12 04:41:20] -rwx------. 1 boincer umatlas     36322 Mar  3 20:22 runpilot2-wrapper.sh
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas       100 Mar 12 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 04:41:20] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 02:12 run_atlas
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas       105 Mar 12 02:12 job.xml
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas 290067716 Mar 12 02:12 EVNT.48220197._000357.pool.root.1
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 02:12 start_atlas.sh
[2026-03-12 04:41:20] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 02:12 shared
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas    597971 Mar 12 02:12 input.tar.gz
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas         0 Mar 12 02:12 boinc_lockfile
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas      2567 Mar 12 02:12 pandaJob.out
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas        57 Mar 12 02:12 setup.sh.local
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas   1511578 Mar 12 02:15 agis_ddmendpoints.agis.ALL.json
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas       430 Mar 12 02:16 workernode_map.json
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas   1006243 Mar 12 02:16 agis_schedconf.cvmfs.json
[2026-03-12 04:41:20] drwx------. 5 boincer umatlas      4096 Mar 12 02:16 pilot3
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas      7183 Mar 12 04:37 init_data.xml
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas 226892274 Mar 12 04:38 HITS.48838577._008996.pool.root.1
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas       529 Mar 12 04:38 boinc_task_state.xml
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas        95 Mar 12 04:40 pilot_heartbeat.json
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas      1043 Mar 12 04:40 memory_monitor_summary.json
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas    367795 Mar 12 04:40 log.48838577._008996.job.log.tgz.1
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas      6356 Mar 12 04:40 heartbeat.json
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas      4821 Mar 12 04:41 pilotlog.txt
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 04:41 boinc_mmap_file
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas        27 Mar 12 04:41 wrapper_checkpoint.txt
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas    989263 Mar 12 04:41 log.48838577._008996.job.log.1
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas       357 Mar 12 04:41 output.list
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas       620 Mar 12 04:41 runtime_log
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas   1372160 Mar 12 04:41 result.tar.gz
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas      9336 Mar 12 04:41 runtime_log.err
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas       656 Mar 12 04:41 lCRKDmk7pH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEpILDmcN9pkm.diag
[2026-03-12 04:41:20] -rw-r--r--. 1 boincer umatlas     20969 Mar 12 04:41 stderr.txt
[2026-03-12 04:41:20] HITS file was successfully produced:
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas 226892274 Mar 12 04:38 shared/HITS.pool.root.1
[2026-03-12 04:41:20]  *** Contents of shared directory: ***
[2026-03-12 04:41:20] total 506796
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas 290067716 Mar 12 02:12 ATLAS.root_0
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 02:12 start_atlas.sh
[2026-03-12 04:41:20] -rw-r--r--. 2 boincer umatlas    597971 Mar 12 02:12 input.tar.gz
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas 226892274 Mar 12 04:38 HITS.pool.root.1
[2026-03-12 04:41:20] -rw-------. 1 boincer umatlas   1372160 Mar 12 04:41 result.tar.gz
04:41:21 (545020): run_atlas exited; CPU time 27026.943360
04:41:21 (545020): called boinc_finish(0)

</stderr_txt>
]]>

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