Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
03:21:28 (1293792): wrapper (7.7.26015): starting
03:21:28 (1293792): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 03:21:28] Arguments: --nthreads 4
[2026-03-12 03:21:28] Threads: 4
[2026-03-12 03:21:28] Checking for CVMFS
[2026-03-12 03:21:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 03:21:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 03:21:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 03:21:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 03:21:28] 2.13.3.0 1760492 8486 50432 157188 3 50 3743659 4096001 1832 130560 0 6652611 99.991 299791 842 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 03:21:28] CVMFS is ok
[2026-03-12 03:21:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 03:21:28] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 03:21:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 03:21:28] Further information can be found at the LHC@home message board.
[2026-03-12 03:21:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 03:21:28] Checking for apptainer binary...
[2026-03-12 03:21:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 03:21:28] Running /usr/bin/apptainer --version
[2026-03-12 03:21:28] apptainer version 1.4.5
[2026-03-12 03:21:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 03:21:29] OptiPlex7070-Ubuntu
[2026-03-12 03:21:29] apptainer works
[2026-03-12 03:21:29] Set ATHENA_PROC_NUMBER=4
[2026-03-12 03:21:29] Set ATHENA_CORE_NUMBER=4
[2026-03-12 03:21:29] Starting ATLAS job with PandaID=7037042359
[2026-03-12 03:21:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 05:48:04]  *** The last 200 lines of the pilot log: ***
[2026-03-12 05:48:04] 2026-03-12 09:47:32,106 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,106 | INFO     | log transfer has been attempted: DONE
[2026-03-12 05:48:04] 2026-03-12 09:47:32,107 | INFO     | job 7037042359 has finished - writing final server update
[2026-03-12 05:48:04] 2026-03-12 09:47:32,107 | INFO     | total number of processed events: 400 (read)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,109 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7037042359/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,110 | INFO     | extracted standard info from prmon json
[2026-03-12 05:48:04] 2026-03-12 09:47:32,110 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 05:48:04] 2026-03-12 09:47:32,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 05:48:04] 2026-03-12 09:47:32,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 05:48:04] 2026-03-12 09:47:32,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 05:48:04] 2026-03-12 09:47:32,113 | INFO     | fitting pss+swap vs Time
[2026-03-12 05:48:04] 2026-03-12 09:47:32,113 | INFO     | sum of square deviations: 925859220.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | sum of deviations: -27132339449.999992
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | mean x: 1773304480.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | mean y: 2381871.1944444445
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | intersect: 51969136723.11663
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | chi2: 2.089671818827423
[2026-03-12 05:48:04] 2026-03-12 09:47:32,114 | INFO     | sum of square deviations: 832722590.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,115 | INFO     | sum of deviations: -17724060448.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,115 | INFO     | mean x: 1773304328.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,115 | INFO     | mean y: 2396897.273381295
[2026-03-12 05:48:04] 2026-03-12 09:47:32,115 | INFO     | intersect: 37746242782.578384
[2026-03-12 05:48:04] 2026-03-12 09:47:32,116 | INFO     | chi2: 1.434043290094235
[2026-03-12 05:48:04] 2026-03-12 09:47:32,116 | INFO     | current chi2=1.434043290094235 (change=31.374712661870536 %)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,116 | INFO     | sum of square deviations: 746051197.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | sum of deviations: -16699384216.999998
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | mean x: 1773304175.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | mean y: 2398701.582089552
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | intersect: 39695502686.29206
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | chi2: 1.4292922589248254
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | current chi2=1.4292922589248254 (change=0.3313031902333622 %)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | right removable region: 133
[2026-03-12 05:48:04] 2026-03-12 09:47:32,117 | INFO     | sum of square deviations: 832722590.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,118 | INFO     | sum of deviations: -40788585374.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,118 | INFO     | mean x: 1773304633.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,118 | INFO     | mean y: 2403622.5323741008
[2026-03-12 05:48:04] 2026-03-12 09:47:32,118 | INFO     | intersect: 86862767789.22351
[2026-03-12 05:48:04] 2026-03-12 09:47:32,119 | INFO     | chi2: 0.8769552499545882
[2026-03-12 05:48:04] 2026-03-12 09:47:32,119 | INFO     | current chi2=0.8769552499545882 (change=58.03382894608426 %)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,119 | INFO     | sum of square deviations: 746051197.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | sum of deviations: -34325649129.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | mean x: 1773304785.5
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | mean y: 2392238.4552238807
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | intersect: 81591749739.26704
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | chi2: 0.8623340505445789
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | current chi2=0.8623340505445789 (change=1.6672685876236462 %)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | left removable region: 20
[2026-03-12 05:48:04] 2026-03-12 09:47:32,120 | INFO     | sum of square deviations: 447383272.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | sum of deviations: -11266717446.000008
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | mean x: 1773304755.0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | mean y: 2381896.1946902657
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | intersect: 44660563975.548935
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | chi2: 0.0873669712647098
[2026-03-12 05:48:04] 2026-03-12 09:47:32,121 | INFO     | current memory leak: -25.18 B/s (using 113 data points, chi2=0.09)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | could have reported an average CPU frequency of 3456 MHz (8 samples)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | ..............................
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . Timing measurements:
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . get job = 0 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . initial setup = 5 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . payload setup = 3 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . stage-in = 0 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,122 | INFO     | . payload execution = 8729 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,123 | INFO     | . stage-out = 0 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,123 | INFO     | . log creation = 0 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,123 | INFO     | ..............................
[2026-03-12 05:48:04] 2026-03-12 09:47:32,194 | INFO     | 
[2026-03-12 05:48:04] 2026-03-12 09:47:32,194 | INFO     | job summary report
[2026-03-12 05:48:04] 2026-03-12 09:47:32,194 | INFO     | --------------------------------------------------
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | PanDA job id: 7037042359
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | task id: 48838586
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | errors: (none)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | pilot state: finished 
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | transexitcode: 0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | exeerrorcode: 0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | exeerrordiag: 
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | exitcode: 0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | exitmsg: OK
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | cpuconsumptiontime: 33734 s
[2026-03-12 05:48:04] 2026-03-12 09:47:32,195 | INFO     | nevents: 400
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | neventsw: 0
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | pid: 1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | pgrp: 1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | corecount: 4
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | event service: False
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | sizes: {0: 2280199, 11: 2280199, 8736: 2308489, 8738: 2317515, 8739: 2317765}
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | --------------------------------------------------
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | 
[2026-03-12 05:48:04] 2026-03-12 09:47:32,196 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-12 05:48:04] 2026-03-12 09:47:32,210 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | job 7037042359 has completed (purged errors)
[2026-03-12 05:48:04] 2026-03-12 09:47:32,212 | INFO     | overall cleanup function is called
[2026-03-12 05:48:04] 2026-03-12 09:47:33,215 | INFO     | --- collectZombieJob: --- 10, [1302499]
[2026-03-12 05:48:04] 2026-03-12 09:47:33,215 | INFO     | zombie collector waiting for pid 1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:33,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 05:48:04] 2026-03-12 09:47:33,215 | INFO     | collected zombie processes
[2026-03-12 05:48:04] 2026-03-12 09:47:33,215 | INFO     | will attempt to kill all subprocesses of pid=1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:33,353 | INFO     | process IDs to be killed: [1302499] (in reverse order)
[2026-03-12 05:48:04] 2026-03-12 09:47:33,391 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 05:48:04] 2026-03-12 09:47:33,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 05:48:04] 2026-03-12 09:47:33,394 | INFO     | did not find any defunct processes belonging to 1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:33,397 | INFO     | did not find any defunct processes belonging to 1302499
[2026-03-12 05:48:04] 2026-03-12 09:47:33,397 | INFO     | ready for new job
[2026-03-12 05:48:04] 2026-03-12 09:47:33,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 05:48:04] 2026-03-12 09:47:33,398 | INFO     | **************************************
[2026-03-12 05:48:04] 2026-03-12 09:47:33,398 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 05:48:04] 2026-03-12 09:47:33,399 | INFO     | **************************************
[2026-03-12 05:48:04] 2026-03-12 09:47:33,399 | INFO     | 
[2026-03-12 05:48:04] 2026-03-12 09:47:33,399 | INFO     | architecture information:
[2026-03-12 05:48:04] 2026-03-12 09:47:33,400 | INFO     | executing command: cat /etc/os-release
[2026-03-12 05:48:04] 2026-03-12 09:47:33,410 | INFO     | cat /etc/os-release:
[2026-03-12 05:48:04] NAME="CentOS Linux"
[2026-03-12 05:48:04] VERSION="7 (Core)"
[2026-03-12 05:48:04] ID="centos"
[2026-03-12 05:48:04] ID_LIKE="rhel fedora"
[2026-03-12 05:48:04] VERSION_ID="7"
[2026-03-12 05:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 05:48:04] ANSI_COLOR="0;31"
[2026-03-12 05:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 05:48:04] HOME_URL="https://www.centos.org/"
[2026-03-12 05:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 05:48:04] 
[2026-03-12 05:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 05:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 05:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 05:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 05:48:04] 
[2026-03-12 05:48:04] 2026-03-12 09:47:33,410 | INFO     | **************************************
[2026-03-12 05:48:04] 2026-03-12 09:47:33,913 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-12 05:48:04] 2026-03-12 09:47:33,924 | INFO     | sufficient remaining disk space (410643333120 B)
[2026-03-12 05:48:04] 2026-03-12 09:47:33,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 05:48:04] 2026-03-12 09:47:33,925 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 05:48:04] 2026-03-12 09:47:33,925 | INFO     | update_server=False
[2026-03-12 05:48:04] 2026-03-12 09:47:33,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 05:48:04] 2026-03-12 09:47:33,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 05:48:04] 2026-03-12 09:47:33,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 05:48:04] 2026-03-12 09:47:34,051 | INFO     | all data control threads have been joined
[2026-03-12 05:48:04] 2026-03-12 09:47:34,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 05:48:04] 2026-03-12 09:47:34,103 | INFO     | aborting loop
[2026-03-12 05:48:04] 2026-03-12 09:47:34,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 05:48:04] 2026-03-12 09:47:34,928 | INFO     | [job] queue monitor thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:34,930 | INFO     | [job] retrieve thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:34,945 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,057 | INFO     | [data] control thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,090 | INFO     | all payload control threads have been joined
[2026-03-12 05:48:04] 2026-03-12 09:47:35,108 | INFO     | [job] job monitor thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,108 | INFO     | [data] copytool_in thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,146 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,484 | INFO     | all job control threads have been joined
[2026-03-12 05:48:04] 2026-03-12 09:47:35,491 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:35,751 | INFO     | [payload] failed_post thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,039 | INFO     | [job] validate thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,095 | INFO     | [payload] control thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,120 | INFO     | [data] copytool_out thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,240 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,408 | INFO     | [payload] validate_post thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:36,489 | INFO     | [job] control thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:37,931 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 05:48:04] 2026-03-12 09:47:55,176 | INFO     | [monitor] cgroup control has ended
[2026-03-12 05:48:04] 2026-03-12 09:47:56,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124966092171072)>', '<ExcThread(monitor, started 124965579888384)>']
[2026-03-12 05:48:04] 2026-03-12 09:48:01,844 | INFO     | all workflow threads have been joined
[2026-03-12 05:48:04] 2026-03-12 09:48:01,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 05:48:04] 2026-03-12 09:48:01,844 | INFO     | traces error code: 0
[2026-03-12 05:48:04] 2026-03-12 09:48:01,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 05:48:04] 2026-03-12 09:48:04,225 | INFO     | PID=1297969 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 05:48:04] 2026-03-12 09:48:04,225 | INFO     | .. there are 3 such processes running
[2026-03-12 05:48:04] 2026-03-12 09:48:04,226 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 05:48:04] 2026-03-12 09:48:04,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 05:48:04] 2026-03-12 09:48:04,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 05:48:04] 2026-03-12 09:48:04,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 05:48:04] 2026-03-12 09:48:04,226 | INFO     | [monitor] control thread has ended
[2026-03-12 05:48:04] 2026-03-12 09:48:04,309 [wrapper] ==== pilot stdout END ====
[2026-03-12 05:48:04] 2026-03-12 09:48:04,311 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 05:48:04] 2026-03-12 09:48:04,313 [wrapper] pilotpid: 1297969
[2026-03-12 05:48:04] 2026-03-12 09:48:04,314 [wrapper] Pilot exit status: 0
[2026-03-12 05:48:04] 2026-03-12 09:48:04,320 [wrapper] pandaids: 7037042359
[2026-03-12 05:48:04] 2026-03-12 09:48:04,343 [wrapper] cleanup supervisor_pilot 1358283 1297970
[2026-03-12 05:48:04] 2026-03-12 09:48:04,347 [wrapper] Test setup, not cleaning
[2026-03-12 05:48:04] 2026-03-12 09:48:04,348 [wrapper] apfmon messages muted
[2026-03-12 05:48:04] 2026-03-12 09:48:04,350 [wrapper] ==== wrapper stdout END ====
[2026-03-12 05:48:04] 2026-03-12 09:48:04,352 [wrapper] ==== wrapper stderr END ====
[2026-03-12 05:48:04]  *** Error codes and diagnostics ***
[2026-03-12 05:48:04]     "exeErrorCode": 0,
[2026-03-12 05:48:04]     "exeErrorDiag": "",
[2026-03-12 05:48:04]     "pilotErrorCode": 0,
[2026-03-12 05:48:04]     "pilotErrorDiag": "",
[2026-03-12 05:48:04]  *** Listing of results directory ***
[2026-03-12 05:48:04] total 483724
[2026-03-12 05:48:04] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  3 20:58 pilot3.tar.gz
[2026-03-12 05:48:04] -rwx------ 1 whitlerd whitlerd     36322 Mar  3 20:58 runpilot2-wrapper.sh
[2026-03-12 05:48:04] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  3 20:58 queuedata.json
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 12 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 05:48:04] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 12 03:21 run_atlas
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 12 03:21 job.xml
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 12 03:21 start_atlas.sh
[2026-03-12 05:48:04] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 12 03:21 shared
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd    597953 Mar 12 03:21 input.tar.gz
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd 275556004 Mar 12 03:21 EVNT.48220221._000175.pool.root.1
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 12 03:21 boinc_setup_complete
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 12 03:21 init_data.xml
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 12 03:21 boinc_lockfile
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd      2562 Mar 12 03:21 pandaJob.out
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd   1006243 Mar 12 03:21 agis_schedconf.cvmfs.json
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd   1511578 Mar 12 03:21 agis_ddmendpoints.agis.ALL.json
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd       433 Mar 12 03:21 workernode_map.json
[2026-03-12 05:48:04] drwx------ 5 whitlerd whitlerd      4096 Mar 12 03:21 pilot3
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd 212615399 Mar 12 05:46 HITS.48838586._004343.pool.root.1
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 12 05:46 boinc_task_state.xml
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd      1034 Mar 12 05:47 memory_monitor_summary.json
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd    335400 Mar 12 05:47 log.48838586._004343.job.log.tgz.1
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd      6363 Mar 12 05:47 heartbeat.json
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 12 05:48 boinc_mmap_file
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 12 05:48 wrapper_checkpoint.txt
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd       822 Mar 12 05:48 pilotlog.txt
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd        95 Mar 12 05:48 pilot_heartbeat.json
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd   1279949 Mar 12 05:48 log.48838586._004343.job.log.1
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd       357 Mar 12 05:48 output.list
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 12 05:48 runtime_log
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd   1628160 Mar 12 05:48 result.tar.gz
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar 12 05:48 runtime_log.err
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd       657 Mar 12 05:48 5QhNDmagqH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmowILDmDaNIln.diag
[2026-03-12 05:48:04] -rw-rw-r-- 1 whitlerd whitlerd     21139 Mar 12 05:48 stderr.txt
[2026-03-12 05:48:04] HITS file was successfully produced:
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd 212615399 Mar 12 05:46 shared/HITS.pool.root.1
[2026-03-12 05:48:04]  *** Contents of shared directory: ***
[2026-03-12 05:48:04] total 478936
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 12 03:21 start_atlas.sh
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd    597953 Mar 12 03:21 input.tar.gz
[2026-03-12 05:48:04] -rw-r--r-- 2 whitlerd whitlerd 275556004 Mar 12 03:21 ATLAS.root_0
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd 212615399 Mar 12 05:46 HITS.pool.root.1
[2026-03-12 05:48:04] -rw------- 1 whitlerd whitlerd   1628160 Mar 12 05:48 result.tar.gz
05:48:05 (1293792): run_atlas exited; CPU time 33890.526946
05:48:05 (1293792): called boinc_finish(0)

</stderr_txt>
]]>

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