Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:15:51 (6277): wrapper (7.7.26015): starting
23:15:51 (6277): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 23:15:51] Arguments: --nthreads 8
[2026-03-12 23:15:51] Threads: 8
[2026-03-12 23:15:51] Checking for CVMFS
[2026-03-12 23:15:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 23:15:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 23:15:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 23:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 23:15:56] 2.11.2.0 31129 117590 134212 157215 1 78 22489078 25165824 188 130560 148 26798742 99.770 22405996 818 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 23:15:56] CVMFS is ok
[2026-03-12 23:15:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 23:15:57] Checking for apptainer binary...
[2026-03-12 23:15:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 23:15:57] Running /usr/bin/apptainer --version
[2026-03-12 23:15:57] apptainer version 1.3.2-1.el7
[2026-03-12 23:15:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 23:16:15] cg-vwn364.simple-grid.lan
[2026-03-12 23:16:15] apptainer works
[2026-03-12 23:16:15] Set ATHENA_PROC_NUMBER=8
[2026-03-12 23:16:15] Set ATHENA_CORE_NUMBER=8
[2026-03-12 23:16:15] Starting ATLAS job with PandaID=7051347776
[2026-03-12 23:16:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 05:38:11]  *** The last 200 lines of the pilot log: ***
[2026-03-13 05:38:11] 2026-03-13 04:37:12,036 | INFO     | job 7051347776 has finished - writing final server update
[2026-03-13 05:38:11] 2026-03-13 04:37:12,036 | INFO     | total number of processed events: 400 (read)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,038 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7051347776/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,039 | INFO     | extracted standard info from prmon json
[2026-03-13 05:38:11] 2026-03-13 04:37:12,039 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 05:38:11] 2026-03-13 04:37:12,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 05:38:11] 2026-03-13 04:37:12,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 05:38:11] 2026-03-13 04:37:12,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 05:38:11] 2026-03-13 04:37:12,052 | INFO     | fitting pss+swap vs Time
[2026-03-13 05:38:11] 2026-03-13 04:37:12,053 | INFO     | sum of square deviations: 14954754815.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,068 | INFO     | sum of deviations: 185370144782.50003
[2026-03-13 05:38:11] 2026-03-13 04:37:12,069 | INFO     | mean x: 1773365496.5
[2026-03-13 05:38:11] 2026-03-13 04:37:12,069 | INFO     | mean y: 2489729.535714286
[2026-03-13 05:38:11] 2026-03-13 04:37:12,069 | INFO     | intersect: -21979082212.303913
[2026-03-13 05:38:11] 2026-03-13 04:37:12,070 | INFO     | chi2: 8.540207621291264
[2026-03-13 05:38:11] 2026-03-13 04:37:12,070 | INFO     | sum of square deviations: 14346910860.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,075 | INFO     | sum of deviations: 207007148165.9999
[2026-03-13 05:38:11] 2026-03-13 04:37:12,075 | INFO     | mean x: 1773365344.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,076 | INFO     | mean y: 2495089.2033426184
[2026-03-13 05:38:11] 2026-03-13 04:37:12,076 | INFO     | intersect: -25584846053.436016
[2026-03-13 05:38:11] 2026-03-13 04:37:12,077 | INFO     | chi2: 7.820938350794844
[2026-03-13 05:38:11] 2026-03-13 04:37:12,077 | INFO     | current chi2=7.820938350794844 (change=8.422152041166282 %)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,077 | INFO     | right removable region: 358
[2026-03-13 05:38:11] 2026-03-13 04:37:12,078 | INFO     | sum of square deviations: 14346910860.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,082 | INFO     | sum of deviations: 54618234839.00001
[2026-03-13 05:38:11] 2026-03-13 04:37:12,083 | INFO     | mean x: 1773365649.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,083 | INFO     | mean y: 2522520.554317549
[2026-03-13 05:38:11] 2026-03-13 04:37:12,083 | INFO     | intersect: -6748624288.515469
[2026-03-13 05:38:11] 2026-03-13 04:37:12,083 | INFO     | chi2: 3.5968397841937962
[2026-03-13 05:38:11] 2026-03-13 04:37:12,084 | INFO     | current chi2=3.5968397841937962 (change=57.88346204573934 %)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,084 | INFO     | sum of square deviations: 13755764892.5
[2026-03-13 05:38:11] 2026-03-13 04:37:12,088 | INFO     | sum of deviations: -41019832897.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,089 | INFO     | mean x: 1773365801.5
[2026-03-13 05:38:11] 2026-03-13 04:37:12,089 | INFO     | mean y: 2547161.8361581923
[2026-03-13 05:38:11] 2026-03-13 04:37:12,089 | INFO     | intersect: 5290742286.663127
[2026-03-13 05:38:11] 2026-03-13 04:37:12,090 | INFO     | chi2: 1.0454735679997498
[2026-03-13 05:38:11] 2026-03-13 04:37:12,090 | INFO     | current chi2=1.0454735679997498 (change=70.9335519309464 %)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,090 | INFO     | sum of square deviations: 13181084350.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,095 | INFO     | sum of deviations: -55765835952.00001
[2026-03-13 05:38:11] 2026-03-13 04:37:12,095 | INFO     | mean x: 1773365954.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,095 | INFO     | mean y: 2551056.458452722
[2026-03-13 05:38:11] 2026-03-13 04:37:12,096 | INFO     | intersect: 7505214133.918085
[2026-03-13 05:38:11] 2026-03-13 04:37:12,096 | INFO     | chi2: 0.9516572673971697
[2026-03-13 05:38:11] 2026-03-13 04:37:12,096 | INFO     | current chi2=0.9516572673971697 (change=8.97356982272387 %)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,097 | INFO     | left removable region: 30
[2026-03-13 05:38:11] 2026-03-13 04:37:12,097 | INFO     | sum of square deviations: 10941980042.0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,101 | INFO     | sum of deviations: -3736469935.5
[2026-03-13 05:38:11] 2026-03-13 04:37:12,102 | INFO     | mean x: 1773366228.5
[2026-03-13 05:38:11] 2026-03-13 04:37:12,102 | INFO     | mean y: 2549320.375
[2026-03-13 05:38:11] 2026-03-13 04:37:12,102 | INFO     | intersect: 608118839.9671901
[2026-03-13 05:38:11] 2026-03-13 04:37:12,102 | INFO     | chi2: 0.08774344058743447
[2026-03-13 05:38:11] 2026-03-13 04:37:12,103 | INFO     | current memory leak: -0.34 B/s (using 328 data points, chi2=0.09)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,103 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | ..............................
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . Timing measurements:
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . get job = 0 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . initial setup = 110 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . payload setup = 146 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . stage-in = 0 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . payload execution = 22320 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . stage-out = 4 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,104 | INFO     | . log creation = 2 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,105 | INFO     | ..............................
[2026-03-13 05:38:11] 2026-03-13 04:37:12,493 | INFO     | time since job start (22491s) is within the limit (345600.0s)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,671 | INFO     | 
[2026-03-13 05:38:11] 2026-03-13 04:37:12,671 | INFO     | job summary report
[2026-03-13 05:38:11] 2026-03-13 04:37:12,671 | INFO     | --------------------------------------------------
[2026-03-13 05:38:11] 2026-03-13 04:37:12,671 | INFO     | PanDA job id: 7051347776
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | task id: 48997968
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | errors: (none)
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | pilot state: finished 
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | transexitcode: 0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | exeerrorcode: 0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | exeerrordiag: 
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | exitcode: 0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,672 | INFO     | exitmsg: OK
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | cpuconsumptiontime: 85564 s
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | nevents: 400
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | neventsw: 0
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | pid: 14705
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | pgrp: 14705
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | corecount: 8
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | event service: False
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | sizes: {0: 2279149, 1: 2240460, 2: 2280268, 13: 2280296, 22470: 2314823, 22471: 2314822, 22477: 2324090, 22478: 2324228}
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | --------------------------------------------------
[2026-03-13 05:38:11] 2026-03-13 04:37:12,673 | INFO     | 
[2026-03-13 05:38:11] 2026-03-13 04:37:12,674 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-13 05:38:11] 2026-03-13 04:37:13,145 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,148 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 05:38:11] 2026-03-13 04:37:13,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,148 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 05:38:11] 2026-03-13 04:37:13,148 | INFO     | job 7051347776 has completed (purged errors)
[2026-03-13 05:38:11] 2026-03-13 04:37:13,148 | INFO     | overall cleanup function is called
[2026-03-13 05:38:11] 2026-03-13 04:37:14,156 | INFO     | --- collectZombieJob: --- 10, [14705]
[2026-03-13 05:38:11] 2026-03-13 04:37:14,156 | INFO     | zombie collector waiting for pid 14705
[2026-03-13 05:38:11] 2026-03-13 04:37:14,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 05:38:11] 2026-03-13 04:37:14,157 | INFO     | collected zombie processes
[2026-03-13 05:38:11] 2026-03-13 04:37:14,157 | INFO     | will attempt to kill all subprocesses of pid=14705
[2026-03-13 05:38:11] 2026-03-13 04:37:14,242 | INFO     | process IDs to be killed: [14705] (in reverse order)
[2026-03-13 05:38:11] 2026-03-13 04:37:15,226 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 05:38:11] 2026-03-13 04:37:15,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 05:38:11] 2026-03-13 04:37:15,229 | INFO     | did not find any defunct processes belonging to 14705
[2026-03-13 05:38:11] 2026-03-13 04:37:15,231 | INFO     | did not find any defunct processes belonging to 14705
[2026-03-13 05:38:11] 2026-03-13 04:37:15,231 | INFO     | ready for new job
[2026-03-13 05:38:11] 2026-03-13 04:37:15,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 05:38:11] 2026-03-13 04:37:15,233 | INFO     | **************************************
[2026-03-13 05:38:11] 2026-03-13 04:37:15,234 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 05:38:11] 2026-03-13 04:37:15,234 | INFO     | **************************************
[2026-03-13 05:38:11] 2026-03-13 04:37:15,234 | INFO     | 
[2026-03-13 05:38:11] 2026-03-13 04:37:15,235 | INFO     | pilot is running in a VM
[2026-03-13 05:38:11] 2026-03-13 04:37:15,235 | INFO     | architecture information:
[2026-03-13 05:38:11] 2026-03-13 04:37:15,246 | INFO     | executing command: cat /etc/os-release
[2026-03-13 05:38:11] 2026-03-13 04:37:15,642 | INFO     | cat /etc/os-release:
[2026-03-13 05:38:11] NAME="CentOS Linux"
[2026-03-13 05:38:11] VERSION="7 (Core)"
[2026-03-13 05:38:11] ID="centos"
[2026-03-13 05:38:11] ID_LIKE="rhel fedora"
[2026-03-13 05:38:11] VERSION_ID="7"
[2026-03-13 05:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 05:38:11] ANSI_COLOR="0;31"
[2026-03-13 05:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 05:38:11] HOME_URL="https://www.centos.org/"
[2026-03-13 05:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 05:38:11] 
[2026-03-13 05:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 05:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 05:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 05:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 05:38:11] 
[2026-03-13 05:38:11] 2026-03-13 04:37:15,642 | INFO     | **************************************
[2026-03-13 05:38:11] 2026-03-13 04:37:16,145 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-13 05:38:11] 2026-03-13 04:37:16,428 | INFO     | sufficient remaining disk space (495765684224 B)
[2026-03-13 05:38:11] 2026-03-13 04:37:16,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 05:38:11] 2026-03-13 04:37:16,428 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 05:38:11] 2026-03-13 04:37:16,428 | INFO     | update_server=False
[2026-03-13 05:38:11] 2026-03-13 04:37:16,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 05:38:11] 2026-03-13 04:37:16,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:38:11] 2026-03-13 04:37:16,633 | INFO     | aborting loop
[2026-03-13 05:38:11] 2026-03-13 04:37:16,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 05:38:11] 2026-03-13 04:37:16,828 | INFO     | all job control threads have been joined
[2026-03-13 05:38:11] 2026-03-13 04:37:17,066 | INFO     | all data control threads have been joined
[2026-03-13 05:38:11] 2026-03-13 04:37:17,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 05:38:11] 2026-03-13 04:37:17,434 | INFO     | [job] retrieve thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,593 | INFO     | [data] copytool_in thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,639 | INFO     | [job] job monitor thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,641 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,690 | INFO     | [payload] validate_post thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,692 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:17,766 | INFO     | all payload control threads have been joined
[2026-03-13 05:38:11] 2026-03-13 04:37:17,834 | INFO     | [job] control thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,024 | INFO     | [payload] failed_post thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 05:38:11] 2026-03-13 04:37:18,072 | INFO     | [data] control thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,254 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,302 | INFO     | [job] queue monitor thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,590 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,644 | INFO     | [job] validate thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,772 | INFO     | [payload] control thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:18,794 | INFO     | [data] copytool_out thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:22,050 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 05:38:11] 2026-03-13 04:37:45,662 | INFO     | PID=10248 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 05:38:11] 2026-03-13 04:37:45,662 | INFO     | .. there are 2 such processes running
[2026-03-13 05:38:11] 2026-03-13 04:37:45,663 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 05:38:11] 2026-03-13 04:37:45,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 05:38:11] 2026-03-13 04:37:45,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 05:38:11] 2026-03-13 04:37:59,230 | INFO     | [monitor] cgroup control has ended
[2026-03-13 05:38:11] 2026-03-13 04:38:01,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559082510144)>', '<ExcThread(monitor, started 140558366402304)>']
[2026-03-13 05:38:11] 2026-03-13 04:38:01,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 05:38:11] 2026-03-13 04:38:01,759 | INFO     | [monitor] control thread has ended
[2026-03-13 05:38:11] 2026-03-13 04:38:06,239 | INFO     | all workflow threads have been joined
[2026-03-13 05:38:11] 2026-03-13 04:38:06,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 05:38:11] 2026-03-13 04:38:06,239 | INFO     | traces error code: 0
[2026-03-13 05:38:11] 2026-03-13 04:38:06,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 05:38:11] 2026-03-13 04:38:06,478 [wrapper] ==== pilot stdout END ====
[2026-03-13 05:38:11] 2026-03-13 04:38:06,602 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 05:38:11] 2026-03-13 04:38:06,726 [wrapper] pilotpid: 10248
[2026-03-13 05:38:11] 2026-03-13 04:38:06,866 [wrapper] Pilot exit status: 0
[2026-03-13 05:38:11] 2026-03-13 04:38:07,457 [wrapper] pandaids: 7051347776
[2026-03-13 05:38:11] 2026-03-13 04:38:08,531 [wrapper] cleanup supervisor_pilot 21701 10249
[2026-03-13 05:38:11] 2026-03-13 04:38:08,640 [wrapper] Test setup, not cleaning
[2026-03-13 05:38:11] 2026-03-13 04:38:08,743 [wrapper] apfmon messages muted
[2026-03-13 05:38:11] 2026-03-13 04:38:08,857 [wrapper] ==== wrapper stdout END ====
[2026-03-13 05:38:11] 2026-03-13 04:38:08,943 [wrapper] ==== wrapper stderr END ====
[2026-03-13 05:38:11]  *** Error codes and diagnostics ***
[2026-03-13 05:38:11]     "exeErrorCode": 0,
[2026-03-13 05:38:11]     "exeErrorDiag": "",
[2026-03-13 05:38:11]     "pilotErrorCode": 0,
[2026-03-13 05:38:11]     "pilotErrorDiag": "",
[2026-03-13 05:38:11]  *** Listing of results directory ***
[2026-03-13 05:38:11] total 648252
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc    585013 Mar 12 06:40 pilot3.tar.gz
[2026-03-13 05:38:11] -rwx------. 1 boinc boinc     36322 Mar 12 06:43 runpilot2-wrapper.sh
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc      5111 Mar 12 06:45 queuedata.json
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc       100 Mar 12 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 05:38:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 23:15 run_atlas
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc       105 Mar 12 23:15 job.xml
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc      6392 Mar 12 23:15 init_data.xml
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc 367292147 Mar 12 23:15 EVNT.48997965._000109.pool.root.1
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc     15845 Mar 12 23:15 start_atlas.sh
[2026-03-13 05:38:11] drwxrwx--x. 2 boinc boinc        68 Mar 12 23:15 shared
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc    597533 Mar 12 23:15 input.tar.gz
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc         0 Mar 12 23:15 boinc_lockfile
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc      2566 Mar 12 23:16 pandaJob.out
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc       415 Mar 12 23:22 workernode_map.json
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc   1006498 Mar 12 23:22 agis_schedconf.cvmfs.json
[2026-03-13 05:38:11] drwx------. 5 boinc boinc      4096 Mar 12 23:22 pilot3
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc 285152021 Mar 13 05:35 HITS.48997968._002798.pool.root.1
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc       531 Mar 13 05:35 boinc_task_state.xml
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc      1023 Mar 13 05:37 memory_monitor_summary.json
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc   1511578 Mar 13 05:37 agis_ddmendpoints.agis.ALL.json
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc    582789 Mar 13 05:37 log.48997968._002798.job.log.tgz.1
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc        95 Mar 13 05:37 pilot_heartbeat.json
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc      6316 Mar 13 05:37 heartbeat.json
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc      4881 Mar 13 05:38 pilotlog.txt
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc      8192 Mar 13 05:38 boinc_mmap_file
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc   3140434 Mar 13 05:38 log.48997968._002798.job.log.1
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc        28 Mar 13 05:38 wrapper_checkpoint.txt
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc       357 Mar 13 05:38 output.list
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc       620 Mar 13 05:38 runtime_log
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc   3737600 Mar 13 05:38 result.tar.gz
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc       656 Mar 13 05:38 yYJODmU0nK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwFmLDmw2Fb3n.diag
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc      8832 Mar 13 05:38 runtime_log.err
[2026-03-13 05:38:11] -rw-r--r--. 1 boinc boinc     20729 Mar 13 05:38 stderr.txt
[2026-03-13 05:38:11] HITS file was successfully produced:
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc 285152021 Mar 13 05:35 shared/HITS.pool.root.1
[2026-03-13 05:38:11]  *** Contents of shared directory: ***
[2026-03-13 05:38:11] total 641408
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc 367292147 Mar 12 23:15 ATLAS.root_0
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc     15845 Mar 12 23:15 start_atlas.sh
[2026-03-13 05:38:11] -rw-r--r--. 2 boinc boinc    597533 Mar 12 23:15 input.tar.gz
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc 285152021 Mar 13 05:35 HITS.pool.root.1
[2026-03-13 05:38:11] -rw-------. 1 boinc boinc   3737600 Mar 13 05:38 result.tar.gz
05:38:13 (6277): run_atlas exited; CPU time 85812.423249
05:38:13 (6277): called boinc_finish(0)

</stderr_txt>
]]>

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