Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:59:25 (3210988): wrapper (7.7.26015): starting
17:59:25 (3210988): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 17:59:25] Arguments: --nthreads 3
[2026-03-12 17:59:25] Threads: 3
[2026-03-12 17:59:25] Checking for CVMFS
[2026-03-12 17:59:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 17:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 17:59:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 17:59:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 17:59:26] 2.9.2.0 38641 21594 89992 157208 3 50 31036334 36864000 0 130560 0 8877608 99.983 822736 12676 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 17:59:26] CVMFS is ok
[2026-03-12 17:59:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 17:59:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 17:59:26] Further information can be found at the LHC@home message board.
[2026-03-12 17:59:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 17:59:26] Checking for apptainer binary...
[2026-03-12 17:59:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 17:59:26] Running /usr/bin/apptainer --version
[2026-03-12 17:59:26] apptainer version 1.4.1-1.1
[2026-03-12 17:59:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 17:59:26] magicA161
[2026-03-12 17:59:26] apptainer works
[2026-03-12 17:59:26] Set ATHENA_PROC_NUMBER=3
[2026-03-12 17:59:26] Set ATHENA_CORE_NUMBER=3
[2026-03-12 17:59:26] Starting ATLAS job with PandaID=7036984011
[2026-03-12 17:59:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 19:36:06]  *** The last 200 lines of the pilot log: ***
[2026-03-12 19:36:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 19:36:06] ANSI_COLOR="0;31"
[2026-03-12 19:36:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 19:36:06] HOME_URL="https://www.centos.org/"
[2026-03-12 19:36:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 19:36:06] 
[2026-03-12 19:36:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 19:36:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 19:36:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 19:36:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 19:36:06] 
[2026-03-12 19:36:06] 2026-03-12 18:35:35,595 | INFO     | **************************************
[2026-03-12 19:36:06] 2026-03-12 18:35:36,099 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 19:36:06] 2026-03-12 18:35:36,111 | INFO     | sufficient remaining disk space (372594704384 B)
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | INFO     | update_server=False
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | INFO     | will abort loop
[2026-03-12 19:36:06] 2026-03-12 18:35:36,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:36:06] 2026-03-12 18:35:36,835 | INFO     | all data control threads have been joined
[2026-03-12 19:36:06] 2026-03-12 18:35:36,854 | INFO     | all job control threads have been joined
[2026-03-12 19:36:06] 2026-03-12 18:35:36,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 19:36:06] 2026-03-12 18:35:37,117 | INFO     | [job] retrieve thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,118 | INFO     | [job] job monitor thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,118 | INFO     | [job] queue monitor thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,134 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,199 | INFO     | all payload control threads have been joined
[2026-03-12 19:36:06] 2026-03-12 18:35:37,253 | INFO     | [data] copytool_in thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,538 | INFO     | [payload] validate_post thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,841 | INFO     | [data] control thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:37,859 | INFO     | [job] control thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,205 | INFO     | [payload] control thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,518 | INFO     | [job] validate thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,518 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,524 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,600 | INFO     | [payload] failed_post thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:38,977 | INFO     | [data] copytool_out thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:39,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 19:36:06] 2026-03-12 18:35:42,174 | INFO     | [monitor] cgroup control has ended
[2026-03-12 19:36:06] 2026-03-12 18:35:43,189 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:47,103 | INFO     | job.realtimelogging is not enabled
[2026-03-12 19:36:06] 2026-03-12 18:35:48,108 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 19:36:06] 2026-03-12 18:35:49,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433606674240)>', '<ExcThread(monitor, started 140432671500032)>']
[2026-03-12 19:36:06] 2026-03-12 18:35:54,678 | INFO     | all workflow threads have been joined
[2026-03-12 19:36:06] 2026-03-12 18:35:54,678 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 19:36:06] 2026-03-12 18:35:54,678 | INFO     | traces error code: 0
[2026-03-12 19:36:06] 2026-03-12 18:35:54,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | INFO     | PID=3215035 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | CRITICAL | thread 'MainThread' is not alive
[2026-03-12 19:36:06] 2026-03-12 18:36:05,967 | INFO     | [monitor] control thread has ended
[2026-03-12 19:36:06] 2026-03-12 18:36:06,013 [wrapper] ==== pilot stdout END ====
[2026-03-12 19:36:06] 2026-03-12 18:36:06,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 19:36:06] 2026-03-12 18:36:06,018 [wrapper] pilotpid: 3215035
[2026-03-12 19:36:06] 2026-03-12 18:36:06,021 [wrapper] Pilot exit status: 0
[2026-03-12 19:36:06] 2026-03-12 18:36:06,028 [wrapper] pandaids: 7036984011
[2026-03-12 19:36:06] 2026-03-12 18:36:06,045 [wrapper] cleanup supervisor_pilot 3225792 3215036
[2026-03-12 19:36:06] 2026-03-12 18:36:06,047 [wrapper] Test setup, not cleaning
[2026-03-12 19:36:06] 2026-03-12 18:36:06,050 [wrapper] apfmon messages muted
[2026-03-12 19:36:06] 2026-03-12 18:36:06,052 [wrapper] ==== wrapper stdout END ====
[2026-03-12 19:36:06] 2026-03-12 18:36:06,055 [wrapper] ==== wrapper stderr END ====
[2026-03-12 19:36:06]  *** Error codes and diagnostics ***
[2026-03-12 19:36:06]     "exeErrorCode": 0,
[2026-03-12 19:36:06]     "exeErrorDiag": "",
[2026-03-12 19:36:06]     "pilotErrorCode": 0,
[2026-03-12 19:36:06]     "pilotErrorDiag": "",
[2026-03-12 19:36:06]  *** Listing of results directory ***
[2026-03-12 19:36:06] total 511488
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:08 pilot3.tar.gz
[2026-03-12 19:36:06] -rwx------ 1 boinc boinc     36322 Mar  4 02:25 runpilot2-wrapper.sh
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:25 queuedata.json
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc       100 Mar 12 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 19:36:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 17:59 run_atlas
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc       105 Mar 12 17:59 job.xml
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc 291293854 Mar 12 17:59 EVNT.48220197._000340.pool.root.1
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc    597963 Mar 12 17:59 input.tar.gz
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc     15845 Mar 12 17:59 start_atlas.sh
[2026-03-12 19:36:06] drwxrwx--x 2 boinc boinc      4096 Mar 12 17:59 shared
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc         0 Mar 12 17:59 boinc_setup_complete
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      6448 Mar 12 17:59 init_data.xml
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc         0 Mar 12 17:59 boinc_lockfile
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      2567 Mar 12 17:59 pandaJob.out
[2026-03-12 19:36:06] -rw------- 1 boinc boinc   1006536 Mar 12 17:59 agis_schedconf.cvmfs.json
[2026-03-12 19:36:06] -rw------- 1 boinc boinc   1511578 Mar 12 17:59 agis_ddmendpoints.agis.ALL.json
[2026-03-12 19:36:06] -rw------- 1 boinc boinc       426 Mar 12 17:59 workernode_map.json
[2026-03-12 19:36:06] drwx------ 5 boinc boinc      4096 Mar 12 17:59 pilot3
[2026-03-12 19:36:06] -rw------- 1 boinc boinc 226335921 Mar 12 19:35 HITS.48838577._008576.pool.root.1
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc       529 Mar 12 19:35 boinc_task_state.xml
[2026-03-12 19:36:06] -rw------- 1 boinc boinc      1017 Mar 12 19:35 memory_monitor_summary.json
[2026-03-12 19:36:06] -rw------- 1 boinc boinc    273938 Mar 12 19:35 log.48838577._008576.job.log.tgz.1
[2026-03-12 19:36:06] -rw------- 1 boinc boinc      6303 Mar 12 19:35 heartbeat.json
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      8192 Mar 12 19:35 boinc_mmap_file
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc        27 Mar 12 19:35 wrapper_checkpoint.txt
[2026-03-12 19:36:06] -rw------- 1 boinc boinc       817 Mar 12 19:36 pilotlog.txt
[2026-03-12 19:36:06] -rw------- 1 boinc boinc        95 Mar 12 19:36 pilot_heartbeat.json
[2026-03-12 19:36:06] -rw------- 1 boinc boinc    837645 Mar 12 19:36 log.48838577._008576.job.log.1
[2026-03-12 19:36:06] -rw------- 1 boinc boinc       357 Mar 12 19:36 output.list
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc       620 Mar 12 19:36 runtime_log
[2026-03-12 19:36:06] -rw------- 1 boinc boinc   1126400 Mar 12 19:36 result.tar.gz
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      8911 Mar 12 19:36 runtime_log.err
[2026-03-12 19:36:06] -rw------- 1 boinc boinc       660 Mar 12 19:36 rDEODmXAqH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJvGLDmFeW8Zn.diag
[2026-03-12 19:36:06] -rw-r--r-- 1 boinc boinc      8699 Mar 12 19:36 stderr.txt
[2026-03-12 19:36:06] HITS file was successfully produced:
[2026-03-12 19:36:06] -rw------- 1 boinc boinc 226335921 Mar 12 19:35 shared/HITS.pool.root.1
[2026-03-12 19:36:06]  *** Contents of shared directory: ***
[2026-03-12 19:36:06] total 507204
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc 291293854 Mar 12 17:59 ATLAS.root_0
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc    597963 Mar 12 17:59 input.tar.gz
[2026-03-12 19:36:06] -rw-r--r-- 2 boinc boinc     15845 Mar 12 17:59 start_atlas.sh
[2026-03-12 19:36:06] -rw------- 1 boinc boinc 226335921 Mar 12 19:35 HITS.pool.root.1
[2026-03-12 19:36:06] -rw------- 1 boinc boinc   1126400 Mar 12 19:36 result.tar.gz
19:36:07 (3210988): run_atlas exited; CPU time 16516.965781
19:36:07 (3210988): called boinc_finish(0)

</stderr_txt>
]]>

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