Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:07 (3242088): wrapper (7.7.26015): starting
09:44:07 (3242088): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 09:44:07] Arguments: --nthreads 3
[2026-03-13 09:44:07] Threads: 3
[2026-03-13 09:44:07] Checking for CVMFS
[2026-03-13 09:44:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 09:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 09:44:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 09:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 09:44:08] 2.9.2.0 36660 22724 92796 157233 3 50 25654654 36864000 0 130560 0 9082632 99.983 852514 12052 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 09:44:08] CVMFS is ok
[2026-03-13 09:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 09:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 09:44:08] Further information can be found at the LHC@home message board.
[2026-03-13 09:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 09:44:08] Checking for apptainer binary...
[2026-03-13 09:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 09:44:08] Running /usr/bin/apptainer --version
[2026-03-13 09:44:08] apptainer version 1.4.1-1.1
[2026-03-13 09:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 09:44:08] thA371a
[2026-03-13 09:44:08] apptainer works
[2026-03-13 09:44:08] Set ATHENA_PROC_NUMBER=3
[2026-03-13 09:44:08] Set ATHENA_CORE_NUMBER=3
[2026-03-13 09:44:08] Starting ATLAS job with PandaID=7037041529
[2026-03-13 09:44:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 11:22:44]  *** The last 200 lines of the pilot log: ***
[2026-03-13 11:22:44] 2026-03-13 10:22:13,191 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 11:22:44] 2026-03-13 10:22:13,191 | INFO     | **************************************
[2026-03-13 11:22:44] 2026-03-13 10:22:13,191 | INFO     | 
[2026-03-13 11:22:44] 2026-03-13 10:22:13,191 | INFO     | architecture information:
[2026-03-13 11:22:44] 2026-03-13 10:22:13,191 | INFO     | executing command: cat /etc/os-release
[2026-03-13 11:22:44] 2026-03-13 10:22:13,200 | INFO     | cat /etc/os-release:
[2026-03-13 11:22:44] NAME="CentOS Linux"
[2026-03-13 11:22:44] VERSION="7 (Core)"
[2026-03-13 11:22:44] ID="centos"
[2026-03-13 11:22:44] ID_LIKE="rhel fedora"
[2026-03-13 11:22:44] VERSION_ID="7"
[2026-03-13 11:22:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 11:22:44] ANSI_COLOR="0;31"
[2026-03-13 11:22:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 11:22:44] HOME_URL="https://www.centos.org/"
[2026-03-13 11:22:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 11:22:44] 
[2026-03-13 11:22:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 11:22:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 11:22:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 11:22:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 11:22:44] 
[2026-03-13 11:22:44] 2026-03-13 10:22:13,201 | INFO     | **************************************
[2026-03-13 11:22:44] 2026-03-13 10:22:13,704 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 11:22:44] 2026-03-13 10:22:13,717 | INFO     | sufficient remaining disk space (230543065088 B)
[2026-03-13 11:22:44] 2026-03-13 10:22:13,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 11:22:44] 2026-03-13 10:22:13,718 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 11:22:44] 2026-03-13 10:22:13,718 | INFO     | update_server=False
[2026-03-13 11:22:44] 2026-03-13 10:22:13,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 11:22:44] 2026-03-13 10:22:13,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 11:22:44] 2026-03-13 10:22:13,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:22:44] 2026-03-13 10:22:14,037 | INFO     | job.realtimelogging is not enabled
[2026-03-13 11:22:44] 2026-03-13 10:22:14,072 | INFO     | all data control threads have been joined
[2026-03-13 11:22:44] 2026-03-13 10:22:14,170 | INFO     | all job control threads have been joined
[2026-03-13 11:22:44] 2026-03-13 10:22:14,412 | INFO     | all payload control threads have been joined
[2026-03-13 11:22:44] 2026-03-13 10:22:14,723 | INFO     | [job] retrieve thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:14,724 | INFO     | [job] queue monitor thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:14,743 | INFO     | [data] copytool_in thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:14,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 11:22:44] 2026-03-13 10:22:14,802 | INFO     | [payload] validate_post thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,077 | INFO     | [data] control thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,175 | INFO     | [job] control thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,418 | INFO     | [payload] control thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,539 | WARNING  | process 3250551 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 11:22:44] 2026-03-13 10:22:15,567 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 11:22:44] 2026-03-13 10:22:15,602 | INFO     | number of running child processes to parent process 3250551: 1
[2026-03-13 11:22:44] 2026-03-13 10:22:15,602 | INFO     | maximum number of monitored processes: 6
[2026-03-13 11:22:44] 2026-03-13 10:22:15,602 | INFO     | aborting job monitoring since job object (job id=7037041529) has expired
[2026-03-13 11:22:44] 2026-03-13 10:22:15,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:22:44] 2026-03-13 10:22:15,602 | INFO     | will abort loop
[2026-03-13 11:22:44] 2026-03-13 10:22:15,709 | INFO     | [payload] failed_post thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:15,971 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:16,003 | INFO     | [job] validate thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:16,021 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:16,042 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:16,608 | INFO     | [job] job monitor thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:16,801 | INFO     | [data] copytool_out thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:17,725 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 11:22:44] 2026-03-13 10:22:25,349 | INFO     | [monitor] cgroup control has ended
[2026-03-13 11:22:44] 2026-03-13 10:22:26,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135868057408)>', '<ExcThread(monitor, started 140135236622080)>']
[2026-03-13 11:22:44] 2026-03-13 10:22:31,777 | INFO     | all workflow threads have been joined
[2026-03-13 11:22:44] 2026-03-13 10:22:31,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 11:22:44] 2026-03-13 10:22:31,777 | INFO     | traces error code: 0
[2026-03-13 11:22:44] 2026-03-13 10:22:31,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 11:22:44] 2026-03-13 10:22:44,364 | INFO     | PID=3246130 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 11:22:44] 2026-03-13 10:22:44,364 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 11:22:44] 2026-03-13 10:22:44,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 11:22:44] 2026-03-13 10:22:44,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 11:22:44] 2026-03-13 10:22:44,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 11:22:44] 2026-03-13 10:22:44,365 | INFO     | [monitor] control thread has ended
[2026-03-13 11:22:44] 2026-03-13 10:22:44,410 [wrapper] ==== pilot stdout END ====
[2026-03-13 11:22:44] 2026-03-13 10:22:44,413 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 11:22:44] 2026-03-13 10:22:44,415 [wrapper] pilotpid: 3246130
[2026-03-13 11:22:44] 2026-03-13 10:22:44,417 [wrapper] Pilot exit status: 0
[2026-03-13 11:22:44] 2026-03-13 10:22:44,424 [wrapper] pandaids: 7037041529
[2026-03-13 11:22:44] 2026-03-13 10:22:44,439 [wrapper] cleanup supervisor_pilot 3255742 3246131
[2026-03-13 11:22:44] 2026-03-13 10:22:44,441 [wrapper] Test setup, not cleaning
[2026-03-13 11:22:44] 2026-03-13 10:22:44,444 [wrapper] apfmon messages muted
[2026-03-13 11:22:44] 2026-03-13 10:22:44,446 [wrapper] ==== wrapper stdout END ====
[2026-03-13 11:22:44] 2026-03-13 10:22:44,448 [wrapper] ==== wrapper stderr END ====
[2026-03-13 11:22:44]  *** Error codes and diagnostics ***
[2026-03-13 11:22:44]     "exeErrorCode": 0,
[2026-03-13 11:22:44]     "exeErrorDiag": "",
[2026-03-13 11:22:44]     "pilotErrorCode": 0,
[2026-03-13 11:22:44]     "pilotErrorDiag": "",
[2026-03-13 11:22:44]  *** Listing of results directory ***
[2026-03-13 11:22:44] total 509516
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:08 pilot3.tar.gz
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:22 queuedata.json
[2026-03-13 11:22:44] -rwx------ 1 boinc boinc     36322 Mar  4 02:22 runpilot2-wrapper.sh
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc       100 Mar 13 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 11:22:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 09:44 run_atlas
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc       105 Mar 13 09:44 job.xml
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc 290249930 Mar 13 09:44 EVNT.48220197._000368.pool.root.1
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc    597961 Mar 13 09:44 input.tar.gz
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc     15845 Mar 13 09:44 start_atlas.sh
[2026-03-13 11:22:44] drwxrwx--x 2 boinc boinc      4096 Mar 13 09:44 shared
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc         0 Mar 13 09:44 boinc_setup_complete
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      6439 Mar 13 09:44 init_data.xml
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc         0 Mar 13 09:44 boinc_lockfile
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      2567 Mar 13 09:44 pandaJob.out
[2026-03-13 11:22:44] -rw------- 1 boinc boinc   1006487 Mar 13 09:44 agis_schedconf.cvmfs.json
[2026-03-13 11:22:44] -rw------- 1 boinc boinc   1511578 Mar 13 09:44 agis_ddmendpoints.agis.ALL.json
[2026-03-13 11:22:44] -rw------- 1 boinc boinc       428 Mar 13 09:44 workernode_map.json
[2026-03-13 11:22:44] drwx------ 5 boinc boinc      4096 Mar 13 09:44 pilot3
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc       529 Mar 13 11:21 boinc_task_state.xml
[2026-03-13 11:22:44] -rw------- 1 boinc boinc 225326883 Mar 13 11:21 HITS.48838577._009274.pool.root.1
[2026-03-13 11:22:44] -rw------- 1 boinc boinc      1020 Mar 13 11:22 memory_monitor_summary.json
[2026-03-13 11:22:44] -rw------- 1 boinc boinc    270529 Mar 13 11:22 log.48838577._009274.job.log.tgz.1
[2026-03-13 11:22:44] -rw------- 1 boinc boinc      6314 Mar 13 11:22 heartbeat.json
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      8192 Mar 13 11:22 boinc_mmap_file
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc        27 Mar 13 11:22 wrapper_checkpoint.txt
[2026-03-13 11:22:44] -rw------- 1 boinc boinc       747 Mar 13 11:22 pilotlog.txt
[2026-03-13 11:22:44] -rw------- 1 boinc boinc        95 Mar 13 11:22 pilot_heartbeat.json
[2026-03-13 11:22:44] -rw------- 1 boinc boinc    852482 Mar 13 11:22 log.48838577._009274.job.log.1
[2026-03-13 11:22:44] -rw------- 1 boinc boinc       357 Mar 13 11:22 output.list
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc       620 Mar 13 11:22 runtime_log
[2026-03-13 11:22:44] -rw------- 1 boinc boinc   1136640 Mar 13 11:22 result.tar.gz
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      8901 Mar 13 11:22 runtime_log.err
[2026-03-13 11:22:44] -rw------- 1 boinc boinc       658 Mar 13 11:22 nfQODmu7pH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlqILDmmTJdWo.diag
[2026-03-13 11:22:44] -rw-r--r-- 1 boinc boinc      9954 Mar 13 11:22 stderr.txt
[2026-03-13 11:22:44] HITS file was successfully produced:
[2026-03-13 11:22:44] -rw------- 1 boinc boinc 225326883 Mar 13 11:21 shared/HITS.pool.root.1
[2026-03-13 11:22:44]  *** Contents of shared directory: ***
[2026-03-13 11:22:44] total 505216
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc 290249930 Mar 13 09:44 ATLAS.root_0
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc    597961 Mar 13 09:44 input.tar.gz
[2026-03-13 11:22:44] -rw-r--r-- 2 boinc boinc     15845 Mar 13 09:44 start_atlas.sh
[2026-03-13 11:22:44] -rw------- 1 boinc boinc 225326883 Mar 13 11:21 HITS.pool.root.1
[2026-03-13 11:22:44] -rw------- 1 boinc boinc   1136640 Mar 13 11:22 result.tar.gz
11:22:45 (3242088): run_atlas exited; CPU time 16887.973476
11:22:45 (3242088): called boinc_finish(0)

</stderr_txt>
]]>

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