Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:25:35 (4739): wrapper (7.7.26015): starting
05:25:35 (4739): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 05:25:35] Arguments: --nthreads 4
[2026-03-12 05:25:35] Threads: 4
[2026-03-12 05:25:35] Checking for CVMFS
[2026-03-12 05:27:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 05:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 05:30:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 05:30:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 05:30:24] 2.11.5.0 4966 4 25156 157185 1 1 2999626 4194304 0 130560 0 0 0.000 1336 11 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-12 05:30:24] CVMFS is ok
[2026-03-12 05:30:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 05:30:24] Checking for apptainer binary...
[2026-03-12 05:30:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 05:30:24] Running /usr/bin/apptainer --version
[2026-03-12 05:30:25] apptainer version 1.0.3
[2026-03-12 05:30:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 05:30:26] TeeC35
[2026-03-12 05:30:26] apptainer works
[2026-03-12 05:30:26] Set ATHENA_PROC_NUMBER=4
[2026-03-12 05:30:26] Set ATHENA_CORE_NUMBER=4
[2026-03-12 05:30:26] Starting ATLAS job with PandaID=7037040485
[2026-03-12 05:30:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:48:22]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:48:22] 2026-03-12 08:48:09,165 | INFO     | this job has now completed (state=finished)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,165 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:48:22] 2026-03-12 08:48:09,165 | INFO     | job 7037040485 has finished - writing final server update
[2026-03-12 08:48:22] 2026-03-12 08:48:09,166 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,188 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7037040485/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,189 | INFO     | extracted standard info from prmon json
[2026-03-12 08:48:22] 2026-03-12 08:48:09,189 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:48:22] 2026-03-12 08:48:09,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:48:22] 2026-03-12 08:48:09,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:48:22] 2026-03-12 08:48:09,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:48:22] 2026-03-12 08:48:09,202 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:48:22] 2026-03-12 08:48:09,203 | INFO     | sum of square deviations: 2060343747.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,207 | INFO     | sum of deviations: -56650830417.99999
[2026-03-12 08:48:22] 2026-03-12 08:48:09,208 | INFO     | mean x: 1773299299.5
[2026-03-12 08:48:22] 2026-03-12 08:48:09,208 | INFO     | mean y: 2435034.861702128
[2026-03-12 08:48:22] 2026-03-12 08:48:09,208 | INFO     | intersect: 48760744439.59458
[2026-03-12 08:48:22] 2026-03-12 08:48:09,209 | INFO     | chi2: 2.5678413059465037
[2026-03-12 08:48:22] 2026-03-12 08:48:09,211 | INFO     | sum of square deviations: 1900284932.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,214 | INFO     | sum of deviations: -43683992891.00001
[2026-03-12 08:48:22] 2026-03-12 08:48:09,215 | INFO     | mean x: 1773299147.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,215 | INFO     | mean y: 2447165.7650273223
[2026-03-12 08:48:22] 2026-03-12 08:48:09,215 | INFO     | intersect: 40767274601.214264
[2026-03-12 08:48:22] 2026-03-12 08:48:09,216 | INFO     | chi2: 1.9153583103264729
[2026-03-12 08:48:22] 2026-03-12 08:48:09,216 | INFO     | current chi2=1.9153583103264729 (change=25.409786582567897 %)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,217 | INFO     | sum of square deviations: 1748737904.5
[2026-03-12 08:48:22] 2026-03-12 08:48:09,221 | INFO     | sum of deviations: -41824285037.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,221 | INFO     | mean x: 1773298994.5
[2026-03-12 08:48:22] 2026-03-12 08:48:09,221 | INFO     | mean y: 2449037.606741573
[2026-03-12 08:48:22] 2026-03-12 08:48:09,221 | INFO     | intersect: 42414157739.60308
[2026-03-12 08:48:22] 2026-03-12 08:48:09,222 | INFO     | chi2: 1.9078279809262648
[2026-03-12 08:48:22] 2026-03-12 08:48:09,222 | INFO     | current chi2=1.9078279809262648 (change=0.3931551271429987 %)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,222 | INFO     | right removable region: 177
[2026-03-12 08:48:22] 2026-03-12 08:48:09,223 | INFO     | sum of square deviations: 1900284932.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,226 | INFO     | sum of deviations: -82933491047.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,226 | INFO     | mean x: 1773299452.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,226 | INFO     | mean y: 2459738.387978142
[2026-03-12 08:48:22] 2026-03-12 08:48:09,226 | INFO     | intersect: 77393966532.74487
[2026-03-12 08:48:22] 2026-03-12 08:48:09,227 | INFO     | chi2: 1.089383665541406
[2026-03-12 08:48:22] 2026-03-12 08:48:09,227 | INFO     | current chi2=1.089383665541406 (change=57.57589602524676 %)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,227 | INFO     | sum of square deviations: 1748737904.5
[2026-03-12 08:48:22] 2026-03-12 08:48:09,230 | INFO     | sum of deviations: -76730167844.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,230 | INFO     | mean x: 1773299604.5
[2026-03-12 08:48:22] 2026-03-12 08:48:09,230 | INFO     | mean y: 2453466.0898876404
[2026-03-12 08:48:22] 2026-03-12 08:48:09,230 | INFO     | intersect: 77810326184.3791
[2026-03-12 08:48:22] 2026-03-12 08:48:09,231 | INFO     | chi2: 1.0859143697563716
[2026-03-12 08:48:22] 2026-03-12 08:48:09,231 | INFO     | current chi2=1.0859143697563716 (change=0.3184640907306267 %)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,231 | INFO     | left removable region: 20
[2026-03-12 08:48:22] 2026-03-12 08:48:09,231 | INFO     | sum of square deviations: 1199940638.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,233 | INFO     | sum of deviations: -45303001454.99999
[2026-03-12 08:48:22] 2026-03-12 08:48:09,233 | INFO     | mean x: 1773299574.0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,233 | INFO     | mean y: 2450013.1656050957
[2026-03-12 08:48:22] 2026-03-12 08:48:09,233 | INFO     | intersect: 66952256226.05667
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | chi2: 0.36824281930861386
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | current memory leak: -37.75 B/s (using 157 data points, chi2=0.37)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | could have reported an average CPU frequency of 3200 MHz (10 samples)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | ..............................
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | . Timing measurements:
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | . get job = 0 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,234 | INFO     | . initial setup = 5 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | . payload setup = 8 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | . stage-in = 0 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | . payload execution = 11418 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | . stage-out = 267 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | . log creation = 0 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,235 | INFO     | ..............................
[2026-03-12 08:48:22] 2026-03-12 08:48:09,333 | INFO     | 
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | job summary report
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | --------------------------------------------------
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | PanDA job id: 7037040485
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | task id: 48838577
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | errors: (none)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | pilot state: finished 
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | transexitcode: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | exeerrorcode: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | exeerrordiag: 
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | exitcode: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | exitmsg: OK
[2026-03-12 08:48:22] 2026-03-12 08:48:09,334 | INFO     | cpuconsumptiontime: 43811 s
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | nevents: 400
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | neventsw: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | pid: 13471
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | pgrp: 13471
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | corecount: 4
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | event service: False
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | sizes: {0: 2280033, 1: 2280239, 11: 2280267, 11430: 2309583, 11698: 2318579, 11701: 2318635, 11704: 2318957}
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | --------------------------------------------------
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | 
[2026-03-12 08:48:22] 2026-03-12 08:48:09,335 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-03-12 08:48:22] 2026-03-12 08:48:09,343 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,343 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,343 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,343 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,345 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:48:22] 2026-03-12 08:48:09,345 | INFO     | job 7037040485 has completed (purged errors)
[2026-03-12 08:48:22] 2026-03-12 08:48:09,345 | INFO     | overall cleanup function is called
[2026-03-12 08:48:22] 2026-03-12 08:48:10,351 | INFO     | --- collectZombieJob: --- 10, [13471]
[2026-03-12 08:48:22] 2026-03-12 08:48:10,353 | INFO     | zombie collector waiting for pid 13471
[2026-03-12 08:48:22] 2026-03-12 08:48:10,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:48:22] 2026-03-12 08:48:10,354 | INFO     | collected zombie processes
[2026-03-12 08:48:22] 2026-03-12 08:48:10,354 | INFO     | will attempt to kill all subprocesses of pid=13471
[2026-03-12 08:48:22] 2026-03-12 08:48:10,430 | INFO     | process IDs to be killed: [13471] (in reverse order)
[2026-03-12 08:48:22] 2026-03-12 08:48:10,459 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:48:22] 2026-03-12 08:48:10,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:48:22] 2026-03-12 08:48:10,462 | INFO     | did not find any defunct processes belonging to 13471
[2026-03-12 08:48:22] 2026-03-12 08:48:10,463 | INFO     | did not find any defunct processes belonging to 13471
[2026-03-12 08:48:22] 2026-03-12 08:48:10,463 | INFO     | ready for new job
[2026-03-12 08:48:22] 2026-03-12 08:48:10,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:48:22] 2026-03-12 08:48:10,465 | INFO     | **************************************
[2026-03-12 08:48:22] 2026-03-12 08:48:10,465 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 08:48:22] 2026-03-12 08:48:10,465 | INFO     | **************************************
[2026-03-12 08:48:22] 2026-03-12 08:48:10,465 | INFO     | 
[2026-03-12 08:48:22] 2026-03-12 08:48:10,482 | INFO     | architecture information:
[2026-03-12 08:48:22] 2026-03-12 08:48:10,483 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:48:22] 2026-03-12 08:48:10,489 | INFO     | cat /etc/os-release:
[2026-03-12 08:48:22] NAME="CentOS Linux"
[2026-03-12 08:48:22] VERSION="7 (Core)"
[2026-03-12 08:48:22] ID="centos"
[2026-03-12 08:48:22] ID_LIKE="rhel fedora"
[2026-03-12 08:48:22] VERSION_ID="7"
[2026-03-12 08:48:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:48:22] ANSI_COLOR="0;31"
[2026-03-12 08:48:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:48:22] HOME_URL="https://www.centos.org/"
[2026-03-12 08:48:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:48:22] 
[2026-03-12 08:48:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:48:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:48:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:48:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:48:22] 
[2026-03-12 08:48:22] 2026-03-12 08:48:10,489 | INFO     | **************************************
[2026-03-12 08:48:22] 2026-03-12 08:48:10,993 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-03-12 08:48:22] 2026-03-12 08:48:11,003 | INFO     | sufficient remaining disk space (418248654848 B)
[2026-03-12 08:48:22] 2026-03-12 08:48:11,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:48:22] 2026-03-12 08:48:11,004 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:48:22] 2026-03-12 08:48:11,004 | INFO     | update_server=False
[2026-03-12 08:48:22] 2026-03-12 08:48:11,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:48:22] 2026-03-12 08:48:11,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:48:22] 2026-03-12 08:48:11,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:48:22] 2026-03-12 08:48:11,005 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-12 08:48:22] 2026-03-12 08:48:11,005 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:48:22] 2026-03-12 08:48:11,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:48:22] 2026-03-12 08:48:11,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:48:22] 2026-03-12 08:48:11,142 | INFO     | all data control threads have been joined
[2026-03-12 08:48:22] 2026-03-12 08:48:11,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:48:22] 2026-03-12 08:48:11,194 | INFO     | aborting loop
[2026-03-12 08:48:22] 2026-03-12 08:48:11,797 | INFO     | all payload control threads have been joined
[2026-03-12 08:48:22] 2026-03-12 08:48:12,010 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,011 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,148 | INFO     | [data] control thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,177 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,198 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,252 | INFO     | all job control threads have been joined
[2026-03-12 08:48:22] 2026-03-12 08:48:12,252 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:48:22] 2026-03-12 08:48:12,279 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,394 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:48:22] 2026-03-12 08:48:12,496 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,556 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:12,803 | INFO     | [payload] control thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:13,010 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:13,200 | INFO     | [job] validate thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:13,258 | INFO     | [job] control thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:13,496 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:13,545 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:16,477 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:48:22] 2026-03-12 08:48:16,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548173104960)>', '<ExcThread(monitor, started 140547721238272)>']
[2026-03-12 08:48:22] 2026-03-12 08:48:17,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:48:22] 2026-03-12 08:48:17,034 | INFO     | [monitor] control thread has ended
[2026-03-12 08:48:22] 2026-03-12 08:48:21,813 | INFO     | all workflow threads have been joined
[2026-03-12 08:48:22] 2026-03-12 08:48:21,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:48:22] 2026-03-12 08:48:21,815 | INFO     | traces error code: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:21,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:48:22] 2026-03-12 08:48:21,923 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:48:22] 2026-03-12 08:48:21,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:48:22] 2026-03-12 08:48:21,927 [wrapper] pilotpid: 9091
[2026-03-12 08:48:22] 2026-03-12 08:48:21,928 [wrapper] Pilot exit status: 0
[2026-03-12 08:48:22] 2026-03-12 08:48:21,942 [wrapper] pandaids: 7037040485
[2026-03-12 08:48:22] 2026-03-12 08:48:21,957 [wrapper] cleanup supervisor_pilot 19767 9092
[2026-03-12 08:48:22] 2026-03-12 08:48:21,960 [wrapper] Test setup, not cleaning
[2026-03-12 08:48:22] 2026-03-12 08:48:21,961 [wrapper] apfmon messages muted
[2026-03-12 08:48:22] 2026-03-12 08:48:21,963 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:48:22] 2026-03-12 08:48:21,965 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:48:22]  *** Error codes and diagnostics ***
[2026-03-12 08:48:22]     "exeErrorCode": 0,
[2026-03-12 08:48:22]     "exeErrorDiag": "",
[2026-03-12 08:48:22]     "pilotErrorCode": 0,
[2026-03-12 08:48:22]     "pilotErrorDiag": "",
[2026-03-12 08:48:22]  *** Listing of results directory ***
[2026-03-12 08:48:22] total 513752
[2026-03-12 08:48:22] -rw-r--r-- 1 m m    584627 Mar  4 01:08 pilot3.tar.gz
[2026-03-12 08:48:22] -rw-r--r-- 1 m m      5111 Mar  4 01:22 queuedata.json
[2026-03-12 08:48:22] -rwx------ 1 m m     36322 Mar  4 01:22 runpilot2-wrapper.sh
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m       100 Mar 12 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:48:22] -rwxr-xr-x 1 m m      7986 Mar 12 05:25 run_atlas
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m       105 Mar 12 05:25 job.xml
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m      6005 Mar 12 05:25 init_data.xml
[2026-03-12 08:48:22] -rw-r--r-- 2 m m 293143056 Mar 12 05:25 EVNT.48220197._000354.pool.root.1
[2026-03-12 08:48:22] -rw-r--r-- 2 m m     15845 Mar 12 05:25 start_atlas.sh
[2026-03-12 08:48:22] drwxrwx--x 2 m m      4096 Mar 12 05:25 shared
[2026-03-12 08:48:22] -rw-r--r-- 2 m m    597975 Mar 12 05:25 input.tar.gz
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m         0 Mar 12 05:25 boinc_lockfile
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m      2567 Mar 12 05:30 pandaJob.out
[2026-03-12 08:48:22] -rw------- 1 m m   1006243 Mar 12 05:32 agis_schedconf.cvmfs.json
[2026-03-12 08:48:22] -rw------- 1 m m       416 Mar 12 05:32 workernode_map.json
[2026-03-12 08:48:22] drwx------ 5 m m      4096 Mar 12 05:32 pilot3
[2026-03-12 08:48:22] -rw------- 1 m m 225000703 Mar 12 08:43 HITS.48838577._008921.pool.root.1
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m       530 Mar 12 08:43 boinc_task_state.xml
[2026-03-12 08:48:22] -rw------- 1 m m      1031 Mar 12 08:43 memory_monitor_summary.json
[2026-03-12 08:48:22] -rw------- 1 m m        96 Mar 12 08:47 pilot_heartbeat.json
[2026-03-12 08:48:22] -rw------- 1 m m   1511578 Mar 12 08:48 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:48:22] -rw------- 1 m m    361681 Mar 12 08:48 log.48838577._008921.job.log.tgz.1
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m      8192 Mar 12 08:48 boinc_mmap_file
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m        28 Mar 12 08:48 wrapper_checkpoint.txt
[2026-03-12 08:48:22] -rw------- 1 m m      6335 Mar 12 08:48 heartbeat.json
[2026-03-12 08:48:22] -rw------- 1 m m      4548 Mar 12 08:48 pilotlog.txt
[2026-03-12 08:48:22] -rw------- 1 m m   1639057 Mar 12 08:48 log.48838577._008921.job.log.1
[2026-03-12 08:48:22] -rw------- 1 m m       357 Mar 12 08:48 output.list
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m       620 Mar 12 08:48 runtime_log
[2026-03-12 08:48:22] -rw------- 1 m m   2017280 Mar 12 08:48 result.tar.gz
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m      8729 Mar 12 08:48 runtime_log.err
[2026-03-12 08:48:22] -rw------- 1 m m       645 Mar 12 08:48 IxnNDma7pH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKoILDmduHUsn.diag
[2026-03-12 08:48:22] -rw-rw-r-- 1 m m     20612 Mar 12 08:48 stderr.txt
[2026-03-12 08:48:22] HITS file was successfully produced:
[2026-03-12 08:48:22] -rw------- 1 m m 225000703 Mar 12 08:43 shared/HITS.pool.root.1
[2026-03-12 08:48:22]  *** Contents of shared directory: ***
[2026-03-12 08:48:22] total 508580
[2026-03-12 08:48:22] -rw-r--r-- 2 m m 293143056 Mar 12 05:25 ATLAS.root_0
[2026-03-12 08:48:22] -rw-r--r-- 2 m m     15845 Mar 12 05:25 start_atlas.sh
[2026-03-12 08:48:22] -rw-r--r-- 2 m m    597975 Mar 12 05:25 input.tar.gz
[2026-03-12 08:48:22] -rw------- 1 m m 225000703 Mar 12 08:43 HITS.pool.root.1
[2026-03-12 08:48:22] -rw------- 1 m m   2017280 Mar 12 08:48 result.tar.gz
08:48:23 (4739): run_atlas exited; CPU time 43930.221330
08:48:23 (4739): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN