Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:23:32 (242889): wrapper (7.7.26015): starting
01:23:32 (242889): wrapper: running run_atlas (--nthreads 9)
[2026-03-12 01:23:32] Arguments: --nthreads 9
[2026-03-12 01:23:32] Threads: 9
[2026-03-12 01:23:32] Checking for CVMFS
[2026-03-12 01:23:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 01:23:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 01:23:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 01:23:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 01:23:36] 2.13.3.0 8127 33722 225888 157185 2 297 25273541 40960001 64932 16776704 0 313361464 99.767 183687257 37705 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 01:23:36] CVMFS is ok
[2026-03-12 01:23:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 01:23:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 01:23:37] Further information can be found at the LHC@home message board.
[2026-03-12 01:23:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 01:23:37] Checking for apptainer binary...
[2026-03-12 01:23:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 01:23:37] Running /usr/bin/apptainer --version
[2026-03-12 01:23:37] apptainer version 1.4.5-2.el9
[2026-03-12 01:23:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 01:23:37] c8-6-11.aglt2.org
[2026-03-12 01:23:37] apptainer works
[2026-03-12 01:23:38] Set ATHENA_PROC_NUMBER=9
[2026-03-12 01:23:38] Set ATHENA_CORE_NUMBER=9
[2026-03-12 01:23:38] Starting ATLAS job with PandaID=7036962972
[2026-03-12 01:23:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 03:30:39]  *** The last 200 lines of the pilot log: ***
[2026-03-12 03:30:39] 2026-03-12 07:29:54,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 03:30:39] 2026-03-12 07:29:54,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 03:30:39] 2026-03-12 07:29:54,438 | INFO     | fitting pss+swap vs Time
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | sum of square deviations: 459385557.236842
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | sum of deviations: 83227251793.50006
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | mean x: 1773297078.6052632
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | mean y: 2299190.1666666665
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | intersect: -321267362297.402
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | chi2: 13.15062805253818
[2026-03-12 03:30:39] 2026-03-12 07:29:54,439 | INFO     | sum of square deviations: 401555574.6788999
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | sum of deviations: 86817778682.55962
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | mean x: 1773296926.1100917
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | mean y: 2307918.0366972475
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | intersect: -383390950144.9271
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | chi2: 12.44724000959495
[2026-03-12 03:30:39] 2026-03-12 07:29:54,440 | INFO     | current chi2=12.44724000959495 (change=5.348703043939183 %)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,498 | INFO     | right removable region: 108
[2026-03-12 03:30:39] 2026-03-12 07:29:54,498 | INFO     | sum of square deviations: 401548254.6788999
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | sum of deviations: 44804487656.22023
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | mean x: 1773297231.1100917
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | mean y: 2400438.981651376
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | intersect: -197860927258.99466
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | chi2: 6.918196274834585
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | current chi2=6.918196274834585 (change=47.39265495765188 %)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | sum of square deviations: 348787706.83653814
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | sum of deviations: 13479301620.31731
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | mean x: 1773297383.6057692
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | mean y: 2490960.471153846
[2026-03-12 03:30:39] 2026-03-12 07:29:54,499 | INFO     | intersect: -68528623604.71023
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | chi2: 3.2197854258410197
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | current chi2=3.2197854258410197 (change=53.459177827128 %)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | sum of square deviations: 300870556.18181854
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | sum of deviations: -11511404145.090906
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | mean x: 1773297536.090909
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | mean y: 2570295.6767676766
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | intersect: 67849503762.64104
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | chi2: 0.9908929317578234
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | current chi2=0.9908929317578234 (change=69.22487679442183 %)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,500 | INFO     | sum of square deviations: 257546068.63829744
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | sum of deviations: -14900915348.29787
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | mean x: 1773297688.5957446
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | mean y: 2581990.255319149
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | intersect: 102600765238.81229
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | chi2: 0.899934164962186
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | current chi2=0.899934164962186 (change=9.17947478283839 %)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | left removable region: 40
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | sum of square deviations: 97496311.80882339
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | sum of deviations: 503077760.6029413
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | mean x: 1773298115.6323528
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | mean y: 2563258.544117647
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | intersect: -9147596663.843884
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | chi2: 8.915730217004756e-05
[2026-03-12 03:30:39] 2026-03-12 07:29:54,501 | INFO     | current memory leak: 5.16 B/s (using 68 data points, chi2=0.00)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,502 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-03-12 03:30:39] 2026-03-12 07:29:54,502 | INFO     | ..............................
[2026-03-12 03:30:39] 2026-03-12 07:29:54,502 | INFO     | . Timing measurements:
[2026-03-12 03:30:39] 2026-03-12 07:29:54,502 | INFO     | . get job = 0 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . initial setup = 122 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . payload setup = 173 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . stage-in = 0 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . payload execution = 7028 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . stage-out = 9 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | . log creation = 1 s
[2026-03-12 03:30:39] 2026-03-12 07:29:54,532 | INFO     | ..............................
[2026-03-12 03:30:39] 2026-03-12 07:29:55,184 | INFO     | time since job start (7236s) is within the limit (349056.0s)
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | 
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | job summary report
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | --------------------------------------------------
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | PanDA job id: 7036962972
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | task id: 48838605
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | errors: (none)
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | pilot state: finished 
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | transexitcode: 0
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | exeerrorcode: 0
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | exeerrordiag: 
[2026-03-12 03:30:39] 2026-03-12 07:29:55,388 | INFO     | exitcode: 0
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | exitmsg: OK
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | cpuconsumptiontime: 25011 s
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | nevents: 400
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | neventsw: 0
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | pid: 290590
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | pgrp: 290590
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | corecount: 9
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | event service: False
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | sizes: {0: 2279754, 1: 2280215, 2: 2280215, 12: 2280243, 7210: 2307462, 7211: 2307461, 7222: 2316699, 7223: 2316837}
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | --------------------------------------------------
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | 
[2026-03-12 03:30:39] 2026-03-12 07:29:55,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 03:30:39] 2026-03-12 07:29:55,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 03:30:39] 2026-03-12 07:29:55,852 | INFO     | job 7036962972 has completed (purged errors)
[2026-03-12 03:30:39] 2026-03-12 07:29:55,852 | INFO     | overall cleanup function is called
[2026-03-12 03:30:39] 2026-03-12 07:29:56,876 | INFO     | --- collectZombieJob: --- 10, [290590]
[2026-03-12 03:30:39] 2026-03-12 07:29:56,876 | INFO     | zombie collector waiting for pid 290590
[2026-03-12 03:30:39] 2026-03-12 07:29:56,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 03:30:39] 2026-03-12 07:29:56,876 | INFO     | collected zombie processes
[2026-03-12 03:30:39] 2026-03-12 07:29:56,876 | INFO     | will attempt to kill all subprocesses of pid=290590
[2026-03-12 03:30:39] 2026-03-12 07:30:00,004 | INFO     | process IDs to be killed: [290590] (in reverse order)
[2026-03-12 03:30:39] 2026-03-12 07:30:02,588 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 03:30:39] 2026-03-12 07:30:02,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 03:30:39] 2026-03-12 07:30:02,720 | INFO     | did not find any defunct processes belonging to 290590
[2026-03-12 03:30:39] 2026-03-12 07:30:03,066 | INFO     | did not find any defunct processes belonging to 290590
[2026-03-12 03:30:39] 2026-03-12 07:30:03,066 | INFO     | ready for new job
[2026-03-12 03:30:39] 2026-03-12 07:30:03,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 03:30:39] 2026-03-12 07:30:03,080 | INFO     | **************************************
[2026-03-12 03:30:39] 2026-03-12 07:30:03,080 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 03:30:39] 2026-03-12 07:30:03,080 | INFO     | **************************************
[2026-03-12 03:30:39] 2026-03-12 07:30:03,080 | INFO     | 
[2026-03-12 03:30:39] 2026-03-12 07:30:03,096 | INFO     | architecture information:
[2026-03-12 03:30:39] 2026-03-12 07:30:03,118 | INFO     | executing command: cat /etc/os-release
[2026-03-12 03:30:39] 2026-03-12 07:30:03,755 | INFO     | cat /etc/os-release:
[2026-03-12 03:30:39] NAME="CentOS Linux"
[2026-03-12 03:30:39] VERSION="7 (Core)"
[2026-03-12 03:30:39] ID="centos"
[2026-03-12 03:30:39] ID_LIKE="rhel fedora"
[2026-03-12 03:30:39] VERSION_ID="7"
[2026-03-12 03:30:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 03:30:39] ANSI_COLOR="0;31"
[2026-03-12 03:30:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 03:30:39] HOME_URL="https://www.centos.org/"
[2026-03-12 03:30:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 03:30:39] 
[2026-03-12 03:30:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 03:30:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 03:30:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 03:30:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 03:30:39] 
[2026-03-12 03:30:39] 2026-03-12 07:30:03,755 | INFO     | **************************************
[2026-03-12 03:30:39] 2026-03-12 07:30:04,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | INFO     | sufficient remaining disk space (168593195008 B)
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | INFO     | update_server=False
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 03:30:39] 2026-03-12 07:30:04,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 03:30:39] 2026-03-12 07:30:04,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 03:30:39] 2026-03-12 07:30:04,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 03:30:39] 2026-03-12 07:30:05,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 03:30:39] 2026-03-12 07:30:05,114 | INFO     | aborting loop
[2026-03-12 03:30:39] 2026-03-12 07:30:05,162 | INFO     | all payload control threads have been joined
[2026-03-12 03:30:39] 2026-03-12 07:30:05,194 | INFO     | all data control threads have been joined
[2026-03-12 03:30:39] 2026-03-12 07:30:05,648 | INFO     | [job] retrieve thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:05,652 | INFO     | [job] queue monitor thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,105 | INFO     | all job control threads have been joined
[2026-03-12 03:30:39] 2026-03-12 07:30:06,121 | INFO     | [job] job monitor thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,168 | INFO     | [payload] control thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,200 | INFO     | [data] control thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,444 | INFO     | [job] validate thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,465 | INFO     | [data] copytool_in thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,524 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,649 | INFO     | [data] copytool_out thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,656 | INFO     | [payload] failed_post thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,656 | INFO     | [payload] validate_post thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,976 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,976 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:06,977 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:07,111 | INFO     | [job] control thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:08,651 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 03:30:39] 2026-03-12 07:30:30,240 | INFO     | PID=259943 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 03:30:39] 2026-03-12 07:30:30,240 | INFO     | .. there are 108 such processes running
[2026-03-12 03:30:39] 2026-03-12 07:30:30,240 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 03:30:39] 2026-03-12 07:30:30,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 03:30:39] 2026-03-12 07:30:30,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 03:30:39] 2026-03-12 07:30:30,464 | INFO     | [monitor] cgroup control has ended
[2026-03-12 03:30:39] 2026-03-12 07:30:31,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229369042752)>', '<ExcThread(monitor, started 140229087606528)>']
[2026-03-12 03:30:39] 2026-03-12 07:30:32,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 03:30:39] 2026-03-12 07:30:32,252 | INFO     | [monitor] control thread has ended
[2026-03-12 03:30:39] 2026-03-12 07:30:36,307 | INFO     | all workflow threads have been joined
[2026-03-12 03:30:39] 2026-03-12 07:30:36,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 03:30:39] 2026-03-12 07:30:36,307 | INFO     | traces error code: 0
[2026-03-12 03:30:39] 2026-03-12 07:30:36,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 03:30:39] 2026-03-12 07:30:36,807 [wrapper] ==== pilot stdout END ====
[2026-03-12 03:30:39] 2026-03-12 07:30:36,872 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 03:30:39] 2026-03-12 07:30:36,912 [wrapper] pilotpid: 259943
[2026-03-12 03:30:39] 2026-03-12 07:30:36,998 [wrapper] Pilot exit status: 0
[2026-03-12 03:30:39] 2026-03-12 07:30:37,216 [wrapper] pandaids: 7036962972
[2026-03-12 03:30:39] 2026-03-12 07:30:37,515 [wrapper] cleanup supervisor_pilot 1304343 259944
[2026-03-12 03:30:39] 2026-03-12 07:30:37,577 [wrapper] Test setup, not cleaning
[2026-03-12 03:30:39] 2026-03-12 07:30:37,907 [wrapper] apfmon messages muted
[2026-03-12 03:30:39] 2026-03-12 07:30:37,998 [wrapper] ==== wrapper stdout END ====
[2026-03-12 03:30:39] 2026-03-12 07:30:38,045 [wrapper] ==== wrapper stderr END ====
[2026-03-12 03:30:39]  *** Error codes and diagnostics ***
[2026-03-12 03:30:39]     "exeErrorCode": 0,
[2026-03-12 03:30:39]     "exeErrorDiag": "",
[2026-03-12 03:30:39]     "pilotErrorCode": 0,
[2026-03-12 03:30:39]     "pilotErrorDiag": "",
[2026-03-12 03:30:39]  *** Listing of results directory ***
[2026-03-12 03:30:39] total 486112
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 20:08 pilot3.tar.gz
[2026-03-12 03:30:39] -rwx------. 1 boincer umatlas     36322 Mar  3 20:10 runpilot2-wrapper.sh
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 20:13 queuedata.json
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas       100 Mar 12 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 03:30:39] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 01:23 run_atlas
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas       105 Mar 12 01:23 job.xml
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas 283292250 Mar 12 01:23 EVNT.48343768._000151.pool.root.1
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 01:23 start_atlas.sh
[2026-03-12 03:30:39] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 01:23 shared
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas    597964 Mar 12 01:23 input.tar.gz
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas         0 Mar 12 01:23 boinc_lockfile
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas      2564 Mar 12 01:23 pandaJob.out
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas        57 Mar 12 01:23 setup.sh.local
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas   1511578 Mar 12 01:27 agis_ddmendpoints.agis.ALL.json
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas       431 Mar 12 01:29 workernode_map.json
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas   1006243 Mar 12 01:29 agis_schedconf.cvmfs.json
[2026-03-12 03:30:39] drwx------. 5 boincer umatlas      4096 Mar 12 01:29 pilot3
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas 208141112 Mar 12 03:28 HITS.48838605._003900.pool.root.1
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas       529 Mar 12 03:28 boinc_task_state.xml
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas      7183 Mar 12 03:28 init_data.xml
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas      1032 Mar 12 03:29 memory_monitor_summary.json
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas    375883 Mar 12 03:29 log.48838605._003900.job.log.tgz.1
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas        95 Mar 12 03:29 pilot_heartbeat.json
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas      6340 Mar 12 03:29 heartbeat.json
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 03:30 boinc_mmap_file
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas        27 Mar 12 03:30 wrapper_checkpoint.txt
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas      4821 Mar 12 03:30 pilotlog.txt
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas    826324 Mar 12 03:30 log.48838605._003900.job.log.1
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas       357 Mar 12 03:30 output.list
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas       620 Mar 12 03:30 runtime_log
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas   1218560 Mar 12 03:30 result.tar.gz
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas      9336 Mar 12 03:30 runtime_log.err
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas       651 Mar 12 03:30 AbNKDmDwpH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWoGLDm6qO08m.diag
[2026-03-12 03:30:39] -rw-r--r--. 1 boincer umatlas     20996 Mar 12 03:30 stderr.txt
[2026-03-12 03:30:39] HITS file was successfully produced:
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas 208141112 Mar 12 03:28 shared/HITS.pool.root.1
[2026-03-12 03:30:39]  *** Contents of shared directory: ***
[2026-03-12 03:30:39] total 481720
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas 283292250 Mar 12 01:23 ATLAS.root_0
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 01:23 start_atlas.sh
[2026-03-12 03:30:39] -rw-r--r--. 2 boincer umatlas    597964 Mar 12 01:23 input.tar.gz
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas 208141112 Mar 12 03:28 HITS.pool.root.1
[2026-03-12 03:30:39] -rw-------. 1 boincer umatlas   1218560 Mar 12 03:30 result.tar.gz
03:30:41 (242889): run_atlas exited; CPU time 25337.432242
03:30:41 (242889): called boinc_finish(0)

</stderr_txt>
]]>

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