Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:20 (3604350): wrapper (7.7.26015): starting
16:53:20 (3604350): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 16:53:20] Arguments: --nthreads 3
[2026-03-12 16:53:20] Threads: 3
[2026-03-12 16:53:20] Checking for CVMFS
[2026-03-12 16:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 16:53:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 16:53:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 16:53:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 16:53:21] 2.9.2.0 209376 21570 83816 157205 1 49 23105665 36864001 0 130560 0 9147192 99.983 811580 11251 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 16:53:21] CVMFS is ok
[2026-03-12 16:53:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 16:53:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 16:53:21] Further information can be found at the LHC@home message board.
[2026-03-12 16:53:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 16:53:21] Checking for apptainer binary...
[2026-03-12 16:53:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 16:53:21] Running /usr/bin/apptainer --version
[2026-03-12 16:53:21] apptainer version 1.4.1-1.1
[2026-03-12 16:53:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 16:53:21] atlasA212
[2026-03-12 16:53:21] apptainer works
[2026-03-12 16:53:21] Set ATHENA_PROC_NUMBER=3
[2026-03-12 16:53:21] Set ATHENA_CORE_NUMBER=3
[2026-03-12 16:53:21] Starting ATLAS job with PandaID=7036983755
[2026-03-12 16:53:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:28:48]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:28:48] 2026-03-12 17:28:17,801 | INFO     | 
[2026-03-12 18:28:48] 2026-03-12 17:28:17,801 | INFO     | architecture information:
[2026-03-12 18:28:48] 2026-03-12 17:28:17,801 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:28:48] 2026-03-12 17:28:17,811 | INFO     | cat /etc/os-release:
[2026-03-12 18:28:48] NAME="CentOS Linux"
[2026-03-12 18:28:48] VERSION="7 (Core)"
[2026-03-12 18:28:48] ID="centos"
[2026-03-12 18:28:48] ID_LIKE="rhel fedora"
[2026-03-12 18:28:48] VERSION_ID="7"
[2026-03-12 18:28:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:28:48] ANSI_COLOR="0;31"
[2026-03-12 18:28:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:28:48] HOME_URL="https://www.centos.org/"
[2026-03-12 18:28:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:28:48] 
[2026-03-12 18:28:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:28:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:28:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:28:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:28:48] 
[2026-03-12 18:28:48] 2026-03-12 17:28:17,811 | INFO     | **************************************
[2026-03-12 18:28:48] 2026-03-12 17:28:18,315 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 18:28:48] 2026-03-12 17:28:18,329 | INFO     | sufficient remaining disk space (381051469824 B)
[2026-03-12 18:28:48] 2026-03-12 17:28:18,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:28:48] 2026-03-12 17:28:18,329 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:28:48] 2026-03-12 17:28:18,329 | INFO     | update_server=False
[2026-03-12 18:28:48] 2026-03-12 17:28:18,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:28:48] 2026-03-12 17:28:18,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:28:48] 2026-03-12 17:28:18,894 | INFO     | all payload control threads have been joined
[2026-03-12 18:28:48] 2026-03-12 17:28:18,960 | INFO     | all data control threads have been joined
[2026-03-12 18:28:48] 2026-03-12 17:28:19,110 | INFO     | all job control threads have been joined
[2026-03-12 18:28:48] 2026-03-12 17:28:19,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:28:48] 2026-03-12 17:28:19,237 | INFO     | aborting loop
[2026-03-12 18:28:48] 2026-03-12 17:28:19,335 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:19,361 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:19,485 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:19,674 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:19,900 | INFO     | [payload] control thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:19,965 | INFO     | [data] control thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,115 | INFO     | [job] control thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,243 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,566 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,680 | INFO     | [job] validate thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,708 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,735 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:20,837 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:21,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:28:48] 2026-03-12 17:28:21,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:28:48] 2026-03-12 17:28:22,241 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:25,738 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:28,769 | INFO     | job.realtimelogging is not enabled
[2026-03-12 18:28:48] 2026-03-12 17:28:29,775 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:28:48] 2026-03-12 17:28:39,714 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:28:48] 2026-03-12 17:28:40,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891147347776)>', '<ExcThread(monitor, started 139890431878912)>']
[2026-03-12 18:28:48] 2026-03-12 17:28:45,978 | INFO     | all workflow threads have been joined
[2026-03-12 18:28:48] 2026-03-12 17:28:45,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:28:48] 2026-03-12 17:28:45,979 | INFO     | traces error code: 0
[2026-03-12 18:28:48] 2026-03-12 17:28:45,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | INFO     | PID=3608397 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:28:48] 2026-03-12 17:28:48,486 | INFO     | [monitor] control thread has ended
[2026-03-12 18:28:48] 2026-03-12 17:28:48,535 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:28:48] 2026-03-12 17:28:48,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:28:48] 2026-03-12 17:28:48,540 [wrapper] pilotpid: 3608397
[2026-03-12 18:28:48] 2026-03-12 17:28:48,542 [wrapper] Pilot exit status: 0
[2026-03-12 18:28:48] 2026-03-12 17:28:48,550 [wrapper] pandaids: 7036983755
[2026-03-12 18:28:48] 2026-03-12 17:28:48,570 [wrapper] cleanup supervisor_pilot 3618801 3608398
[2026-03-12 18:28:48] 2026-03-12 17:28:48,573 [wrapper] Test setup, not cleaning
[2026-03-12 18:28:48] 2026-03-12 17:28:48,575 [wrapper] apfmon messages muted
[2026-03-12 18:28:48] 2026-03-12 17:28:48,578 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:28:48] 2026-03-12 17:28:48,580 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:28:48]  *** Error codes and diagnostics ***
[2026-03-12 18:28:48]     "exeErrorCode": 0,
[2026-03-12 18:28:48]     "exeErrorDiag": "",
[2026-03-12 18:28:48]     "pilotErrorCode": 0,
[2026-03-12 18:28:48]     "pilotErrorDiag": "",
[2026-03-12 18:28:48]  *** Listing of results directory ***
[2026-03-12 18:28:48] total 510408
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:08 pilot3.tar.gz
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:21 queuedata.json
[2026-03-12 18:28:48] -rwx------ 1 boinc boinc     36322 Mar  4 02:21 runpilot2-wrapper.sh
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc       100 Mar 12 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:28:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 16:53 run_atlas
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc       105 Mar 12 16:53 job.xml
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc 293362203 Mar 12 16:53 EVNT.48220197._000339.pool.root.1
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc    597970 Mar 12 16:53 input.tar.gz
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc     15845 Mar 12 16:53 start_atlas.sh
[2026-03-12 18:28:48] drwxrwx--x 2 boinc boinc      4096 Mar 12 16:53 shared
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc         0 Mar 12 16:53 boinc_setup_complete
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      6447 Mar 12 16:53 init_data.xml
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc         0 Mar 12 16:53 boinc_lockfile
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      2564 Mar 12 16:53 pandaJob.out
[2026-03-12 18:28:48] -rw------- 1 boinc boinc   1006536 Mar 12 16:53 agis_schedconf.cvmfs.json
[2026-03-12 18:28:48] -rw------- 1 boinc boinc   1511578 Mar 12 16:53 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:28:48] -rw------- 1 boinc boinc       425 Mar 12 16:53 workernode_map.json
[2026-03-12 18:28:48] drwx------ 5 boinc boinc      4096 Mar 12 16:53 pilot3
[2026-03-12 18:28:48] -rw------- 1 boinc boinc 223218047 Mar 12 18:27 HITS.48838577._008531.pool.root.1
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc       529 Mar 12 18:27 boinc_task_state.xml
[2026-03-12 18:28:48] -rw------- 1 boinc boinc        95 Mar 12 18:28 pilot_heartbeat.json
[2026-03-12 18:28:48] -rw------- 1 boinc boinc      1015 Mar 12 18:28 memory_monitor_summary.json
[2026-03-12 18:28:48] -rw------- 1 boinc boinc    246886 Mar 12 18:28 log.48838577._008531.job.log.tgz.1
[2026-03-12 18:28:48] -rw------- 1 boinc boinc      6297 Mar 12 18:28 heartbeat.json
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      8192 Mar 12 18:28 boinc_mmap_file
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc        27 Mar 12 18:28 wrapper_checkpoint.txt
[2026-03-12 18:28:48] -rw------- 1 boinc boinc       747 Mar 12 18:28 pilotlog.txt
[2026-03-12 18:28:48] -rw------- 1 boinc boinc    828312 Mar 12 18:28 log.48838577._008531.job.log.1
[2026-03-12 18:28:48] -rw------- 1 boinc boinc       357 Mar 12 18:28 output.list
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc       620 Mar 12 18:28 runtime_log
[2026-03-12 18:28:48] -rw------- 1 boinc boinc   1095680 Mar 12 18:28 result.tar.gz
[2026-03-12 18:28:48] -rw------- 1 boinc boinc       660 Mar 12 18:28 uVLMDmS6pH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrlILDm6lwQOm.diag
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      8911 Mar 12 18:28 runtime_log.err
[2026-03-12 18:28:48] -rw-r--r-- 1 boinc boinc      9127 Mar 12 18:28 stderr.txt
[2026-03-12 18:28:48] HITS file was successfully produced:
[2026-03-12 18:28:48] -rw------- 1 boinc boinc 223218047 Mar 12 18:27 shared/HITS.pool.root.1
[2026-03-12 18:28:48]  *** Contents of shared directory: ***
[2026-03-12 18:28:48] total 506156
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc 293362203 Mar 12 16:53 ATLAS.root_0
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc    597970 Mar 12 16:53 input.tar.gz
[2026-03-12 18:28:48] -rw-r--r-- 2 boinc boinc     15845 Mar 12 16:53 start_atlas.sh
[2026-03-12 18:28:48] -rw------- 1 boinc boinc 223218047 Mar 12 18:27 HITS.pool.root.1
[2026-03-12 18:28:48] -rw------- 1 boinc boinc   1095680 Mar 12 18:28 result.tar.gz
18:28:49 (3604350): run_atlas exited; CPU time 16339.969544
18:28:49 (3604350): called boinc_finish(0)

</stderr_txt>
]]>

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