Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:39:17 (315769): wrapper (7.7.26015): starting
17:39:17 (315769): wrapper: running run_atlas (--nthreads 12)
[2026-03-12 17:39:17] Arguments: --nthreads 12
[2026-03-12 17:39:17] Threads: 12
[2026-03-12 17:39:17] Checking for CVMFS
[2026-03-12 17:39:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 17:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 17:39:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 17:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 17:39:18] 2.12.7.0 4877 283 58164 157215 0 188 4179838 4194304 2751 130560 0 733147 99.998 8335 1488 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-12 17:39:18] CVMFS is ok
[2026-03-12 17:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 17:39:18] Checking for apptainer binary...
[2026-03-12 17:39:18] apptainer is not installed, using version from CVMFS
[2026-03-12 17:39:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 17:39:18] Trebeth
[2026-03-12 17:39:18] apptainer works
[2026-03-12 17:39:18] Set ATHENA_PROC_NUMBER=12
[2026-03-12 17:39:18] Set ATHENA_CORE_NUMBER=12
[2026-03-12 17:39:18] Starting ATLAS job with PandaID=7051345684
[2026-03-12 17:39:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 19:02:46]  *** The last 200 lines of the pilot log: ***
[2026-03-12 19:02:46]  status_code=0
[2026-03-12 19:02:46]  storage_token=
[2026-03-12 19:02:46]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/log.48997968._002384.job.log.tgz.1
[2026-03-12 19:02:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/52/log.48997968._002384.job.log.tgz.1
[2026-03-12 19:02:46]  workdir=None
[2026-03-12 19:02:46] ]
[2026-03-12 19:02:46] 2026-03-12 23:01:50,074 | INFO     | transferring file log.48997968._002384.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/log.48997968._002384.job.log.tgz.1 to /var/lib/boinc
[2026-03-12 19:02:46] 2026-03-12 23:01:50,074 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/log.48997968._002384.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.489979
[2026-03-12 19:02:46] 2026-03-12 23:01:50,087 | INFO     | adding to output.list: log.48997968._002384.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/52/log.48997968._002384.job.log.tg
[2026-03-12 19:02:46] 2026-03-12 23:01:50,087 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 19:02:46] 2026-03-12 23:01:50,088 | INFO     | summary of transferred files:
[2026-03-12 19:02:46] 2026-03-12 23:01:50,088 | INFO     |  -- lfn=log.48997968._002384.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 19:02:46] 2026-03-12 23:01:50,088 | INFO     | stage-out finished correctly
[2026-03-12 19:02:46] 2026-03-12 23:01:50,174 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 19:02:46] 2026-03-12 23:01:50,751 | INFO     | PID=320071 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 19:02:46] 2026-03-12 23:01:50,751 | INFO     | .. there are 4 such processes running
[2026-03-12 19:02:46] 2026-03-12 23:01:51,751 | INFO     | time since job start (4938s) is within the limit (345600.0s)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,056 | INFO     | job 7051345684 has state=finished
[2026-03-12 19:02:46] 2026-03-12 23:01:53,057 | INFO     | preparing for final server update for job 7051345684 in state='finished'
[2026-03-12 19:02:46] 2026-03-12 23:01:53,057 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/jobReport.json
[2026-03-12 19:02:46] 2026-03-12 23:01:53,059 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-03-12 19:02:46] 2026-03-12 23:01:53,060 | INFO     | this job has now completed (state=finished)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,060 | INFO     | log transfer has been attempted: DONE
[2026-03-12 19:02:46] 2026-03-12 23:01:53,060 | INFO     | job 7051345684 has finished - writing final server update
[2026-03-12 19:02:46] 2026-03-12 23:01:53,060 | INFO     | total number of processed events: 400 (read)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,088 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,088 | INFO     | extracted standard info from prmon json
[2026-03-12 19:02:46] 2026-03-12 23:01:53,089 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 19:02:46] 2026-03-12 23:01:53,089 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 19:02:46] 2026-03-12 23:01:53,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 19:02:46] 2026-03-12 23:01:53,089 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 19:02:46] 2026-03-12 23:01:53,091 | INFO     | fitting pss+swap vs Time
[2026-03-12 19:02:46] 2026-03-12 23:01:53,091 | INFO     | sum of square deviations: 125630262.5
[2026-03-12 19:02:46] 2026-03-12 23:01:53,091 | INFO     | sum of deviations: 1177563519.9999979
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | mean x: 1773354123.5
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | mean y: 2753928.4054054054
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | intersect: -16619332838.9065
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | chi2: 0.24637410461158285
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | current memory leak: 9.37 B/s (using 74 data points, chi2=0.25)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,092 | INFO     | could have reported an average CPU frequency of 2492 MHz (6 samples)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | ..............................
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . Timing measurements:
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . get job = 0 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . initial setup = 6 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . payload setup = 4 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . stage-in = 0 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . payload execution = 4920 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . stage-out = 0 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,093 | INFO     | . log creation = 0 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,094 | INFO     | ..............................
[2026-03-12 19:02:46] 2026-03-12 23:01:53,180 | INFO     | 
[2026-03-12 19:02:46] 2026-03-12 23:01:53,180 | INFO     | job summary report
[2026-03-12 19:02:46] 2026-03-12 23:01:53,180 | INFO     | --------------------------------------------------
[2026-03-12 19:02:46] 2026-03-12 23:01:53,180 | INFO     | PanDA job id: 7051345684
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | task id: 48997968
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | errors: (none)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | pilot state: finished 
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | transexitcode: 0
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | exeerrorcode: 0
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | exeerrordiag: 
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | exitcode: 0
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | exitmsg: OK
[2026-03-12 19:02:46] 2026-03-12 23:01:53,181 | INFO     | cpuconsumptiontime: 52482 s
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | nevents: 400
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | neventsw: 0
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | pid: 324873
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | pgrp: 324873
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | corecount: 12
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | event service: False
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | sizes: {0: 2280244, 11: 2280244, 4925: 2306552, 4926: 2315620, 4929: 2315758}
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | --------------------------------------------------
[2026-03-12 19:02:46] 2026-03-12 23:01:53,182 | INFO     | 
[2026-03-12 19:02:46] 2026-03-12 23:01:53,183 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | job 7051345684 has completed (purged errors)
[2026-03-12 19:02:46] 2026-03-12 23:01:53,203 | INFO     | overall cleanup function is called
[2026-03-12 19:02:46] 2026-03-12 23:01:54,211 | INFO     | --- collectZombieJob: --- 10, [324873]
[2026-03-12 19:02:46] 2026-03-12 23:01:54,212 | INFO     | zombie collector waiting for pid 324873
[2026-03-12 19:02:46] 2026-03-12 23:01:54,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 19:02:46] 2026-03-12 23:01:54,212 | INFO     | collected zombie processes
[2026-03-12 19:02:46] 2026-03-12 23:01:54,212 | INFO     | will attempt to kill all subprocesses of pid=324873
[2026-03-12 19:02:46] 2026-03-12 23:01:54,448 | INFO     | process IDs to be killed: [324873] (in reverse order)
[2026-03-12 19:02:46] 2026-03-12 23:01:54,510 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 19:02:46] 2026-03-12 23:01:54,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 19:02:46] 2026-03-12 23:01:54,517 | INFO     | did not find any defunct processes belonging to 324873
[2026-03-12 19:02:46] 2026-03-12 23:01:54,522 | INFO     | did not find any defunct processes belonging to 324873
[2026-03-12 19:02:46] 2026-03-12 23:01:54,522 | INFO     | ready for new job
[2026-03-12 19:02:46] 2026-03-12 23:01:54,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 19:02:46] 2026-03-12 23:01:54,524 | INFO     | **************************************
[2026-03-12 19:02:46] 2026-03-12 23:01:54,524 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 19:02:46] 2026-03-12 23:01:54,524 | INFO     | **************************************
[2026-03-12 19:02:46] 2026-03-12 23:01:54,524 | INFO     | 
[2026-03-12 19:02:46] 2026-03-12 23:01:54,545 | INFO     | architecture information:
[2026-03-12 19:02:46] 2026-03-12 23:01:54,546 | INFO     | executing command: cat /etc/os-release
[2026-03-12 19:02:46] 2026-03-12 23:01:54,557 | INFO     | cat /etc/os-release:
[2026-03-12 19:02:46] NAME="CentOS Linux"
[2026-03-12 19:02:46] VERSION="7 (Core)"
[2026-03-12 19:02:46] ID="centos"
[2026-03-12 19:02:46] ID_LIKE="rhel fedora"
[2026-03-12 19:02:46] VERSION_ID="7"
[2026-03-12 19:02:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 19:02:46] ANSI_COLOR="0;31"
[2026-03-12 19:02:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 19:02:46] HOME_URL="https://www.centos.org/"
[2026-03-12 19:02:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 19:02:46] 
[2026-03-12 19:02:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 19:02:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 19:02:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 19:02:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 19:02:46] 
[2026-03-12 19:02:46] 2026-03-12 23:01:54,558 | INFO     | **************************************
[2026-03-12 19:02:46] 2026-03-12 23:01:55,061 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-03-12 19:02:46] 2026-03-12 23:01:55,074 | INFO     | sufficient remaining disk space (398296350720 B)
[2026-03-12 19:02:46] 2026-03-12 23:01:55,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 19:02:46] 2026-03-12 23:01:55,075 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 19:02:46] 2026-03-12 23:01:55,075 | INFO     | update_server=False
[2026-03-12 19:02:46] 2026-03-12 23:01:55,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 19:02:46] 2026-03-12 23:01:55,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:02:46] 2026-03-12 23:01:55,486 | INFO     | all data control threads have been joined
[2026-03-12 19:02:46] 2026-03-12 23:01:55,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 19:02:46] 2026-03-12 23:01:56,004 | INFO     | all payload control threads have been joined
[2026-03-12 19:02:46] 2026-03-12 23:01:56,080 | INFO     | [job] retrieve thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:56,081 | INFO     | [job] queue monitor thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:56,215 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:56,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 19:02:46] 2026-03-12 23:01:56,491 | INFO     | [data] control thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:56,590 | INFO     | all job control threads have been joined
[2026-03-12 19:02:46] 2026-03-12 23:01:56,680 | INFO     | [payload] validate_post thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,008 | INFO     | [job] validate thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,009 | INFO     | [payload] control thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,244 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,262 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,433 | INFO     | [data] copytool_in thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,595 | INFO     | [job] control thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,601 | INFO     | [payload] failed_post thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,618 | WARNING  | process 324873 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 19:02:46] 2026-03-12 23:01:57,687 | INFO     | [data] copytool_out thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:01:57,816 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 19:02:46] 2026-03-12 23:01:57,817 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 19:02:46] 2026-03-12 23:01:57,818 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 19:02:46] 2026-03-12 23:01:57,818 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 19:02:46] 2026-03-12 23:01:57,819 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/payload.stdout) since it has not been created yet
[2026-03-12 19:02:46] 2026-03-12 23:01:57,819 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-03-12 19:02:46] 2026-03-12 23:01:57,834 | INFO     | sufficient remaining disk space (398296350720 B)
[2026-03-12 19:02:46] 2026-03-12 23:01:57,834 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 19:02:46] 2026-03-12 23:01:57,835 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/2/PanDA_Pilot-7051345684/HITS.48997968._002384.pool.root.1 since it does not exist
[2026-03-12 19:02:46] 2026-03-12 23:01:58,049 | INFO     | number of running child processes to parent process 324873: 1
[2026-03-12 19:02:46] 2026-03-12 23:01:58,049 | INFO     | maximum number of monitored processes: 6
[2026-03-12 19:02:46] 2026-03-12 23:01:58,049 | INFO     | aborting job monitoring since job object (job id=7051345684) has expired
[2026-03-12 19:02:46] 2026-03-12 23:01:58,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:02:46] 2026-03-12 23:01:58,050 | INFO     | will abort loop
[2026-03-12 19:02:46] 2026-03-12 23:01:59,054 | INFO     | [job] job monitor thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:02:00,277 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:02:05,605 | INFO     | job.realtimelogging is not enabled
[2026-03-12 19:02:46] 2026-03-12 23:02:06,606 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 19:02:46] 2026-03-12 23:02:25,121 | INFO     | PID=320071 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 19:02:46] 2026-03-12 23:02:25,121 | INFO     | .. there are 4 such processes running
[2026-03-12 19:02:46] 2026-03-12 23:02:25,122 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 19:02:46] 2026-03-12 23:02:25,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 19:02:46] 2026-03-12 23:02:25,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 19:02:46] 2026-03-12 23:02:40,482 | INFO     | [monitor] cgroup control has ended
[2026-03-12 19:02:46] 2026-03-12 23:02:40,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211091240768)>', '<ExcThread(monitor, started 140210666985216)>']
[2026-03-12 19:02:46] 2026-03-12 23:02:41,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 19:02:46] 2026-03-12 23:02:41,191 | INFO     | [monitor] control thread has ended
[2026-03-12 19:02:46] 2026-03-12 23:02:45,956 | INFO     | all workflow threads have been joined
[2026-03-12 19:02:46] 2026-03-12 23:02:45,957 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 19:02:46] 2026-03-12 23:02:45,957 | INFO     | traces error code: 0
[2026-03-12 19:02:46] 2026-03-12 23:02:45,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 19:02:46] 2026-03-12 23:02:46,056 [wrapper] ==== pilot stdout END ====
[2026-03-12 19:02:46] 2026-03-12 23:02:46,058 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 19:02:46] 2026-03-12 23:02:46,060 [wrapper] pilotpid: 320071
[2026-03-12 19:02:46] 2026-03-12 23:02:46,062 [wrapper] Pilot exit status: 0
[2026-03-12 19:02:46] 2026-03-12 23:02:46,069 [wrapper] pandaids: 7051345684
[2026-03-12 19:02:46] 2026-03-12 23:02:46,110 [wrapper] cleanup supervisor_pilot  372564 320072
[2026-03-12 19:02:46] 2026-03-12 23:02:46,113 [wrapper] Test setup, not cleaning
[2026-03-12 19:02:46] 2026-03-12 23:02:46,115 [wrapper] apfmon messages muted
[2026-03-12 19:02:46] 2026-03-12 23:02:46,117 [wrapper] ==== wrapper stdout END ====
[2026-03-12 19:02:46] 2026-03-12 23:02:46,118 [wrapper] ==== wrapper stderr END ====
[2026-03-12 19:02:46]  *** Error codes and diagnostics ***
[2026-03-12 19:02:46]     "exeErrorCode": 0,
[2026-03-12 19:02:46]     "exeErrorDiag": "",
[2026-03-12 19:02:46]     "pilotErrorCode": 0,
[2026-03-12 19:02:46]     "pilotErrorDiag": "",
[2026-03-12 19:02:46]  *** Listing of results directory ***
[2026-03-12 19:02:46] total 645876
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc    585013 Mar 12 00:15 pilot3.tar.gz
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc      5111 Mar 12 00:52 queuedata.json
[2026-03-12 19:02:46] -rwx------ 1 boinc boinc     36322 Mar 12 00:52 runpilot2-wrapper.sh
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc       100 Mar 12 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 19:02:46] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 17:39 run_atlas
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc       105 Mar 12 17:39 job.xml
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc      7579 Mar 12 17:39 init_data.xml
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc 365054457 Mar 12 17:39 EVNT.48997965._000093.pool.root.1
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc     15845 Mar 12 17:39 start_atlas.sh
[2026-03-12 19:02:46] drwxrwx--x 2 boinc boinc      4096 Mar 12 17:39 shared
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc    597533 Mar 12 17:39 input.tar.gz
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc         0 Mar 12 17:39 boinc_lockfile
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc      2565 Mar 12 17:39 pandaJob.out
[2026-03-12 19:02:46] -rw------- 1 boinc boinc        50 Mar 12 17:39 setup.sh.local
[2026-03-12 19:02:46] -rw------- 1 boinc boinc   1006514 Mar 12 17:39 agis_schedconf.cvmfs.json
[2026-03-12 19:02:46] -rw------- 1 boinc boinc   1511578 Mar 12 17:39 agis_ddmendpoints.agis.ALL.json
[2026-03-12 19:02:46] -rw------- 1 boinc boinc       430 Mar 12 17:39 workernode_map.json
[2026-03-12 19:02:46] drwx------ 5 boinc boinc      4096 Mar 12 17:39 pilot3
[2026-03-12 19:02:46] -rw------- 1 boinc boinc 290144718 Mar 12 19:01 HITS.48997968._002384.pool.root.1
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc       531 Mar 12 19:01 boinc_task_state.xml
[2026-03-12 19:02:46] -rw------- 1 boinc boinc        95 Mar 12 19:01 pilot_heartbeat.json
[2026-03-12 19:02:46] -rw------- 1 boinc boinc      1040 Mar 12 19:01 memory_monitor_summary.json
[2026-03-12 19:02:46] -rw------- 1 boinc boinc    382915 Mar 12 19:01 log.48997968._002384.job.log.tgz.1
[2026-03-12 19:02:46] -rw------- 1 boinc boinc      6332 Mar 12 19:01 heartbeat.json
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc      8192 Mar 12 19:02 boinc_mmap_file
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc        27 Mar 12 19:02 wrapper_checkpoint.txt
[2026-03-12 19:02:46] -rw------- 1 boinc boinc      6417 Mar 12 19:02 pilotlog.txt
[2026-03-12 19:02:46] -rw------- 1 boinc boinc    732422 Mar 12 19:02 log.48997968._002384.job.log.1
[2026-03-12 19:02:46] -rw------- 1 boinc boinc       357 Mar 12 19:02 output.list
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc       620 Mar 12 19:02 runtime_log
[2026-03-12 19:02:46] -rw------- 1 boinc boinc   1136640 Mar 12 19:02 result.tar.gz
[2026-03-12 19:02:46] -rw------- 1 boinc boinc       650 Mar 12 19:02 SY0KDmhDnK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm17lLDmAkLJ6m.diag
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc      9403 Mar 12 19:02 runtime_log.err
[2026-03-12 19:02:46] -rw-r--r-- 1 boinc boinc     22082 Mar 12 19:02 stderr.txt
[2026-03-12 19:02:46] HITS file was successfully produced:
[2026-03-12 19:02:46] -rw------- 1 boinc boinc 290144718 Mar 12 19:01 shared/HITS.pool.root.1
[2026-03-12 19:02:46]  *** Contents of shared directory: ***
[2026-03-12 19:02:46] total 641568
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc 365054457 Mar 12 17:39 ATLAS.root_0
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc     15845 Mar 12 17:39 start_atlas.sh
[2026-03-12 19:02:46] -rw-r--r-- 2 boinc boinc    597533 Mar 12 17:39 input.tar.gz
[2026-03-12 19:02:46] -rw------- 1 boinc boinc 290144718 Mar 12 19:01 HITS.pool.root.1
[2026-03-12 19:02:46] -rw------- 1 boinc boinc   1136640 Mar 12 19:02 result.tar.gz
19:02:47 (315769): run_atlas exited; CPU time 52573.253140
19:02:47 (315769): called boinc_finish(0)

</stderr_txt>
]]>

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