Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:28:41 (3814774): wrapper (7.7.26015): starting
07:28:41 (3814774): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 07:28:41] Arguments: --nthreads 4
[2026-03-13 07:28:41] Threads: 4
[2026-03-13 07:28:41] Checking for CVMFS
[2026-03-13 07:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 07:28:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 07:28:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 07:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 07:28:41] 2.9.2.0 3074 20943 106904 157230 0 49 29555765 36864000 0 130560 0 9564560 99.985 788123 14285 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 07:28:41] CVMFS is ok
[2026-03-13 07:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 07:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 07:28:41] Further information can be found at the LHC@home message board.
[2026-03-13 07:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:28:41] Checking for apptainer binary...
[2026-03-13 07:28:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 07:28:41] Running /usr/bin/apptainer --version
[2026-03-13 07:28:41] apptainer version 1.4.1-1.1
[2026-03-13 07:28:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:28:41] thA314
[2026-03-13 07:28:41] apptainer works
[2026-03-13 07:28:41] Set ATHENA_PROC_NUMBER=4
[2026-03-13 07:28:41] Set ATHENA_CORE_NUMBER=4
[2026-03-13 07:28:41] Starting ATLAS job with PandaID=7051217985
[2026-03-13 07:28:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 09:00:23]  *** The last 200 lines of the pilot log: ***
[2026-03-13 09:00:23] 2026-03-13 07:59:52,582 | INFO     | executing command: cat /etc/os-release
[2026-03-13 09:00:23] 2026-03-13 07:59:52,596 | INFO     | cat /etc/os-release:
[2026-03-13 09:00:23] NAME="CentOS Linux"
[2026-03-13 09:00:23] VERSION="7 (Core)"
[2026-03-13 09:00:23] ID="centos"
[2026-03-13 09:00:23] ID_LIKE="rhel fedora"
[2026-03-13 09:00:23] VERSION_ID="7"
[2026-03-13 09:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 09:00:23] ANSI_COLOR="0;31"
[2026-03-13 09:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 09:00:23] HOME_URL="https://www.centos.org/"
[2026-03-13 09:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 09:00:23] 
[2026-03-13 09:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 09:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 09:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 09:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 09:00:23] 
[2026-03-13 09:00:23] 2026-03-13 07:59:52,597 | INFO     | **************************************
[2026-03-13 09:00:23] 2026-03-13 07:59:53,098 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 09:00:23] 2026-03-13 07:59:53,115 | INFO     | sufficient remaining disk space (226130657280 B)
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | INFO     | update_server=False
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | INFO     | aborting loop
[2026-03-13 09:00:23] 2026-03-13 07:59:53,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:00:23] 2026-03-13 07:59:53,140 | INFO     | all data control threads have been joined
[2026-03-13 09:00:23] 2026-03-13 07:59:54,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 09:00:23] 2026-03-13 07:59:54,121 | INFO     | [job] retrieve thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,122 | INFO     | [job] job monitor thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,122 | INFO     | [job] queue monitor thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,145 | INFO     | [data] control thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,225 | INFO     | [data] copytool_in thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,278 | INFO     | all payload control threads have been joined
[2026-03-13 09:00:23] 2026-03-13 07:59:54,342 | INFO     | all job control threads have been joined
[2026-03-13 09:00:23] 2026-03-13 07:59:54,381 | INFO     | [payload] validate_post thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,566 | INFO     | [payload] failed_post thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:54,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 09:00:23] 2026-03-13 07:59:55,283 | INFO     | [payload] control thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:55,348 | INFO     | [job] control thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:55,393 | INFO     | [job] validate thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:55,446 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:55,520 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:55,578 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:56,125 | INFO     | [data] copytool_out thread has finished
[2026-03-13 09:00:23] 2026-03-13 07:59:58,869 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 09:00:23] 2026-03-13 08:00:00,408 | INFO     | [monitor] cgroup control has ended
[2026-03-13 09:00:23] 2026-03-13 08:00:03,272 | INFO     | job.realtimelogging is not enabled
[2026-03-13 09:00:23] 2026-03-13 08:00:04,278 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 09:00:23] 2026-03-13 08:00:06,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338007930688)>', '<ExcThread(monitor, started 140337376913152)>']
[2026-03-13 09:00:23] 2026-03-13 08:00:11,332 | INFO     | all workflow threads have been joined
[2026-03-13 09:00:23] 2026-03-13 08:00:11,332 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 09:00:23] 2026-03-13 08:00:11,333 | INFO     | traces error code: 0
[2026-03-13 09:00:23] 2026-03-13 08:00:11,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 09:00:23] 2026-03-13 08:00:23,457 | INFO     | PID=3818902 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | CRITICAL | thread 'MainThread' is not alive
[2026-03-13 09:00:23] 2026-03-13 08:00:23,458 | INFO     | [monitor] control thread has ended
[2026-03-13 09:00:23] 2026-03-13 08:00:23,533 [wrapper] ==== pilot stdout END ====
[2026-03-13 09:00:23] 2026-03-13 08:00:23,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 09:00:23] 2026-03-13 08:00:23,541 [wrapper] pilotpid: 3818902
[2026-03-13 09:00:23] 2026-03-13 08:00:23,545 [wrapper] Pilot exit status: 0
[2026-03-13 09:00:23] 2026-03-13 08:00:23,557 [wrapper] pandaids: 7051217985
[2026-03-13 09:00:23] 2026-03-13 08:00:23,578 [wrapper] cleanup supervisor_pilot 3830592 3818903
[2026-03-13 09:00:23] 2026-03-13 08:00:23,582 [wrapper] Test setup, not cleaning
[2026-03-13 09:00:23] 2026-03-13 08:00:23,586 [wrapper] apfmon messages muted
[2026-03-13 09:00:23] 2026-03-13 08:00:23,589 [wrapper] ==== wrapper stdout END ====
[2026-03-13 09:00:23] 2026-03-13 08:00:23,594 [wrapper] ==== wrapper stderr END ====
[2026-03-13 09:00:23]  *** Error codes and diagnostics ***
[2026-03-13 09:00:23]     "exeErrorCode": 0,
[2026-03-13 09:00:23]     "exeErrorDiag": "",
[2026-03-13 09:00:23]     "pilotErrorCode": 0,
[2026-03-13 09:00:23]     "pilotErrorDiag": "",
[2026-03-13 09:00:23]  *** Listing of results directory ***
[2026-03-13 09:00:23] total 557900
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc    585013 Mar 12 05:15 pilot3.tar.gz
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      5111 Mar 12 05:52 queuedata.json
[2026-03-13 09:00:23] -rwx------ 1 boinc boinc     36322 Mar 12 05:52 runpilot2-wrapper.sh
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc       100 Mar 13 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 09:00:23] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 07:28 run_atlas
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc       105 Mar 13 07:28 job.xml
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc 322586806 Mar 13 07:28 EVNT.48997945._000079.pool.root.1
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc    597538 Mar 13 07:28 input.tar.gz
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc     15845 Mar 13 07:28 start_atlas.sh
[2026-03-13 09:00:23] drwxrwx--x 2 boinc boinc      4096 Mar 13 07:28 shared
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc         0 Mar 13 07:28 boinc_setup_complete
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      6376 Mar 13 07:28 init_data.xml
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc         0 Mar 13 07:28 boinc_lockfile
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      2568 Mar 13 07:28 pandaJob.out
[2026-03-13 09:00:23] -rw------- 1 boinc boinc   1006522 Mar 13 07:28 agis_schedconf.cvmfs.json
[2026-03-13 09:00:23] -rw------- 1 boinc boinc   1511578 Mar 13 07:28 agis_ddmendpoints.agis.ALL.json
[2026-03-13 09:00:23] -rw------- 1 boinc boinc       420 Mar 13 07:28 workernode_map.json
[2026-03-13 09:00:23] drwx------ 5 boinc boinc      4096 Mar 13 07:28 pilot3
[2026-03-13 09:00:23] -rw------- 1 boinc boinc 242659852 Mar 13 08:59 HITS.48997948._002079.pool.root.1
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc       529 Mar 13 08:59 boinc_task_state.xml
[2026-03-13 09:00:23] -rw------- 1 boinc boinc      1019 Mar 13 08:59 memory_monitor_summary.json
[2026-03-13 09:00:23] -rw------- 1 boinc boinc    265984 Mar 13 08:59 log.48997948._002079.job.log.tgz.1
[2026-03-13 09:00:23] -rw------- 1 boinc boinc      6300 Mar 13 08:59 heartbeat.json
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc        27 Mar 13 08:59 wrapper_checkpoint.txt
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      8192 Mar 13 08:59 boinc_mmap_file
[2026-03-13 09:00:23] -rw------- 1 boinc boinc       817 Mar 13 09:00 pilotlog.txt
[2026-03-13 09:00:23] -rw------- 1 boinc boinc        95 Mar 13 09:00 pilot_heartbeat.json
[2026-03-13 09:00:23] -rw------- 1 boinc boinc    795620 Mar 13 09:00 log.48997948._002079.job.log.1
[2026-03-13 09:00:23] -rw------- 1 boinc boinc       357 Mar 13 09:00 output.list
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc       620 Mar 13 09:00 runtime_log
[2026-03-13 09:00:23] -rw------- 1 boinc boinc   1075200 Mar 13 09:00 result.tar.gz
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      8896 Mar 13 09:00 runtime_log.err
[2026-03-13 09:00:23] -rw------- 1 boinc boinc       657 Mar 13 09:00 In4MDmMDnK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyHjLDmEAohFo.diag
[2026-03-13 09:00:23] -rw-r--r-- 1 boinc boinc      9070 Mar 13 09:00 stderr.txt
[2026-03-13 09:00:23] HITS file was successfully produced:
[2026-03-13 09:00:23] -rw------- 1 boinc boinc 242659852 Mar 13 08:59 shared/HITS.pool.root.1
[2026-03-13 09:00:23]  *** Contents of shared directory: ***
[2026-03-13 09:00:23] total 553664
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc 322586806 Mar 13 07:28 ATLAS.root_0
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc    597538 Mar 13 07:28 input.tar.gz
[2026-03-13 09:00:23] -rw-r--r-- 2 boinc boinc     15845 Mar 13 07:28 start_atlas.sh
[2026-03-13 09:00:23] -rw------- 1 boinc boinc 242659852 Mar 13 08:59 HITS.pool.root.1
[2026-03-13 09:00:23] -rw------- 1 boinc boinc   1075200 Mar 13 09:00 result.tar.gz
09:00:25 (3814774): run_atlas exited; CPU time 20755.758020
09:00:25 (3814774): called boinc_finish(0)

</stderr_txt>
]]>

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