Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:28:10 (31692): wrapper (7.7.26015): starting
20:28:10 (31692): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 20:28:10] Arguments: --nthreads 8
[2026-03-12 20:28:10] Threads: 8
[2026-03-12 20:28:10] Checking for CVMFS
[2026-03-12 20:28:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 20:28:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 20:28:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 20:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 20:28:11] 2.11.2.0 20422 125114 132992 157213 3 117 22039876 25165825 94 130560 162 27435301 99.793 25525385 887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 20:28:11] CVMFS is ok
[2026-03-12 20:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 20:28:11] Checking for apptainer binary...
[2026-03-12 20:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 20:28:11] Running /usr/bin/apptainer --version
[2026-03-12 20:28:11] apptainer version 1.3.2-1.el7
[2026-03-12 20:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 20:28:12] cg-vwn357.simple-grid.lan
[2026-03-12 20:28:12] apptainer works
[2026-03-12 20:28:12] Set ATHENA_PROC_NUMBER=8
[2026-03-12 20:28:12] Set ATHENA_CORE_NUMBER=8
[2026-03-12 20:28:12] Starting ATLAS job with PandaID=7051268204
[2026-03-12 20:28:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 01:52:24]  *** The last 200 lines of the pilot log: ***
[2026-03-13 01:52:24] 2026-03-13 00:51:29,587 | INFO     | total number of processed events: 400 (read)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,589 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-7051268204/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,590 | INFO     | extracted standard info from prmon json
[2026-03-13 01:52:24] 2026-03-13 00:51:29,590 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 01:52:24] 2026-03-13 00:51:29,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 01:52:24] 2026-03-13 00:51:29,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 01:52:24] 2026-03-13 00:51:29,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 01:52:24] 2026-03-13 00:51:29,597 | INFO     | fitting pss+swap vs Time
[2026-03-13 01:52:24] 2026-03-13 00:51:29,598 | INFO     | sum of square deviations: 9877610318.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,601 | INFO     | sum of deviations: -40376422892.000015
[2026-03-13 01:52:24] 2026-03-13 00:51:29,601 | INFO     | mean x: 1773353387.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,601 | INFO     | mean y: 2532334.0126182963
[2026-03-13 01:52:24] 2026-03-13 00:51:29,601 | INFO     | intersect: 7251417842.281013
[2026-03-13 01:52:24] 2026-03-13 00:51:29,602 | INFO     | chi2: 2.521893839712794
[2026-03-13 01:52:24] 2026-03-13 00:51:29,603 | INFO     | sum of square deviations: 9417545878.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,606 | INFO     | sum of deviations: -18609052870.499996
[2026-03-13 01:52:24] 2026-03-13 00:51:29,606 | INFO     | mean x: 1773353234.5
[2026-03-13 01:52:24] 2026-03-13 00:51:29,606 | INFO     | mean y: 2539459.0993589745
[2026-03-13 01:52:24] 2026-03-13 00:51:29,606 | INFO     | intersect: 3506682101.6081486
[2026-03-13 01:52:24] 2026-03-13 00:51:29,607 | INFO     | chi2: 1.7488348994812357
[2026-03-13 01:52:24] 2026-03-13 00:51:29,607 | INFO     | current chi2=1.7488348994812357 (change=30.653904936759673 %)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,607 | INFO     | sum of square deviations: 8971993338.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,610 | INFO     | sum of deviations: -18487183562.999996
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | mean x: 1773353082.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | mean y: 2539500.8175895764
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | intersect: 3656610866.440552
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | chi2: 1.7479430878799782
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | current chi2=1.7479430878799782 (change=0.05099461370093027 %)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,611 | INFO     | right removable region: 306
[2026-03-13 01:52:24] 2026-03-13 00:51:29,612 | INFO     | sum of square deviations: 9417545878.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,615 | INFO     | sum of deviations: -89525922727.5
[2026-03-13 01:52:24] 2026-03-13 00:51:29,615 | INFO     | mean x: 1773353539.5
[2026-03-13 01:52:24] 2026-03-13 00:51:29,615 | INFO     | mean y: 2548507.5865384615
[2026-03-13 01:52:24] 2026-03-13 00:51:29,616 | INFO     | intersect: 16860561625.068867
[2026-03-13 01:52:24] 2026-03-13 00:51:29,616 | INFO     | chi2: 1.054406256059628
[2026-03-13 01:52:24] 2026-03-13 00:51:29,616 | INFO     | current chi2=1.054406256059628 (change=58.18990318086866 %)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,617 | INFO     | sum of square deviations: 8971993338.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,620 | INFO     | sum of deviations: -90010940162.99998
[2026-03-13 01:52:24] 2026-03-13 00:51:29,620 | INFO     | mean x: 1773353692.0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,620 | INFO     | mean y: 2548655.5081433225
[2026-03-13 01:52:24] 2026-03-13 00:51:29,620 | INFO     | intersect: 17793604337.904495
[2026-03-13 01:52:24] 2026-03-13 00:51:29,621 | INFO     | chi2: 1.0344182565983793
[2026-03-13 01:52:24] 2026-03-13 00:51:29,621 | INFO     | current chi2=1.0344182565983793 (change=1.8956639669366953 %)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,621 | INFO     | left removable region: 20
[2026-03-13 01:52:24] 2026-03-13 00:51:29,622 | INFO     | sum of square deviations: 7253894147.5
[2026-03-13 01:52:24] 2026-03-13 00:51:29,624 | INFO     | sum of deviations: -49632910775.000015
[2026-03-13 01:52:24] 2026-03-13 00:51:29,624 | INFO     | mean x: 1773353661.5
[2026-03-13 01:52:24] 2026-03-13 00:51:29,625 | INFO     | mean y: 2549912.006993007
[2026-03-13 01:52:24] 2026-03-13 00:51:29,625 | INFO     | intersect: 12136267645.410006
[2026-03-13 01:52:24] 2026-03-13 00:51:29,625 | INFO     | chi2: 0.2187270851934149
[2026-03-13 01:52:24] 2026-03-13 00:51:29,625 | INFO     | current memory leak: -6.84 B/s (using 286 data points, chi2=0.22)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,626 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,626 | INFO     | ..............................
[2026-03-13 01:52:24] 2026-03-13 00:51:29,626 | INFO     | . Timing measurements:
[2026-03-13 01:52:24] 2026-03-13 00:51:29,626 | INFO     | . get job = 0 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . initial setup = 8 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . payload setup = 9 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . stage-in = 0 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . payload execution = 19338 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . stage-out = 4 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | . log creation = 1 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,627 | INFO     | ..............................
[2026-03-13 01:52:24] 2026-03-13 00:51:29,751 | INFO     | 
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | job summary report
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | --------------------------------------------------
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | PanDA job id: 7051268204
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | task id: 48997948
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | errors: (none)
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | pilot state: finished 
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | transexitcode: 0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,752 | INFO     | exeerrorcode: 0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | exeerrordiag: 
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | exitcode: 0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | exitmsg: OK
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | cpuconsumptiontime: 73337 s
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | nevents: 400
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | neventsw: 0
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | pid: 7790
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | pgrp: 7790
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | corecount: 8
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | event service: False
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | sizes: {0: 2279811, 1: 2280272, 11: 2280272, 19352: 2313289, 19356: 2322289, 19358: 2322345, 19360: 2322667}
[2026-03-13 01:52:24] 2026-03-13 00:51:29,753 | INFO     | --------------------------------------------------
[2026-03-13 01:52:24] 2026-03-13 00:51:29,754 | INFO     | 
[2026-03-13 01:52:24] 2026-03-13 00:51:29,754 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2026-03-13 01:52:24] 2026-03-13 00:51:30,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 01:52:24] 2026-03-13 00:51:30,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,175 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 01:52:24] 2026-03-13 00:51:30,175 | INFO     | job 7051268204 has completed (purged errors)
[2026-03-13 01:52:24] 2026-03-13 00:51:30,175 | INFO     | overall cleanup function is called
[2026-03-13 01:52:24] 2026-03-13 00:51:31,183 | INFO     | --- collectZombieJob: --- 10, [7790]
[2026-03-13 01:52:24] 2026-03-13 00:51:31,184 | INFO     | zombie collector waiting for pid 7790
[2026-03-13 01:52:24] 2026-03-13 00:51:31,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 01:52:24] 2026-03-13 00:51:31,184 | INFO     | collected zombie processes
[2026-03-13 01:52:24] 2026-03-13 00:51:31,184 | INFO     | will attempt to kill all subprocesses of pid=7790
[2026-03-13 01:52:24] 2026-03-13 00:51:31,258 | INFO     | process IDs to be killed: [7790] (in reverse order)
[2026-03-13 01:52:24] 2026-03-13 00:51:31,986 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 01:52:24] 2026-03-13 00:51:31,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 01:52:24] 2026-03-13 00:51:31,989 | INFO     | did not find any defunct processes belonging to 7790
[2026-03-13 01:52:24] 2026-03-13 00:51:31,991 | INFO     | did not find any defunct processes belonging to 7790
[2026-03-13 01:52:24] 2026-03-13 00:51:31,991 | INFO     | ready for new job
[2026-03-13 01:52:24] 2026-03-13 00:51:31,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 01:52:24] 2026-03-13 00:51:31,993 | INFO     | **************************************
[2026-03-13 01:52:24] 2026-03-13 00:51:31,994 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 01:52:24] 2026-03-13 00:51:31,994 | INFO     | **************************************
[2026-03-13 01:52:24] 2026-03-13 00:51:31,994 | INFO     | 
[2026-03-13 01:52:24] 2026-03-13 00:51:31,994 | INFO     | pilot is running in a VM
[2026-03-13 01:52:24] 2026-03-13 00:51:31,995 | INFO     | architecture information:
[2026-03-13 01:52:24] 2026-03-13 00:51:32,001 | INFO     | executing command: cat /etc/os-release
[2026-03-13 01:52:24] 2026-03-13 00:51:32,274 | INFO     | cat /etc/os-release:
[2026-03-13 01:52:24] NAME="CentOS Linux"
[2026-03-13 01:52:24] VERSION="7 (Core)"
[2026-03-13 01:52:24] ID="centos"
[2026-03-13 01:52:24] ID_LIKE="rhel fedora"
[2026-03-13 01:52:24] VERSION_ID="7"
[2026-03-13 01:52:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 01:52:24] ANSI_COLOR="0;31"
[2026-03-13 01:52:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 01:52:24] HOME_URL="https://www.centos.org/"
[2026-03-13 01:52:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 01:52:24] 
[2026-03-13 01:52:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 01:52:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 01:52:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 01:52:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 01:52:24] 
[2026-03-13 01:52:24] 2026-03-13 00:51:32,281 | INFO     | **************************************
[2026-03-13 01:52:24] 2026-03-13 00:51:32,785 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2026-03-13 01:52:24] 2026-03-13 00:51:33,031 | INFO     | sufficient remaining disk space (495511928832 B)
[2026-03-13 01:52:24] 2026-03-13 00:51:33,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 01:52:24] 2026-03-13 00:51:33,032 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 01:52:24] 2026-03-13 00:51:33,032 | INFO     | update_server=False
[2026-03-13 01:52:24] 2026-03-13 00:51:33,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 01:52:24] 2026-03-13 00:51:33,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:52:24] 2026-03-13 00:51:33,149 | INFO     | aborting loop
[2026-03-13 01:52:24] 2026-03-13 00:51:33,502 | INFO     | all data control threads have been joined
[2026-03-13 01:52:24] 2026-03-13 00:51:33,994 | INFO     | all payload control threads have been joined
[2026-03-13 01:52:24] 2026-03-13 00:51:33,998 | INFO     | all job control threads have been joined
[2026-03-13 01:52:24] 2026-03-13 00:51:34,038 | INFO     | [job] retrieve thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,155 | INFO     | [job] job monitor thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 01:52:24] 2026-03-13 00:51:34,337 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,353 | INFO     | [job] validate thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,364 | INFO     | [payload] validate_post thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 01:52:24] 2026-03-13 00:51:34,509 | INFO     | [data] control thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:34,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:52:24] 2026-03-13 00:51:34,973 | INFO     | [payload] failed_post thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,000 | INFO     | [payload] control thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,005 | INFO     | [job] control thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,019 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,247 | INFO     | [data] copytool_in thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,304 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:35,764 | INFO     | [job] queue monitor thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:36,402 | INFO     | [data] copytool_out thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:38,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:51:43,422 | INFO     | job.realtimelogging is not enabled
[2026-03-13 01:52:24] 2026-03-13 00:51:44,428 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 01:52:24] 2026-03-13 00:52:01,510 | INFO     | 19381s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-13 01:52:24] 2026-03-13 00:52:02,624 | INFO     | PID=3355 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-13 01:52:24] 2026-03-13 00:52:02,624 | INFO     | .. there are 2 such processes running
[2026-03-13 01:52:24] 2026-03-13 00:52:02,624 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 01:52:24] 2026-03-13 00:52:02,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 01:52:24] 2026-03-13 00:52:02,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 01:52:24] 2026-03-13 00:52:12,027 | INFO     | [monitor] cgroup control has ended
[2026-03-13 01:52:24] 2026-03-13 00:52:13,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232931067712)>', '<ExcThread(monitor, started 140232704349952)>']
[2026-03-13 01:52:24] 2026-03-13 00:52:13,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 01:52:24] 2026-03-13 00:52:13,693 | INFO     | [monitor] control thread has ended
[2026-03-13 01:52:24] 2026-03-13 00:52:18,657 | INFO     | all workflow threads have been joined
[2026-03-13 01:52:24] 2026-03-13 00:52:18,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 01:52:24] 2026-03-13 00:52:18,658 | INFO     | traces error code: 0
[2026-03-13 01:52:24] 2026-03-13 00:52:18,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 01:52:24] 2026-03-13 00:52:19,090 [wrapper] ==== pilot stdout END ====
[2026-03-13 01:52:24] 2026-03-13 00:52:19,194 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 01:52:24] 2026-03-13 00:52:19,292 [wrapper] pilotpid: 3355
[2026-03-13 01:52:24] 2026-03-13 00:52:19,386 [wrapper] Pilot exit status: 0
[2026-03-13 01:52:24] 2026-03-13 00:52:19,876 [wrapper] pandaids: 7051268204
[2026-03-13 01:52:24] 2026-03-13 00:52:20,973 [wrapper] cleanup supervisor_pilot 30471 3356
[2026-03-13 01:52:24] 2026-03-13 00:52:21,065 [wrapper] Test setup, not cleaning
[2026-03-13 01:52:24] 2026-03-13 00:52:21,197 [wrapper] apfmon messages muted
[2026-03-13 01:52:24] 2026-03-13 00:52:21,305 [wrapper] ==== wrapper stdout END ====
[2026-03-13 01:52:24] 2026-03-13 00:52:21,406 [wrapper] ==== wrapper stderr END ====
[2026-03-13 01:52:24]  *** Error codes and diagnostics ***
[2026-03-13 01:52:24]     "exeErrorCode": 0,
[2026-03-13 01:52:24]     "exeErrorDiag": "",
[2026-03-13 01:52:24]     "pilotErrorCode": 0,
[2026-03-13 01:52:24]     "pilotErrorDiag": "",
[2026-03-13 01:52:24]  *** Listing of results directory ***
[2026-03-13 01:52:24] total 556956
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc    585013 Mar 12 05:15 pilot3.tar.gz
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc      5111 Mar 12 05:51 queuedata.json
[2026-03-13 01:52:24] -rwx------. 1 boinc boinc     36322 Mar 12 05:51 runpilot2-wrapper.sh
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc       100 Mar 12 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 01:52:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 20:28 run_atlas
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc       105 Mar 12 20:28 job.xml
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc      6392 Mar 12 20:28 init_data.xml
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc 321136253 Mar 12 20:28 EVNT.48997945._000086.pool.root.1
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:28 start_atlas.sh
[2026-03-13 01:52:24] drwxrwx--x. 2 boinc boinc        68 Mar 12 20:28 shared
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc    597530 Mar 12 20:28 input.tar.gz
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc         0 Mar 12 20:28 boinc_lockfile
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc      2568 Mar 12 20:28 pandaJob.out
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc   1006522 Mar 12 20:28 agis_schedconf.cvmfs.json
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc       415 Mar 12 20:28 workernode_map.json
[2026-03-13 01:52:24] drwx------. 5 boinc boinc      4096 Mar 12 20:28 pilot3
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc 238833250 Mar 13 01:49 HITS.48997948._002207.pool.root.1
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc       530 Mar 13 01:50 boinc_task_state.xml
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc      1016 Mar 13 01:51 memory_monitor_summary.json
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc        95 Mar 13 01:51 pilot_heartbeat.json
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc   1511578 Mar 13 01:51 agis_ddmendpoints.agis.ALL.json
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc    517459 Mar 13 01:51 log.48997948._002207.job.log.tgz.1
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc      6306 Mar 13 01:51 heartbeat.json
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc      8192 Mar 13 01:52 boinc_mmap_file
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc        28 Mar 13 01:52 wrapper_checkpoint.txt
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc      5068 Mar 13 01:52 pilotlog.txt
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc   2697100 Mar 13 01:52 log.48997948._002207.job.log.1
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc       357 Mar 13 01:52 output.list
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc       620 Mar 13 01:52 runtime_log
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc   3235840 Mar 13 01:52 result.tar.gz
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc      8832 Mar 13 01:52 runtime_log.err
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc       655 Mar 13 01:52 JheLDmCCnK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgGjLDmue5JYm.diag
[2026-03-13 01:52:24] -rw-r--r--. 1 boinc boinc     20717 Mar 13 01:52 stderr.txt
[2026-03-13 01:52:24] HITS file was successfully produced:
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc 238833250 Mar 13 01:49 shared/HITS.pool.root.1
[2026-03-13 01:52:24]  *** Contents of shared directory: ***
[2026-03-13 01:52:24] total 550608
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc 321136253 Mar 12 20:28 ATLAS.root_0
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc     15845 Mar 12 20:28 start_atlas.sh
[2026-03-13 01:52:24] -rw-r--r--. 2 boinc boinc    597530 Mar 12 20:28 input.tar.gz
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc 238833250 Mar 13 01:49 HITS.pool.root.1
[2026-03-13 01:52:24] -rw-------. 1 boinc boinc   3235840 Mar 13 01:52 result.tar.gz
01:52:25 (31692): run_atlas exited; CPU time 73532.419860
01:52:25 (31692): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN