Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:43:50 (3184699): wrapper (7.7.26015): starting
07:43:50 (3184699): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 07:43:50] Arguments: --nthreads 4
[2026-03-14 07:43:50] Threads: 4
[2026-03-14 07:43:50] Checking for CVMFS
[2026-03-14 07:43:50] No cvmfs_config command found, will try listing directly
[2026-03-14 07:43:50] CVMFS is ok
[2026-03-14 07:43:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 07:43:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 07:43:50] Further information can be found at the LHC@home message board.
[2026-03-14 07:43:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 07:43:50] Checking for apptainer binary...
[2026-03-14 07:43:50] which: no apptainer in ((null))
[2026-03-14 07:43:50] apptainer is not installed, using version from CVMFS
[2026-03-14 07:43:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 07:43:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-14 07:43:50] apptainer works
[2026-03-14 07:43:50] Set ATHENA_PROC_NUMBER=4
[2026-03-14 07:43:50] Set ATHENA_CORE_NUMBER=4
[2026-03-14 07:43:50] Starting ATLAS job with PandaID=7050439184
[2026-03-14 07:43:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 09:30:19]  *** The last 200 lines of the pilot log: ***
[2026-03-14 09:30:19] 2026-03-14 08:29:40,137 | INFO     | mean x: 1773473804.5
[2026-03-14 09:30:19] 2026-03-14 08:29:40,137 | INFO     | mean y: 2306497.0865384615
[2026-03-14 09:30:19] 2026-03-14 08:29:40,137 | INFO     | intersect: -56717574807.18657
[2026-03-14 09:30:19] 2026-03-14 08:29:40,137 | INFO     | chi2: 1.11275041385193
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | sum of square deviations: 300842850.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | sum of deviations: 10550228465.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | mean x: 1773473652.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | mean y: 2304572.9292929294
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | intersect: -62191469370.03762
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | chi2: 1.1144691546604304
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | current chi2=1.1144691546604304 (change=-0.15445878852120892 %)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | right removable region: 98
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | sum of square deviations: 300842850.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | sum of deviations: 1029339376.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | mean x: 1773473957.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,138 | INFO     | mean y: 2337739.232323232
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | intersect: -6065636208.796126
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | chi2: 0.0003830828837114272
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | current chi2=0.0003830828837114272 (change=99.96557333262314 %)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | sum of square deviations: 257521107.5
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | sum of deviations: 693028167.5
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | mean x: 1773474109.5
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | mean y: 2338914.223404255
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | intersect: -4770347581.835873
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | chi2: 0.00017053589063361553
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | current chi2=0.00017053589063361553 (change=55.483291505637034 %)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | sum of square deviations: 218571540.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,139 | INFO     | sum of deviations: 517182582.99999994
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | mean x: 1773474262.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | mean y: 2339604.7528089886
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | intersect: -4194043875.4806128
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | chi2: 0.000141005079389957
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | current chi2=0.000141005079389957 (change=17.31647873883828 %)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | left removable region: 30
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | sum of square deviations: 97479037.0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | sum of deviations: 147468689.50000003
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | mean x: 1773474536.5
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | mean y: 2340916.3970588236
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | intersect: -2680615068.8910904
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | chi2: 3.5377614415774115e-05
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | current memory leak: 1.51 B/s (using 68 data points, chi2=0.00)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,140 | INFO     | could have reported an average CPU frequency of 3572 MHz (7 samples)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | ..............................
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . Timing measurements:
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . get job = 0 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . initial setup = 5 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . payload setup = 4 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . stage-in = 0 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . payload execution = 6312 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . stage-out = 0 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | . log creation = 0 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,141 | INFO     | ..............................
[2026-03-14 09:30:19] 2026-03-14 08:29:40,379 | INFO     | 
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | job summary report
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | --------------------------------------------------
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | PanDA job id: 7050439184
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | task id: 48967094
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | errors: (none)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | pilot state: finished 
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | transexitcode: 0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | exeerrorcode: 0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | exeerrordiag: 
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | exitcode: 0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,383 | INFO     | exitmsg: OK
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | cpuconsumptiontime: 24248 s
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | nevents: 400
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | neventsw: 0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | pid: 3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | pgrp: 3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | corecount: 4
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | event service: False
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | sizes: {0: 2280236, 11: 2280236, 6320: 2307136, 6321: 2316158, 6324: 2316214, 6326: 2316408}
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | --------------------------------------------------
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | 
[2026-03-14 09:30:19] 2026-03-14 08:29:40,384 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/0
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | job 7050439184 has completed (purged errors)
[2026-03-14 09:30:19] 2026-03-14 08:29:40,407 | INFO     | overall cleanup function is called
[2026-03-14 09:30:19] 2026-03-14 08:29:40,786 | WARNING  | process 3195134 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 09:30:19] 2026-03-14 08:29:41,134 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 09:30:19] 2026-03-14 08:29:41,135 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 09:30:19] 2026-03-14 08:29:41,135 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 09:30:19] 2026-03-14 08:29:41,135 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 09:30:19] 2026-03-14 08:29:41,135 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7050439184/payload.stdout) since it has not been created yet
[2026-03-14 09:30:19] 2026-03-14 08:29:41,135 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-14 09:30:19] 2026-03-14 08:29:41,151 | INFO     | sufficient remaining disk space (20459814912 B)
[2026-03-14 09:30:19] 2026-03-14 08:29:41,151 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 09:30:19] 2026-03-14 08:29:41,151 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7050439184/HITS.48967094._005362.pool.root.1 since it does not exist
[2026-03-14 09:30:19] 2026-03-14 08:29:41,415 | INFO     | --- collectZombieJob: --- 10, [3195134]
[2026-03-14 09:30:19] 2026-03-14 08:29:41,416 | INFO     | zombie collector waiting for pid 3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:41,416 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 09:30:19] 2026-03-14 08:29:41,416 | INFO     | collected zombie processes
[2026-03-14 09:30:19] 2026-03-14 08:29:41,416 | INFO     | will attempt to kill all subprocesses of pid=3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:42,125 | INFO     | number of running child processes to parent process 3195134: 1
[2026-03-14 09:30:19] 2026-03-14 08:29:42,126 | INFO     | maximum number of monitored processes: 6
[2026-03-14 09:30:19] 2026-03-14 08:29:42,126 | INFO     | aborting job monitoring since job object (job id=7050439184) has expired
[2026-03-14 09:30:19] 2026-03-14 08:29:42,329 | INFO     | process IDs to be killed: [3195134] (in reverse order)
[2026-03-14 09:30:19] 2026-03-14 08:29:42,590 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 09:30:19] 2026-03-14 08:29:42,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 09:30:19] 2026-03-14 08:29:42,621 | INFO     | did not find any defunct processes belonging to 3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:42,652 | INFO     | did not find any defunct processes belonging to 3195134
[2026-03-14 09:30:19] 2026-03-14 08:29:42,652 | INFO     | ready for new job
[2026-03-14 09:30:19] 2026-03-14 08:29:42,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 09:30:19] 2026-03-14 08:29:42,654 | INFO     | **************************************
[2026-03-14 09:30:19] 2026-03-14 08:29:42,654 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 09:30:19] 2026-03-14 08:29:42,654 | INFO     | **************************************
[2026-03-14 09:30:19] 2026-03-14 08:29:42,654 | INFO     | 
[2026-03-14 09:30:19] 2026-03-14 08:29:42,660 | INFO     | architecture information:
[2026-03-14 09:30:19] 2026-03-14 08:29:42,660 | INFO     | executing command: cat /etc/os-release
[2026-03-14 09:30:19] 2026-03-14 08:29:42,674 | INFO     | cat /etc/os-release:
[2026-03-14 09:30:19] NAME="CentOS Linux"
[2026-03-14 09:30:19] VERSION="7 (Core)"
[2026-03-14 09:30:19] ID="centos"
[2026-03-14 09:30:19] ID_LIKE="rhel fedora"
[2026-03-14 09:30:19] VERSION_ID="7"
[2026-03-14 09:30:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 09:30:19] ANSI_COLOR="0;31"
[2026-03-14 09:30:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 09:30:19] HOME_URL="https://www.centos.org/"
[2026-03-14 09:30:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 09:30:19] 
[2026-03-14 09:30:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 09:30:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 09:30:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 09:30:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 09:30:19] 
[2026-03-14 09:30:19] 2026-03-14 08:29:42,674 | INFO     | **************************************
[2026-03-14 09:30:19] 2026-03-14 08:29:43,177 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | INFO     | sufficient remaining disk space (20458766336 B)
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | INFO     | update_server=False
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 09:30:19] 2026-03-14 08:29:43,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:30:19] 2026-03-14 08:29:43,194 | INFO     | aborting loop
[2026-03-14 09:30:19] 2026-03-14 08:29:43,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 09:30:19] 2026-03-14 08:29:43,817 | INFO     | all data control threads have been joined
[2026-03-14 09:30:19] 2026-03-14 08:29:44,199 | INFO     | [job] retrieve thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,199 | INFO     | [job] job monitor thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,275 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,362 | INFO     | all payload control threads have been joined
[2026-03-14 09:30:19] 2026-03-14 08:29:44,371 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,461 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,462 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 09:30:19] 2026-03-14 08:29:44,772 | INFO     | [job] validate thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,818 | INFO     | all job control threads have been joined
[2026-03-14 09:30:19] 2026-03-14 08:29:44,823 | INFO     | [data] control thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:44,928 | INFO     | [payload] validate_post thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:45,117 | INFO     | [data] copytool_in thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:45,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:30:19] 2026-03-14 08:29:45,367 | INFO     | [payload] control thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:45,376 | INFO     | [payload] failed_post thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:45,643 | INFO     | [data] copytool_out thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:45,823 | INFO     | [job] control thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:46,205 | INFO     | [job] queue monitor thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:29:48,569 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 09:30:19] 2026-03-14 08:30:12,297 | INFO     | PID=3189278 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 09:30:19] 2026-03-14 08:30:12,297 | INFO     | .. there are 47 such processes running
[2026-03-14 09:30:19] 2026-03-14 08:30:12,297 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 09:30:19] 2026-03-14 08:30:12,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 09:30:19] 2026-03-14 08:30:12,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 09:30:19] 2026-03-14 08:30:13,230 | INFO     | [monitor] cgroup control has ended
[2026-03-14 09:30:19] 2026-03-14 08:30:13,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22417462003520)>', '<ExcThread(monitor, started 22417216108288)>']
[2026-03-14 09:30:19] 2026-03-14 08:30:14,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 09:30:19] 2026-03-14 08:30:14,308 | INFO     | [monitor] control thread has ended
[2026-03-14 09:30:19] 2026-03-14 08:30:18,809 | INFO     | all workflow threads have been joined
[2026-03-14 09:30:19] 2026-03-14 08:30:18,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 09:30:19] 2026-03-14 08:30:18,809 | INFO     | traces error code: 0
[2026-03-14 09:30:19] 2026-03-14 08:30:18,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 09:30:19] 2026-03-14 08:30:19,074 [wrapper] ==== pilot stdout END ====
[2026-03-14 09:30:19] 2026-03-14 08:30:19,077 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 09:30:19] 2026-03-14 08:30:19,079 [wrapper] pilotpid: 3189278
[2026-03-14 09:30:19] 2026-03-14 08:30:19,081 [wrapper] Pilot exit status: 0
[2026-03-14 09:30:19] 2026-03-14 08:30:19,090 [wrapper] pandaids: 7050439184
[2026-03-14 09:30:19] 2026-03-14 08:30:19,233 [wrapper] cleanup supervisor_pilot 4036787 3189279
[2026-03-14 09:30:19] 2026-03-14 08:30:19,236 [wrapper] Test setup, not cleaning
[2026-03-14 09:30:19] 2026-03-14 08:30:19,237 [wrapper] apfmon messages muted
[2026-03-14 09:30:19] 2026-03-14 08:30:19,238 [wrapper] ==== wrapper stdout END ====
[2026-03-14 09:30:19] 2026-03-14 08:30:19,240 [wrapper] ==== wrapper stderr END ====
[2026-03-14 09:30:19]  *** Error codes and diagnostics ***
[2026-03-14 09:30:19]     "exeErrorCode": 0,
[2026-03-14 09:30:19]     "exeErrorDiag": "",
[2026-03-14 09:30:19]     "pilotErrorCode": 0,
[2026-03-14 09:30:19]     "pilotErrorDiag": "",
[2026-03-14 09:30:19]  *** Listing of results directory ***
[2026-03-14 09:30:19] total 422208
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc    585013 Mar 12 00:24 pilot3.tar.gz
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc      5111 Mar 12 01:05 queuedata.json
[2026-03-14 09:30:19] -rwx------. 1 boinc boinc     36322 Mar 12 01:05 runpilot2-wrapper.sh
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc       100 Mar 14 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 09:30:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 07:43 run_atlas
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc       105 Mar 14 07:43 job.xml
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc      6709 Mar 14 07:43 init_data.xml
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc 218165897 Mar 14 07:43 EVNT.48967092._000226.pool.root.1
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc     15845 Mar 14 07:43 start_atlas.sh
[2026-03-14 09:30:19] drwxrwx--x. 2 boinc boinc      4096 Mar 14 07:43 shared
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc    597531 Mar 14 07:43 input.tar.gz
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc         0 Mar 14 07:43 boinc_lockfile
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc      2597 Mar 14 07:43 pandaJob.out
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc   1004579 Mar 14 07:43 agis_schedconf.cvmfs.json
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc   1511579 Mar 14 07:43 agis_ddmendpoints.agis.ALL.json
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc       445 Mar 14 07:44 workernode_map.json
[2026-03-14 09:30:19] drwx------. 5 boinc boinc      4096 Mar 14 07:44 pilot3
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc 207835564 Mar 14 09:29 HITS.48967094._005362.pool.root.1
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc        95 Mar 14 09:29 pilot_heartbeat.json
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc       530 Mar 14 09:29 boinc_task_state.xml
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc      1030 Mar 14 09:29 memory_monitor_summary.json
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc    285909 Mar 14 09:29 log.48967094._005362.job.log.tgz.1
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc      6352 Mar 14 09:29 heartbeat.json
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc      8192 Mar 14 09:29 boinc_mmap_file
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc        27 Mar 14 09:29 wrapper_checkpoint.txt
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc      4830 Mar 14 09:30 pilotlog.txt
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc    911593 Mar 14 09:30 log.48967094._005362.job.log.1
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc       357 Mar 14 09:30 output.list
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc       620 Mar 14 09:30 runtime_log
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc   1218560 Mar 14 09:30 result.tar.gz
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc       664 Mar 14 09:30 wOQLDmxjiK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtciLDm7Cghpm.diag
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc      9221 Mar 14 09:30 runtime_log.err
[2026-03-14 09:30:19] -rw-r--r--. 1 boinc boinc     21264 Mar 14 09:30 stderr.txt
[2026-03-14 09:30:19] HITS file was successfully produced:
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc 207835564 Mar 14 09:29 shared/HITS.pool.root.1
[2026-03-14 09:30:19]  *** Contents of shared directory: ***
[2026-03-14 09:30:19] total 417824
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc 218165897 Mar 14 07:43 ATLAS.root_0
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc     15845 Mar 14 07:43 start_atlas.sh
[2026-03-14 09:30:19] -rw-r--r--. 2 boinc boinc    597531 Mar 14 07:43 input.tar.gz
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc 207835564 Mar 14 09:29 HITS.pool.root.1
[2026-03-14 09:30:19] -rw-------. 1 boinc boinc   1218560 Mar 14 09:30 result.tar.gz
09:30:20 (3184699): run_atlas exited; CPU time 24560.656941
09:30:20 (3184699): called boinc_finish(0)

</stderr_txt>
]]>

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