Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:24 (3337498): wrapper (7.7.26015): starting
19:59:24 (3337498): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 19:59:24] Arguments: --nthreads 3
[2026-03-12 19:59:24] Threads: 3
[2026-03-12 19:59:24] Checking for CVMFS
[2026-03-12 19:59:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 19:59:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 19:59:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 19:59:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 19:59:24] 2.9.2.0 85582 21796 90832 157211 0 50 24740158 36864001 0 130560 0 8610012 99.982 820886 12878 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 19:59:24] CVMFS is ok
[2026-03-12 19:59:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 19:59:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 19:59:24] Further information can be found at the LHC@home message board.
[2026-03-12 19:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 19:59:24] Checking for apptainer binary...
[2026-03-12 19:59:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 19:59:24] Running /usr/bin/apptainer --version
[2026-03-12 19:59:24] apptainer version 1.4.1-1.1
[2026-03-12 19:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 19:59:24] thA305
[2026-03-12 19:59:24] apptainer works
[2026-03-12 19:59:24] Set ATHENA_PROC_NUMBER=3
[2026-03-12 19:59:24] Set ATHENA_CORE_NUMBER=3
[2026-03-12 19:59:24] Starting ATLAS job with PandaID=7036962432
[2026-03-12 19:59:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:35:04]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:35:04] ID_LIKE="rhel fedora"
[2026-03-12 21:35:04] VERSION_ID="7"
[2026-03-12 21:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:35:04] ANSI_COLOR="0;31"
[2026-03-12 21:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:35:04] HOME_URL="https://www.centos.org/"
[2026-03-12 21:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:35:04] 
[2026-03-12 21:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:35:04] 
[2026-03-12 21:35:04] 2026-03-12 20:34:33,877 | INFO     | **************************************
[2026-03-12 21:35:04] 2026-03-12 20:34:34,380 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | INFO     | sufficient remaining disk space (234171138048 B)
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | INFO     | update_server=False
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:35:04] 2026-03-12 20:34:34,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:35:04] 2026-03-12 20:34:34,430 | INFO     | all payload control threads have been joined
[2026-03-12 21:35:04] 2026-03-12 20:34:34,540 | INFO     | all job control threads have been joined
[2026-03-12 21:35:04] 2026-03-12 20:34:34,757 | WARNING  | process 3345962 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 21:35:04] 2026-03-12 20:34:34,791 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:35:04] 2026-03-12 20:34:34,833 | INFO     | number of running child processes to parent process 3345962: 1
[2026-03-12 21:35:04] 2026-03-12 20:34:34,833 | INFO     | maximum number of monitored processes: 6
[2026-03-12 21:35:04] 2026-03-12 20:34:34,833 | INFO     | aborting job monitoring since job object (job id=7036962432) has expired
[2026-03-12 21:35:04] 2026-03-12 20:34:34,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:35:04] 2026-03-12 20:34:34,833 | INFO     | will abort loop
[2026-03-12 21:35:04] 2026-03-12 20:34:34,835 | INFO     | all data control threads have been joined
[2026-03-12 21:35:04] 2026-03-12 20:34:35,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:35:04] 2026-03-12 20:34:35,400 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,400 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,435 | INFO     | [payload] control thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,546 | INFO     | [job] control thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,624 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,644 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,837 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:35,837 | INFO     | [data] control thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:36,176 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:36,483 | INFO     | [job] validate thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:36,529 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:36,534 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:36,668 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:37,278 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:38,401 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:40,729 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:35:04] 2026-03-12 20:34:44,682 | INFO     | job.realtimelogging is not enabled
[2026-03-12 21:35:04] 2026-03-12 20:34:45,688 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:35:04] 2026-03-12 20:34:46,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551564916544)>', '<ExcThread(monitor, started 140551219291904)>']
[2026-03-12 21:35:04] 2026-03-12 20:34:51,991 | INFO     | all workflow threads have been joined
[2026-03-12 21:35:04] 2026-03-12 20:34:51,992 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:35:04] 2026-03-12 20:34:51,992 | INFO     | traces error code: 0
[2026-03-12 21:35:04] 2026-03-12 20:34:51,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | INFO     | PID=3341539 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:35:04] 2026-03-12 20:35:04,777 | CRITICAL | thread 'MainThread' is not alive
[2026-03-12 21:35:04] 2026-03-12 20:35:04,778 | INFO     | [monitor] control thread has ended
[2026-03-12 21:35:04] 2026-03-12 20:35:04,823 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:35:04] 2026-03-12 20:35:04,825 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:35:04] 2026-03-12 20:35:04,828 [wrapper] pilotpid: 3341539
[2026-03-12 21:35:04] 2026-03-12 20:35:04,830 [wrapper] Pilot exit status: 0
[2026-03-12 21:35:04] 2026-03-12 20:35:04,837 [wrapper] pandaids: 7036962432
[2026-03-12 21:35:04] 2026-03-12 20:35:04,854 [wrapper] cleanup supervisor_pilot 3351931 3341540
[2026-03-12 21:35:04] 2026-03-12 20:35:04,856 [wrapper] Test setup, not cleaning
[2026-03-12 21:35:04] 2026-03-12 20:35:04,858 [wrapper] apfmon messages muted
[2026-03-12 21:35:04] 2026-03-12 20:35:04,861 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:35:04] 2026-03-12 20:35:04,863 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:35:04]  *** Error codes and diagnostics ***
[2026-03-12 21:35:04]     "exeErrorCode": 0,
[2026-03-12 21:35:04]     "exeErrorDiag": "",
[2026-03-12 21:35:04]     "pilotErrorCode": 0,
[2026-03-12 21:35:04]     "pilotErrorDiag": "",
[2026-03-12 21:35:04]  *** Listing of results directory ***
[2026-03-12 21:35:04] total 496044
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:08 pilot3.tar.gz
[2026-03-12 21:35:04] -rwx------ 1 boinc boinc     36322 Mar  4 02:10 runpilot2-wrapper.sh
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:13 queuedata.json
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc       100 Mar 12 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:35:04] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 19:59 run_atlas
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc       105 Mar 12 19:59 job.xml
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc 284465709 Mar 12 19:59 EVNT.48343768._000150.pool.root.1
[2026-03-12 21:35:04] drwxrwx--x 2 boinc boinc      4096 Mar 12 19:59 shared
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc    597956 Mar 12 19:59 input.tar.gz
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc     15845 Mar 12 19:59 start_atlas.sh
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc         0 Mar 12 19:59 boinc_setup_complete
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      6439 Mar 12 19:59 init_data.xml
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc         0 Mar 12 19:59 boinc_lockfile
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      2564 Mar 12 19:59 pandaJob.out
[2026-03-12 21:35:04] -rw------- 1 boinc boinc   1006522 Mar 12 19:59 agis_schedconf.cvmfs.json
[2026-03-12 21:35:04] -rw------- 1 boinc boinc   1511578 Mar 12 19:59 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:35:04] -rw------- 1 boinc boinc       417 Mar 12 19:59 workernode_map.json
[2026-03-12 21:35:04] drwx------ 5 boinc boinc      4096 Mar 12 19:59 pilot3
[2026-03-12 21:35:04] -rw------- 1 boinc boinc 217364396 Mar 12 21:34 HITS.48838605._003868.pool.root.1
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc       529 Mar 12 21:34 boinc_task_state.xml
[2026-03-12 21:35:04] -rw------- 1 boinc boinc      1018 Mar 12 21:34 memory_monitor_summary.json
[2026-03-12 21:35:04] -rw------- 1 boinc boinc    269349 Mar 12 21:34 log.48838605._003868.job.log.tgz.1
[2026-03-12 21:35:04] -rw------- 1 boinc boinc      6293 Mar 12 21:34 heartbeat.json
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc        27 Mar 12 21:35 wrapper_checkpoint.txt
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      8192 Mar 12 21:35 boinc_mmap_file
[2026-03-12 21:35:04] -rw------- 1 boinc boinc       817 Mar 12 21:35 pilotlog.txt
[2026-03-12 21:35:04] -rw------- 1 boinc boinc        95 Mar 12 21:35 pilot_heartbeat.json
[2026-03-12 21:35:04] -rw------- 1 boinc boinc    828699 Mar 12 21:35 log.48838605._003868.job.log.1
[2026-03-12 21:35:04] -rw------- 1 boinc boinc       357 Mar 12 21:35 output.list
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc       620 Mar 12 21:35 runtime_log
[2026-03-12 21:35:04] -rw------- 1 boinc boinc   1116160 Mar 12 21:35 result.tar.gz
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      8896 Mar 12 21:35 runtime_log.err
[2026-03-12 21:35:04] -rw------- 1 boinc boinc       657 Mar 12 21:35 0T8NDmCwpH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJoGLDmNjs99n.diag
[2026-03-12 21:35:04] -rw-r--r-- 1 boinc boinc      9409 Mar 12 21:35 stderr.txt
[2026-03-12 21:35:04] HITS file was successfully produced:
[2026-03-12 21:35:04] -rw------- 1 boinc boinc 217364396 Mar 12 21:34 shared/HITS.pool.root.1
[2026-03-12 21:35:04]  *** Contents of shared directory: ***
[2026-03-12 21:35:04] total 491772
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc 284465709 Mar 12 19:59 ATLAS.root_0
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc    597956 Mar 12 19:59 input.tar.gz
[2026-03-12 21:35:04] -rw-r--r-- 2 boinc boinc     15845 Mar 12 19:59 start_atlas.sh
[2026-03-12 21:35:04] -rw------- 1 boinc boinc 217364396 Mar 12 21:34 HITS.pool.root.1
[2026-03-12 21:35:04] -rw------- 1 boinc boinc   1116160 Mar 12 21:35 result.tar.gz
21:35:06 (3337498): run_atlas exited; CPU time 16415.880324
21:35:06 (3337498): called boinc_finish(0)

</stderr_txt>
]]>

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