Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:32:38 (1169235): wrapper (7.7.26015): starting
14:32:38 (1169235): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 14:32:38] Arguments: --nthreads 4
[2026-03-12 14:32:38] Threads: 4
[2026-03-12 14:32:38] Checking for CVMFS
[2026-03-12 14:32:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:32:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:32:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:32:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:32:40] 2.13.3.0 3295 9630 59580 157215 3 50 3696248 6144001 2769 130560 0 16420600 99.996 369910 1203 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 14:32:40] CVMFS is ok
[2026-03-12 14:32:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 14:32:40] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 14:32:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 14:32:40] Further information can be found at the LHC@home message board.
[2026-03-12 14:32:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:32:40] Checking for apptainer binary...
[2026-03-12 14:32:40] apptainer is not installed, using version from CVMFS
[2026-03-12 14:32:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:32:40] ubuntu-vm
[2026-03-12 14:32:40] apptainer works
[2026-03-12 14:32:40] Set ATHENA_PROC_NUMBER=4
[2026-03-12 14:32:40] Set ATHENA_CORE_NUMBER=4
[2026-03-12 14:32:40] Starting ATLAS job with PandaID=7036972208
[2026-03-12 14:32:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/boinc/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 16:05:16]  *** The last 200 lines of the pilot log: ***
[2026-03-12 16:05:16]  guid=20942790-0a5e-4a69-895c-29d52b657db9
[2026-03-12 16:05:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 16:05:16]  is_altstaged=None
[2026-03-12 16:05:16]  is_tar=False
[2026-03-12 16:05:16]  lfn=log.48838605._004245.job.log.tgz.1
[2026-03-12 16:05:16]  mtime=0
[2026-03-12 16:05:16]  protocol_id=None
[2026-03-12 16:05:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 16:05:16]  replicas=None
[2026-03-12 16:05:16]  scope=mc23_13p6TeV
[2026-03-12 16:05:16]  status=None
[2026-03-12 16:05:16]  status_code=0
[2026-03-12 16:05:16]  storage_token=
[2026-03-12 16:05:16]  surl=/mnt/boinc/boinc-client/slots/1/PanDA_Pilot-7036972208/log.48838605._004245.job.log.tgz.1
[2026-03-12 16:05:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/03/log.48838605._004245.job.log.tgz.1
[2026-03-12 16:05:16]  workdir=None
[2026-03-12 16:05:16] ]
[2026-03-12 16:05:16] 2026-03-12 23:04:43,131 | INFO     | transferring file log.48838605._004245.job.log.tgz.1 from /mnt/boinc/boinc-client/slots/1/PanDA_Pilot-7036972208/log.48838605._004245.job.log.tgz.1 to /mnt/boinc/b
[2026-03-12 16:05:16] 2026-03-12 23:04:43,131 | INFO     | executing command: /usr/bin/env mv /mnt/boinc/boinc-client/slots/1/PanDA_Pilot-7036972208/log.48838605._004245.job.log.tgz.1 /mnt/boinc/boinc-client/slots/1/log.48
[2026-03-12 16:05:16] 2026-03-12 23:04:43,143 | INFO     | adding to output.list: log.48838605._004245.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/03/log.48838605._004245.job.log.tg
[2026-03-12 16:05:16] 2026-03-12 23:04:43,143 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 16:05:16] 2026-03-12 23:04:43,143 | INFO     | summary of transferred files:
[2026-03-12 16:05:16] 2026-03-12 23:04:43,143 | INFO     |  -- lfn=log.48838605._004245.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 16:05:16] 2026-03-12 23:04:43,143 | INFO     | stage-out finished correctly
[2026-03-12 16:05:16] 2026-03-12 23:04:43,168 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 16:05:16] 2026-03-12 23:04:44,434 | INFO     | job 7036972208 has state=finished
[2026-03-12 16:05:16] 2026-03-12 23:04:44,435 | INFO     | preparing for final server update for job 7036972208 in state='finished'
[2026-03-12 16:05:16] 2026-03-12 23:04:44,435 | INFO     | reading metadata from: /mnt/boinc/boinc-client/slots/1/PanDA_Pilot-7036972208/jobReport.json
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | added worker_node to metadata from /mnt/boinc/boinc-client/slots/1/workernode_map.json
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | this job has now completed (state=finished)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | log transfer has been attempted: DONE
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | job 7036972208 has finished - writing final server update
[2026-03-12 16:05:16] 2026-03-12 23:04:44,436 | INFO     | total number of processed events: 400 (read)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,438 | INFO     | using path: /mnt/boinc/boinc-client/slots/1/PanDA_Pilot-7036972208/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,438 | INFO     | extracted standard info from prmon json
[2026-03-12 16:05:16] 2026-03-12 23:04:44,438 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 16:05:16] 2026-03-12 23:04:44,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 16:05:16] 2026-03-12 23:04:44,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 16:05:16] 2026-03-12 23:04:44,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 16:05:16] 2026-03-12 23:04:44,439 | INFO     | fitting pss+swap vs Time
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | sum of square deviations: 177275882.0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | sum of deviations: -20491984309.0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | mean x: 1773354002.0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | mean y: 2549668.1566265062
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | intersect: 204991192078.55713
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | chi2: 0.09567609635188765
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | current memory leak: -115.59 B/s (using 83 data points, chi2=0.10)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | could have reported an average CPU frequency of 4199 MHz (7 samples)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | ..............................
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . Timing measurements:
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . get job = 0 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . initial setup = 6 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . payload setup = 4 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . stage-in = 0 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . payload execution = 5485 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . stage-out = 0 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,440 | INFO     | . log creation = 0 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,441 | INFO     | ..............................
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | 
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | job summary report
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | --------------------------------------------------
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | PanDA job id: 7036972208
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | task id: 48838605
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | errors: (none)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | pilot state: finished 
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | transexitcode: 0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | exeerrorcode: 0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | exeerrordiag: 
[2026-03-12 16:05:16] 2026-03-12 23:04:44,483 | INFO     | exitcode: 0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | exitmsg: OK
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | cpuconsumptiontime: 21104 s
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | nevents: 400
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | neventsw: 0
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | pid: 1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | pgrp: 1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | corecount: 4
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | event service: False
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | sizes: {0: 2279990, 1: 2280196, 11: 2280224, 5493: 2306930, 5494: 2316001, 5496: 2316139}
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | --------------------------------------------------
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | 
[2026-03-12 16:05:16] 2026-03-12 23:04:44,484 | INFO     | executing command: ls -lF /mnt/boinc/boinc-client/slots/1
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | job 7036972208 has completed (purged errors)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,502 | INFO     | overall cleanup function is called
[2026-03-12 16:05:16] 2026-03-12 23:04:44,537 | WARNING  | process 1177829 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 16:05:16] 2026-03-12 23:04:44,574 | INFO     | using path: /mnt/boinc/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 16:05:16] 2026-03-12 23:04:44,665 | INFO     | number of running child processes to parent process 1177829: 1
[2026-03-12 16:05:16] 2026-03-12 23:04:44,665 | INFO     | maximum number of monitored processes: 6
[2026-03-12 16:05:16] 2026-03-12 23:04:44,666 | INFO     | aborting job monitoring since job object (job id=7036972208) has expired
[2026-03-12 16:05:16] 2026-03-12 23:04:45,510 | INFO     | --- collectZombieJob: --- 10, [1177829]
[2026-03-12 16:05:16] 2026-03-12 23:04:45,510 | INFO     | zombie collector waiting for pid 1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:45,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 16:05:16] 2026-03-12 23:04:45,510 | INFO     | collected zombie processes
[2026-03-12 16:05:16] 2026-03-12 23:04:45,510 | INFO     | will attempt to kill all subprocesses of pid=1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:45,557 | INFO     | process IDs to be killed: [1177829] (in reverse order)
[2026-03-12 16:05:16] 2026-03-12 23:04:45,593 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 16:05:16] 2026-03-12 23:04:45,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 16:05:16] 2026-03-12 23:04:45,595 | INFO     | did not find any defunct processes belonging to 1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:45,597 | INFO     | did not find any defunct processes belonging to 1177829
[2026-03-12 16:05:16] 2026-03-12 23:04:45,597 | INFO     | ready for new job
[2026-03-12 16:05:16] 2026-03-12 23:04:45,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | **************************************
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | **************************************
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | 
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | pilot is running in a VM
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | architecture information:
[2026-03-12 16:05:16] 2026-03-12 23:04:45,598 | INFO     | executing command: cat /etc/os-release
[2026-03-12 16:05:16] 2026-03-12 23:04:45,615 | INFO     | cat /etc/os-release:
[2026-03-12 16:05:16] NAME="CentOS Linux"
[2026-03-12 16:05:16] VERSION="7 (Core)"
[2026-03-12 16:05:16] ID="centos"
[2026-03-12 16:05:16] ID_LIKE="rhel fedora"
[2026-03-12 16:05:16] VERSION_ID="7"
[2026-03-12 16:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 16:05:16] ANSI_COLOR="0;31"
[2026-03-12 16:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 16:05:16] HOME_URL="https://www.centos.org/"
[2026-03-12 16:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 16:05:16] 
[2026-03-12 16:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 16:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 16:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 16:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 16:05:16] 
[2026-03-12 16:05:16] 2026-03-12 23:04:45,616 | INFO     | **************************************
[2026-03-12 16:05:16] 2026-03-12 23:04:46,118 | INFO     | executing command: df -mP /mnt/boinc/boinc-client/slots/1
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | INFO     | sufficient remaining disk space (54716792832 B)
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | INFO     | update_server=False
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | INFO     | aborting loop
[2026-03-12 16:05:16] 2026-03-12 23:04:46,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 16:05:16] 2026-03-12 23:04:46,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 16:05:16] 2026-03-12 23:04:46,836 | INFO     | all data control threads have been joined
[2026-03-12 16:05:16] 2026-03-12 23:04:47,137 | INFO     | [job] retrieve thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,138 | INFO     | [job] job monitor thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,138 | INFO     | [job] queue monitor thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,409 | INFO     | all job control threads have been joined
[2026-03-12 16:05:16] 2026-03-12 23:04:47,410 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,631 | INFO     | all payload control threads have been joined
[2026-03-12 16:05:16] 2026-03-12 23:04:47,668 | INFO     | [data] copytool_in thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,842 | INFO     | [data] control thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:47,935 | INFO     | [payload] failed_post thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,184 | INFO     | [data] copytool_out thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,326 | INFO     | [payload] validate_post thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,414 | INFO     | [job] control thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,490 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,534 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,612 | INFO     | [job] validate thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,629 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:48,636 | INFO     | [payload] control thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:04:49,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 16:05:16] 2026-03-12 23:04:53,216 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 16:05:16] 2026-03-12 23:05:06,623 | INFO     | [monitor] cgroup control has ended
[2026-03-12 16:05:16] 2026-03-12 23:05:07,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134990561576768)>', '<ExcThread(monitor, started 134989211498240)>']
[2026-03-12 16:05:16] 2026-03-12 23:05:12,628 | INFO     | all workflow threads have been joined
[2026-03-12 16:05:16] 2026-03-12 23:05:12,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 16:05:16] 2026-03-12 23:05:12,629 | INFO     | traces error code: 0
[2026-03-12 16:05:16] 2026-03-12 23:05:12,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 16:05:16] 2026-03-12 23:05:16,360 | INFO     | PID=1173343 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 16:05:16] 2026-03-12 23:05:16,360 | INFO     | .. there are 4 such processes running
[2026-03-12 16:05:16] 2026-03-12 23:05:16,361 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 16:05:16] 2026-03-12 23:05:16,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 16:05:16] 2026-03-12 23:05:16,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 16:05:16] 2026-03-12 23:05:16,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 16:05:16] 2026-03-12 23:05:16,361 | INFO     | [monitor] control thread has ended
[2026-03-12 16:05:16] 2026-03-12 23:05:16,420 [wrapper] ==== pilot stdout END ====
[2026-03-12 16:05:16] 2026-03-12 23:05:16,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 16:05:16] 2026-03-12 23:05:16,424 [wrapper] pilotpid: 1173343
[2026-03-12 16:05:16] 2026-03-12 23:05:16,426 [wrapper] Pilot exit status: 0
[2026-03-12 16:05:16] 2026-03-12 23:05:16,433 [wrapper] pandaids: 7036972208
[2026-03-12 16:05:16] 2026-03-12 23:05:16,452 [wrapper] cleanup supervisor_pilot 1222697 1173344
[2026-03-12 16:05:16] 2026-03-12 23:05:16,453 [wrapper] Test setup, not cleaning
[2026-03-12 16:05:16] 2026-03-12 23:05:16,456 [wrapper] apfmon messages muted
[2026-03-12 16:05:16] 2026-03-12 23:05:16,457 [wrapper] ==== wrapper stdout END ====
[2026-03-12 16:05:16] 2026-03-12 23:05:16,459 [wrapper] ==== wrapper stderr END ====
[2026-03-12 16:05:16]  *** Error codes and diagnostics ***
[2026-03-12 16:05:16]     "exeErrorCode": 0,
[2026-03-12 16:05:16]     "exeErrorDiag": "",
[2026-03-12 16:05:16]     "pilotErrorCode": 0,
[2026-03-12 16:05:16]     "pilotErrorDiag": "",
[2026-03-12 16:05:16]  *** Listing of results directory ***
[2026-03-12 16:05:16] total 491620
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:08 pilot3.tar.gz
[2026-03-12 16:05:16] -rwx------ 1 boinc boinc     36322 Mar  3 17:10 runpilot2-wrapper.sh
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:12 queuedata.json
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc       100 Mar 12 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 16:05:16] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 14:32 run_atlas
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc       105 Mar 12 14:32 job.xml
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc 285355288 Mar 12 14:32 EVNT.48343768._000170.pool.root.1
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc    597957 Mar 12 14:32 input.tar.gz
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc     15845 Mar 12 14:32 start_atlas.sh
[2026-03-12 16:05:16] drwxrwx--x 2 boinc boinc      4096 Mar 12 14:32 shared
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc         0 Mar 12 14:32 boinc_setup_complete
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc      6870 Mar 12 14:32 init_data.xml
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc         0 Mar 12 14:32 boinc_lockfile
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc      2564 Mar 12 14:32 pandaJob.out
[2026-03-12 16:05:16] -rw------- 1 boinc boinc   1006514 Mar 12 14:32 agis_schedconf.cvmfs.json
[2026-03-12 16:05:16] -rw------- 1 boinc boinc   1511578 Mar 12 14:32 agis_ddmendpoints.agis.ALL.json
[2026-03-12 16:05:16] -rw------- 1 boinc boinc       424 Mar 12 14:32 workernode_map.json
[2026-03-12 16:05:16] drwx------ 5 boinc boinc      4096 Mar 12 14:32 pilot3
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc       529 Mar 12 16:04 boinc_task_state.xml
[2026-03-12 16:05:16] -rw------- 1 boinc boinc 211923181 Mar 12 16:04 HITS.48838605._004245.pool.root.1
[2026-03-12 16:05:16] -rw------- 1 boinc boinc      1023 Mar 12 16:04 memory_monitor_summary.json
[2026-03-12 16:05:16] -rw------- 1 boinc boinc    285476 Mar 12 16:04 log.48838605._004245.job.log.tgz.1
[2026-03-12 16:05:16] -rw------- 1 boinc boinc      6299 Mar 12 16:04 heartbeat.json
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc      8192 Mar 12 16:04 boinc_mmap_file
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc        27 Mar 12 16:04 wrapper_checkpoint.txt
[2026-03-12 16:05:16] -rw------- 1 boinc boinc       822 Mar 12 16:05 pilotlog.txt
[2026-03-12 16:05:16] -rw------- 1 boinc boinc        95 Mar 12 16:05 pilot_heartbeat.json
[2026-03-12 16:05:16] -rw------- 1 boinc boinc    819801 Mar 12 16:05 log.48838605._004245.job.log.1
[2026-03-12 16:05:16] -rw------- 1 boinc boinc       357 Mar 12 16:05 output.list
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc       620 Mar 12 16:05 runtime_log
[2026-03-12 16:05:16] -rw------- 1 boinc boinc   1126400 Mar 12 16:05 result.tar.gz
[2026-03-12 16:05:16] -rw------- 1 boinc boinc       652 Mar 12 16:05 tdfNDmEwpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjjILDmNeBRum.diag
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc      8954 Mar 12 16:05 runtime_log.err
[2026-03-12 16:05:16] -rw-r--r-- 1 boinc boinc     21496 Mar 12 16:05 stderr.txt
[2026-03-12 16:05:16] HITS file was successfully produced:
[2026-03-12 16:05:16] -rw------- 1 boinc boinc 211923181 Mar 12 16:04 shared/HITS.pool.root.1
[2026-03-12 16:05:16]  *** Contents of shared directory: ***
[2026-03-12 16:05:16] total 487328
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc 285355288 Mar 12 14:32 ATLAS.root_0
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc    597957 Mar 12 14:32 input.tar.gz
[2026-03-12 16:05:16] -rw-r--r-- 2 boinc boinc     15845 Mar 12 14:32 start_atlas.sh
[2026-03-12 16:05:16] -rw------- 1 boinc boinc 211923181 Mar 12 16:04 HITS.pool.root.1
[2026-03-12 16:05:16] -rw------- 1 boinc boinc   1126400 Mar 12 16:05 result.tar.gz
16:05:17 (1169235): run_atlas exited; CPU time 21078.412414
16:05:17 (1169235): called boinc_finish(0)

</stderr_txt>
]]>

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