Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:05:58 (1382402): wrapper (7.7.26015): starting
07:05:58 (1382402): wrapper: running run_atlas (--nthreads 9)
[2026-03-12 07:05:58] Arguments: --nthreads 9
[2026-03-12 07:05:58] Threads: 9
[2026-03-12 07:05:58] Checking for CVMFS
[2026-03-12 07:05:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 07:05:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 07:05:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 07:06:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 07:06:01] 2.13.3.0 12257 182558 786248 157197 3 666 18137828 32935937 53775 16776704 0 1099453907 99.708 797719463 22217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 07:06:01] CVMFS is ok
[2026-03-12 07:06:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 07:06:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 07:06:01] Further information can be found at the LHC@home message board.
[2026-03-12 07:06:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 07:06:01] Checking for apptainer binary...
[2026-03-12 07:06:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 07:06:01] Running /usr/bin/apptainer --version
[2026-03-12 07:06:01] apptainer version 1.4.5-2.el9
[2026-03-12 07:06:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 07:06:02] c-1-3.aglt2.org
[2026-03-12 07:06:02] apptainer works
[2026-03-12 07:06:03] Set ATHENA_PROC_NUMBER=9
[2026-03-12 07:06:03] Set ATHENA_CORE_NUMBER=9
[2026-03-12 07:06:03] Starting ATLAS job with PandaID=7036972314
[2026-03-12 07:06:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:27:13 (2028409): wrapper (7.7.26015): starting
09:27:13 (2028409): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 09:27:13] Arguments: --nthreads 8
[2026-03-12 09:27:13] Threads: 8
[2026-03-12 09:27:13] This job has been restarted, cleaning up previous attempt
[2026-03-12 09:27:13] Checking for CVMFS
[2026-03-12 09:27:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 09:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 09:27:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 09:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 09:27:17] 2.13.3.0 12257 182699 763344 157202 2 230 19521331 32935937 50329 16776704 0 1101033437 99.708 798081413 22219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 09:27:17] CVMFS is ok
[2026-03-12 09:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 09:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 09:27:17] Further information can be found at the LHC@home message board.
[2026-03-12 09:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 09:27:17] Checking for apptainer binary...
[2026-03-12 09:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 09:27:17] Running /usr/bin/apptainer --version
[2026-03-12 09:27:17] apptainer version 1.4.5-2.el9
[2026-03-12 09:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 09:27:18] c-1-3.aglt2.org
[2026-03-12 09:27:18] apptainer works
[2026-03-12 09:27:18] Set ATHENA_PROC_NUMBER=8
[2026-03-12 09:27:18] Set ATHENA_CORE_NUMBER=8
[2026-03-12 09:27:18] Starting ATLAS job with PandaID=7036972314
[2026-03-12 09:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:54:40]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:54:40] 2026-03-12 22:53:27,914 | INFO     | job 7036972314 has state=finished
[2026-03-12 18:54:40] 2026-03-12 22:53:27,915 | INFO     | preparing for final server update for job 7036972314 in state='finished'
[2026-03-12 18:54:40] 2026-03-12 22:53:27,915 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036972314/jobReport.json
[2026-03-12 18:54:40] 2026-03-12 22:53:27,918 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 18:54:40] 2026-03-12 22:53:27,918 | INFO     | this job has now completed (state=finished)
[2026-03-12 18:54:40] 2026-03-12 22:53:27,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 18:54:40] 2026-03-12 22:53:27,919 | INFO     | log transfer has been attempted: DONE
[2026-03-12 18:54:40] 2026-03-12 22:53:27,919 | INFO     | job 7036972314 has finished - writing final server update
[2026-03-12 18:54:40] 2026-03-12 22:53:27,919 | INFO     | total number of processed events: 400 (read)
[2026-03-12 18:54:40] 2026-03-12 22:53:27,959 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036972314/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 18:54:40] 2026-03-12 22:53:27,960 | INFO     | extracted standard info from prmon json
[2026-03-12 18:54:40] 2026-03-12 22:53:27,960 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 18:54:40] 2026-03-12 22:53:27,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 18:54:40] 2026-03-12 22:53:27,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:54:40] 2026-03-12 22:53:27,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:54:40] 2026-03-12 22:53:27,999 | INFO     | fitting pss+swap vs Time
[2026-03-12 18:54:40] 2026-03-12 22:53:28,000 | INFO     | sum of square deviations: 52722852376.58483
[2026-03-12 18:54:40] 2026-03-12 22:53:28,043 | INFO     | sum of deviations: 248956257008.8881
[2026-03-12 18:54:40] 2026-03-12 22:53:28,043 | INFO     | mean x: 1773339064.0505414
[2026-03-12 18:54:40] 2026-03-12 22:53:28,043 | INFO     | mean y: 2522538.5397111913
[2026-03-12 18:54:40] 2026-03-12 22:53:28,044 | INFO     | intersect: -8371149140.68337
[2026-03-12 18:54:40] 2026-03-12 22:53:28,044 | INFO     | chi2: 3.855510831961328
[2026-03-12 18:54:40] 2026-03-12 22:53:28,045 | INFO     | sum of square deviations: 51308215313.66479
[2026-03-12 18:54:40] 2026-03-12 22:53:28,096 | INFO     | sum of deviations: 281995172213.0818
[2026-03-12 18:54:40] 2026-03-12 22:53:28,096 | INFO     | mean x: 1773338911.553734
[2026-03-12 18:54:40] 2026-03-12 22:53:28,096 | INFO     | mean y: 2526072.081967213
[2026-03-12 18:54:40] 2026-03-12 22:53:28,096 | INFO     | intersect: -9743925031.286875
[2026-03-12 18:54:40] 2026-03-12 22:53:28,119 | INFO     | chi2: 3.1645378391279286
[2026-03-12 18:54:40] 2026-03-12 22:53:28,119 | INFO     | current chi2=3.1645378391279286 (change=17.921697615407712 %)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,119 | INFO     | right removable region: 548
[2026-03-12 18:54:40] 2026-03-12 22:53:28,123 | INFO     | sum of square deviations: 51308130523.77056
[2026-03-12 18:54:40] 2026-03-12 22:53:28,132 | INFO     | sum of deviations: 97040309327.29507
[2026-03-12 18:54:40] 2026-03-12 22:53:28,133 | INFO     | mean x: 1773339216.5519125
[2026-03-12 18:54:40] 2026-03-12 22:53:28,133 | INFO     | mean y: 2538890.8142076503
[2026-03-12 18:54:40] 2026-03-12 22:53:28,133 | INFO     | intersect: -3351420498.4622188
[2026-03-12 18:54:40] 2026-03-12 22:53:28,134 | INFO     | chi2: 1.0760818643934602
[2026-03-12 18:54:40] 2026-03-12 22:53:28,134 | INFO     | current chi2=1.0760818643934602 (change=72.08977198370238 %)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,135 | INFO     | sum of square deviations: 49918944277.45396
[2026-03-12 18:54:40] 2026-03-12 22:53:28,148 | INFO     | sum of deviations: 50356318647.345566
[2026-03-12 18:54:40] 2026-03-12 22:53:28,148 | INFO     | mean x: 1773339369.0533087
[2026-03-12 18:54:40] 2026-03-12 22:53:28,148 | INFO     | mean y: 2544008.919117647
[2026-03-12 18:54:40] 2026-03-12 22:53:28,148 | INFO     | intersect: -1786332811.90466
[2026-03-12 18:54:40] 2026-03-12 22:53:28,149 | INFO     | chi2: 0.8345613418822255
[2026-03-12 18:54:40] 2026-03-12 22:53:28,149 | INFO     | current chi2=0.8345613418822255 (change=22.444437593729834 %)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,149 | INFO     | left removable region: 20
[2026-03-12 18:54:40] 2026-03-12 22:53:28,150 | INFO     | sum of square deviations: 45642638935.407234
[2026-03-12 18:54:40] 2026-03-12 22:53:28,161 | INFO     | sum of deviations: 36523006471.717834
[2026-03-12 18:54:40] 2026-03-12 22:53:28,161 | INFO     | mean x: 1773339491.0549242
[2026-03-12 18:54:40] 2026-03-12 22:53:28,161 | INFO     | mean y: 2553290.320075758
[2026-03-12 18:54:40] 2026-03-12 22:53:28,162 | INFO     | intersect: -1416463909.8030384
[2026-03-12 18:54:40] 2026-03-12 22:53:28,163 | INFO     | chi2: 0.007636705181243318
[2026-03-12 18:54:40] 2026-03-12 22:53:28,163 | INFO     | current memory leak: 0.80 B/s (using 528 data points, chi2=0.01)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | could have reported an average CPU frequency of 2863 MHz (22 samples)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | ..............................
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | . Timing measurements:
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | . get job = 0 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | . initial setup = 3 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | . payload setup = 44 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,164 | INFO     | . stage-in = 0 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,165 | INFO     | . payload execution = 33830 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,165 | INFO     | . stage-out = 9 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,165 | INFO     | . log creation = 1 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,165 | INFO     | ..............................
[2026-03-12 18:54:40] 2026-03-12 22:53:28,162 | INFO     | monitor loop #1530: job 0:7036972314 is in state 'finished'
[2026-03-12 18:54:40] 2026-03-12 22:53:28,176 | WARNING  | exception caught: deque index out of range
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | 
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | job summary report
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | --------------------------------------------------
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | PanDA job id: 7036972314
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | task id: 48838605
[2026-03-12 18:54:40] 2026-03-12 22:53:28,305 | INFO     | errors: (none)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | pilot state: finished 
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | transexitcode: 0
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | exeerrorcode: 0
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | exeerrordiag: 
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | exitcode: 0
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | exitmsg: OK
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | cpuconsumptiontime: 50775 s
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | nevents: 400
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | neventsw: 0
[2026-03-12 18:54:40] 2026-03-12 22:53:28,306 | INFO     | pid: 2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | pgrp: 2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | corecount: 8
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | event service: False
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | sizes: {0: 2279692, 1: 2279748, 2: 2279804, 3: 2280265, 4: 2280265, 33882: 2318607, 33883: 2318734, 33893: 2327982}
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | --------------------------------------------------
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | 
[2026-03-12 18:54:40] 2026-03-12 22:53:28,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 18:54:40] 2026-03-12 22:53:28,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | job 7036972314 has completed (purged errors)
[2026-03-12 18:54:40] 2026-03-12 22:53:28,516 | INFO     | overall cleanup function is called
[2026-03-12 18:54:40] 2026-03-12 22:53:29,562 | INFO     | --- collectZombieJob: --- 10, [2064355]
[2026-03-12 18:54:40] 2026-03-12 22:53:29,562 | INFO     | zombie collector waiting for pid 2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:29,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:54:40] 2026-03-12 22:53:29,562 | INFO     | collected zombie processes
[2026-03-12 18:54:40] 2026-03-12 22:53:29,562 | INFO     | will attempt to kill all subprocesses of pid=2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:32,907 | INFO     | process IDs to be killed: [2064355] (in reverse order)
[2026-03-12 18:54:40] 2026-03-12 22:53:34,632 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:54:40] 2026-03-12 22:53:34,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:54:40] 2026-03-12 22:53:34,765 | INFO     | did not find any defunct processes belonging to 2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:34,989 | INFO     | did not find any defunct processes belonging to 2064355
[2026-03-12 18:54:40] 2026-03-12 22:53:34,989 | INFO     | ready for new job
[2026-03-12 18:54:40] 2026-03-12 22:53:34,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:54:40] 2026-03-12 22:53:35,014 | INFO     | **************************************
[2026-03-12 18:54:40] 2026-03-12 22:53:35,014 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 18:54:40] 2026-03-12 22:53:35,014 | INFO     | **************************************
[2026-03-12 18:54:40] 2026-03-12 22:53:35,014 | INFO     | 
[2026-03-12 18:54:40] 2026-03-12 22:53:35,045 | INFO     | architecture information:
[2026-03-12 18:54:40] 2026-03-12 22:53:35,103 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:54:40] 2026-03-12 22:53:35,211 | INFO     | cat /etc/os-release:
[2026-03-12 18:54:40] NAME="CentOS Linux"
[2026-03-12 18:54:40] VERSION="7 (Core)"
[2026-03-12 18:54:40] ID="centos"
[2026-03-12 18:54:40] ID_LIKE="rhel fedora"
[2026-03-12 18:54:40] VERSION_ID="7"
[2026-03-12 18:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:54:40] ANSI_COLOR="0;31"
[2026-03-12 18:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:54:40] HOME_URL="https://www.centos.org/"
[2026-03-12 18:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:54:40] 
[2026-03-12 18:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:54:40] 
[2026-03-12 18:54:40] 2026-03-12 22:53:35,211 | INFO     | **************************************
[2026-03-12 18:54:40] 2026-03-12 22:53:35,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 18:54:40] 2026-03-12 22:53:35,816 | INFO     | sufficient remaining disk space (73818701824 B)
[2026-03-12 18:54:40] 2026-03-12 22:53:35,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:54:40] 2026-03-12 22:53:35,817 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:54:40] 2026-03-12 22:53:35,817 | INFO     | update_server=False
[2026-03-12 18:54:40] 2026-03-12 22:53:35,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:54:40] 2026-03-12 22:53:35,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:54:40] 2026-03-12 22:53:36,700 | INFO     | all job control threads have been joined
[2026-03-12 18:54:40] 2026-03-12 22:53:36,752 | INFO     | all payload control threads have been joined
[2026-03-12 18:54:40] 2026-03-12 22:53:36,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:54:40] 2026-03-12 22:53:36,776 | INFO     | aborting loop
[2026-03-12 18:54:40] 2026-03-12 22:53:36,823 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:36,825 | INFO     | all data control threads have been joined
[2026-03-12 18:54:40] 2026-03-12 22:53:37,091 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,097 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,298 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:54:40] 2026-03-12 22:53:37,438 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,706 | INFO     | [job] control thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,758 | INFO     | [payload] control thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,803 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,830 | INFO     | [data] control thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,841 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,954 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:37,955 | INFO     | [job] validate thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:38,102 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:38,312 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:38,412 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:53:38,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:54:40] 2026-03-12 22:53:42,502 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:54:40] 2026-03-12 22:54:03,968 | INFO     | PID=2048718 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 18:54:40] 2026-03-12 22:54:03,982 | INFO     | .. there are 83 such processes running
[2026-03-12 18:54:40] 2026-03-12 22:54:03,993 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:54:40] 2026-03-12 22:54:03,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:54:40] 2026-03-12 22:54:03,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:54:40] 2026-03-12 22:54:32,235 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:54:40] 2026-03-12 22:54:32,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941359503168)>', '<ExcThread(monitor, started 139940989998848)>']
[2026-03-12 18:54:40] 2026-03-12 22:54:33,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:54:40] 2026-03-12 22:54:33,187 | INFO     | [monitor] control thread has ended
[2026-03-12 18:54:40] 2026-03-12 22:54:37,529 | INFO     | all workflow threads have been joined
[2026-03-12 18:54:40] 2026-03-12 22:54:37,529 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:54:40] 2026-03-12 22:54:37,529 | INFO     | traces error code: 0
[2026-03-12 18:54:40] 2026-03-12 22:54:37,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:54:40] 2026-03-12 22:54:38,926 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:54:40] 2026-03-12 22:54:38,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:54:40] 2026-03-12 22:54:39,025 [wrapper] pilotpid: 2048718
[2026-03-12 18:54:40] 2026-03-12 22:54:39,139 [wrapper] Pilot exit status: 0
[2026-03-12 18:54:40] 2026-03-12 22:54:39,378 [wrapper] pandaids: 7036972314 7036972314
[2026-03-12 18:54:40] 2026-03-12 22:54:39,579 [wrapper] cleanup supervisor_pilot 4152280 2048719
[2026-03-12 18:54:40] 2026-03-12 22:54:39,600 [wrapper] Test setup, not cleaning
[2026-03-12 18:54:40] 2026-03-12 22:54:39,631 [wrapper] apfmon messages muted
[2026-03-12 18:54:40] 2026-03-12 22:54:39,678 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:54:40] 2026-03-12 22:54:39,688 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:54:40]  *** Error codes and diagnostics ***
[2026-03-12 18:54:40]     "exeErrorCode": 0,
[2026-03-12 18:54:40]     "exeErrorDiag": "",
[2026-03-12 18:54:40]     "pilotErrorCode": 0,
[2026-03-12 18:54:40]     "pilotErrorDiag": "",
[2026-03-12 18:54:40]  *** Listing of results directory ***
[2026-03-12 18:54:40] total 772716
[2026-03-12 18:54:40] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 20:08 pilot3.tar.gz
[2026-03-12 18:54:40] -rwx------. 1 boincer umatlas     36322 Mar  3 20:08 runpilot2-wrapper.sh
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 20:08 queuedata.json
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas       100 Mar 12 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:54:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 07:05 run_atlas
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas       105 Mar 12 07:05 job.xml
[2026-03-12 18:54:40] -rw-r--r--. 3 boincer umatlas 282426476 Mar 12 07:05 EVNT.48343768._000175.pool.root.1
[2026-03-12 18:54:40] -rw-r--r--. 3 boincer umatlas 282426476 Mar 12 07:05 ATLAS.root_0
[2026-03-12 18:54:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 07:05 start_atlas.sh
[2026-03-12 18:54:40] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 07:05 shared
[2026-03-12 18:54:40] -rw-r--r--. 2 boincer umatlas    597955 Mar 12 07:05 input.tar.gz
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas         0 Mar 12 07:05 boinc_lockfile
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas      2561 Mar 12 09:27 pandaJob.out
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas        57 Mar 12 09:27 setup.sh.local
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas   1006268 Mar 12 09:28 agis_schedconf.cvmfs.json
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas       438 Mar 12 09:28 workernode_map.json
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas      6839 Mar 12 18:47 init_data.xml
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas 214139177 Mar 12 18:51 HITS.48838605._004351.pool.root.1
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas       532 Mar 12 18:51 boinc_task_state.xml
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas      1042 Mar 12 18:53 memory_monitor_summary.json
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas   1511578 Mar 12 18:53 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas    636770 Mar 12 18:53 log.48838605._004351.job.log.tgz.1
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas      6373 Mar 12 18:53 heartbeat.json
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas        96 Mar 12 18:54 pilot_heartbeat.json
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas      4820 Mar 12 18:54 pilotlog.txt
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 18:54 boinc_mmap_file
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas   3523626 Mar 12 18:54 log.48838605._004351.job.log.1
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas        28 Mar 12 18:54 wrapper_checkpoint.txt
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas       357 Mar 12 18:54 output.list
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas       620 Mar 12 18:54 runtime_log
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas   4177920 Mar 12 18:54 result.tar.gz
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas       779 Mar 12 18:54 SkbNDmRupH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGiILDm31jXLo.diag
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas      9412 Mar 12 18:54 runtime_log.err
[2026-03-12 18:54:40] -rw-r--r--. 1 boincer umatlas     23485 Mar 12 18:54 stderr.txt
[2026-03-12 18:54:40] HITS file was successfully produced:
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas 214139177 Mar 12 18:51 shared/HITS.pool.root.1
[2026-03-12 18:54:40]  *** Contents of shared directory: ***
[2026-03-12 18:54:40] total 489620
[2026-03-12 18:54:40] -rw-r--r--. 3 boincer umatlas 282426476 Mar 12 07:05 ATLAS.root_0
[2026-03-12 18:54:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 07:05 start_atlas.sh
[2026-03-12 18:54:40] -rw-r--r--. 2 boincer umatlas    597955 Mar 12 07:05 input.tar.gz
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas 214139177 Mar 12 18:51 HITS.pool.root.1
[2026-03-12 18:54:40] -rw-------. 1 boincer umatlas   4177920 Mar 12 18:54 result.tar.gz
18:54:41 (2028409): run_atlas exited; CPU time 52944.744084
18:54:41 (2028409): called boinc_finish(0)

</stderr_txt>
]]>

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