Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:28 (499869): wrapper (7.7.26015): starting
00:01:28 (499869): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:01:28] Arguments: --nthreads 8
[2026-03-12 00:01:28] Threads: 8
[2026-03-12 00:01:28] Checking for CVMFS
[2026-03-12 00:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:01:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:01:31] 2.13.3.0 9428 180487 344664 157181 0 251 16741660 18491392 28811 16776704 0 765094842 99.368 1192088880 32834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 00:01:31] CVMFS is ok
[2026-03-12 00:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:01:32] Further information can be found at the LHC@home message board.
[2026-03-12 00:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:01:32] Checking for apptainer binary...
[2026-03-12 00:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:01:32] Running /usr/bin/apptainer --version
[2026-03-12 00:01:32] apptainer version 1.4.5-2.el9
[2026-03-12 00:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:01:34] c-8-38.aglt2.org
[2026-03-12 00:01:34] apptainer works
[2026-03-12 00:01:34] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:01:34] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:01:34] Starting ATLAS job with PandaID=7050397009
[2026-03-12 00:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:40:59]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:40:59] 2026-03-13 01:39:52,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:40:59] 2026-03-13 01:39:52,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:40:59] 2026-03-13 01:39:52,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:40:59] 2026-03-13 01:39:52,204 | INFO     | monitor loop #2844: job 0:7050397009 is in state 'finished'
[2026-03-12 21:40:59] 2026-03-13 01:39:52,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 21:40:59] 2026-03-13 01:39:52,240 | INFO     | fitting pss+swap vs Time
[2026-03-12 21:40:59] 2026-03-13 01:39:52,355 | INFO     | sum of square deviations: 638132879033.9036
[2026-03-12 21:40:59] 2026-03-13 01:39:52,986 | INFO     | sum of deviations: 1065111570351.2847
[2026-03-12 21:40:59] 2026-03-13 01:39:52,986 | INFO     | mean x: 1773327212.9253144
[2026-03-12 21:40:59] 2026-03-13 01:39:52,986 | INFO     | mean y: 2484757.602987421
[2026-03-12 21:40:59] 2026-03-13 01:39:52,986 | INFO     | intersect: -2957386759.070891
[2026-03-12 21:40:59] 2026-03-13 01:39:52,988 | INFO     | chi2: 4.336574632677062
[2026-03-12 21:40:59] 2026-03-13 01:39:53,105 | INFO     | sum of square deviations: 630637717195.379
[2026-03-12 21:40:59] 2026-03-13 01:39:53,315 | INFO     | sum of deviations: 1138269253320.6255
[2026-03-12 21:40:59] 2026-03-13 01:39:53,326 | INFO     | mean x: 1773327060.4348855
[2026-03-12 21:40:59] 2026-03-13 01:39:53,326 | INFO     | mean y: 2486240.868192581
[2026-03-12 21:40:59] 2026-03-13 01:39:53,326 | INFO     | intersect: -3198279609.216721
[2026-03-12 21:40:59] 2026-03-13 01:39:53,328 | INFO     | chi2: 3.6552300359701113
[2026-03-12 21:40:59] 2026-03-13 01:39:53,328 | INFO     | current chi2=3.6552300359701113 (change=15.711584704961979 %)
[2026-03-12 21:40:59] 2026-03-13 01:39:53,328 | INFO     | right removable region: 1266
[2026-03-12 21:40:59] 2026-03-13 01:39:53,338 | INFO     | sum of square deviations: 630635679541.6361
[2026-03-12 21:40:59] 2026-03-13 01:39:53,529 | INFO     | sum of deviations: 703182240692.2101
[2026-03-12 21:40:59] 2026-03-13 01:39:53,539 | INFO     | mean x: 1773327365.436464
[2026-03-12 21:40:59] 2026-03-13 01:39:53,540 | INFO     | mean y: 2492116.636148382
[2026-03-12 21:40:59] 2026-03-13 01:39:53,540 | INFO     | intersect: -1974833858.980647
[2026-03-12 21:40:59] 2026-03-13 01:39:53,551 | INFO     | chi2: 1.3832769689678253
[2026-03-12 21:40:59] 2026-03-13 01:39:53,551 | INFO     | current chi2=1.3832769689678253 (change=68.10208318462864 %)
[2026-03-12 21:40:59] 2026-03-13 01:39:53,553 | INFO     | sum of square deviations: 623197952668.7775
[2026-03-12 21:40:59] 2026-03-13 01:39:53,803 | INFO     | sum of deviations: 570433025308.3358
[2026-03-12 21:40:59] 2026-03-13 01:39:53,804 | INFO     | mean x: 1773327517.9421554
[2026-03-12 21:40:59] 2026-03-13 01:39:53,804 | INFO     | mean y: 2494838.442947702
[2026-03-12 21:40:59] 2026-03-13 01:39:53,804 | INFO     | intersect: -1620688576.3778977
[2026-03-12 21:40:59] 2026-03-13 01:39:53,806 | INFO     | chi2: 1.0294989974640087
[2026-03-12 21:40:59] 2026-03-13 01:39:53,806 | INFO     | current chi2=1.0294989974640087 (change=25.5753532691142 %)
[2026-03-12 21:40:59] 2026-03-13 01:39:53,841 | INFO     | sum of square deviations: 615818539277.3378
[2026-03-12 21:40:59] 2026-03-13 01:39:54,200 | INFO     | sum of deviations: 493071201459.1957
[2026-03-12 21:40:59] 2026-03-13 01:39:54,200 | INFO     | mean x: 1773327670.4518695
[2026-03-12 21:40:59] 2026-03-13 01:39:54,200 | INFO     | mean y: 2496436.4908512332
[2026-03-12 21:40:59] 2026-03-13 01:39:54,200 | INFO     | intersect: -1417364690.2570052
[2026-03-12 21:40:59] 2026-03-13 01:39:54,202 | INFO     | chi2: 0.9093930105386252
[2026-03-12 21:40:59] 2026-03-13 01:39:54,202 | INFO     | current chi2=0.9093930105386252 (change=11.66645011032004 %)
[2026-03-12 21:40:59] 2026-03-13 01:39:54,202 | INFO     | left removable region: 30
[2026-03-12 21:40:59] 2026-03-13 01:39:54,246 | INFO     | sum of square deviations: 585464216239.533
[2026-03-12 21:40:59] 2026-03-13 01:39:54,618 | INFO     | sum of deviations: 386033254083.806
[2026-03-12 21:40:59] 2026-03-13 01:39:54,619 | INFO     | mean x: 1773327944.9805825
[2026-03-12 21:40:59] 2026-03-13 01:39:54,619 | INFO     | mean y: 2501785.491909385
[2026-03-12 21:40:59] 2026-03-13 01:39:54,619 | INFO     | intersect: -1166764479.072627
[2026-03-12 21:40:59] 2026-03-13 01:39:54,621 | INFO     | chi2: 0.01489720877641462
[2026-03-12 21:40:59] 2026-03-13 01:39:54,645 | INFO     | current memory leak: 0.66 B/s (using 1236 data points, chi2=0.01)
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | ..............................
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | . Timing measurements:
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | . get job = 0 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | . initial setup = 68 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | . payload setup = 72 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,647 | INFO     | . stage-in = 0 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,648 | INFO     | . payload execution = 77602 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,648 | INFO     | . stage-out = 5 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,648 | INFO     | . log creation = 0 s
[2026-03-12 21:40:59] 2026-03-13 01:39:54,648 | INFO     | ..............................
[2026-03-12 21:40:59] 2026-03-13 01:39:54,810 | INFO     | monitor loop #2845: job 0:7050397009 is in state 'finished'
[2026-03-12 21:40:59] 2026-03-13 01:39:54,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 21:40:59] 2026-03-13 01:39:56,015 | INFO     | PID=512818 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 21:40:59] 2026-03-13 01:39:56,016 | INFO     | .. there are 38 such processes running
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | 
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | job summary report
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | --------------------------------------------------
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | PanDA job id: 7050397009
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | task id: 48967094
[2026-03-12 21:40:59] 2026-03-13 01:39:56,128 | INFO     | errors: (none)
[2026-03-12 21:40:59] 2026-03-13 01:39:56,129 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 21:40:59] 2026-03-13 01:39:56,129 | INFO     | pilot state: finished 
[2026-03-12 21:40:59] 2026-03-13 01:39:56,129 | INFO     | transexitcode: 0
[2026-03-12 21:40:59] 2026-03-13 01:39:56,135 | INFO     | exeerrorcode: 0
[2026-03-12 21:40:59] 2026-03-13 01:39:56,135 | INFO     | exeerrordiag: 
[2026-03-12 21:40:59] 2026-03-13 01:39:56,135 | INFO     | exitcode: 0
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | exitmsg: OK
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | cpuconsumptiontime: 60735 s
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | nevents: 400
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | neventsw: 0
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | pid: 531085
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | pgrp: 531085
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | corecount: 8
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | event service: False
[2026-03-12 21:40:59] 2026-03-13 01:39:56,136 | INFO     | sizes: {0: 2279132, 1: 2279817, 2: 2279817, 3: 2279817, 4: 2280306, 15: 2280306, 77677: 2336226, 77678: 2336225, 77683: 2345279, 77684: 2345335, 77690: 2345529}
[2026-03-12 21:40:59] 2026-03-13 01:39:56,137 | INFO     | --------------------------------------------------
[2026-03-12 21:40:59] 2026-03-13 01:39:56,137 | INFO     | 
[2026-03-12 21:40:59] 2026-03-13 01:39:56,137 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-12 21:40:59] 2026-03-13 01:39:56,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 21:40:59] 2026-03-13 01:39:56,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,307 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 21:40:59] 2026-03-13 01:39:56,307 | INFO     | job 7050397009 has completed (purged errors)
[2026-03-12 21:40:59] 2026-03-13 01:39:56,307 | INFO     | overall cleanup function is called
[2026-03-12 21:40:59] 2026-03-13 01:39:57,354 | INFO     | --- collectZombieJob: --- 10, [531085]
[2026-03-12 21:40:59] 2026-03-13 01:39:57,354 | INFO     | zombie collector waiting for pid 531085
[2026-03-12 21:40:59] 2026-03-13 01:39:57,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 21:40:59] 2026-03-13 01:39:57,354 | INFO     | collected zombie processes
[2026-03-12 21:40:59] 2026-03-13 01:39:57,354 | INFO     | will attempt to kill all subprocesses of pid=531085
[2026-03-12 21:40:59] 2026-03-13 01:40:01,275 | INFO     | process IDs to be killed: [531085] (in reverse order)
[2026-03-12 21:40:59] 2026-03-13 01:40:02,222 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 21:40:59] 2026-03-13 01:40:02,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 21:40:59] 2026-03-13 01:40:02,255 | INFO     | did not find any defunct processes belonging to 531085
[2026-03-12 21:40:59] 2026-03-13 01:40:02,282 | INFO     | did not find any defunct processes belonging to 531085
[2026-03-12 21:40:59] 2026-03-13 01:40:02,282 | INFO     | ready for new job
[2026-03-12 21:40:59] 2026-03-13 01:40:02,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 21:40:59] 2026-03-13 01:40:02,296 | INFO     | **************************************
[2026-03-12 21:40:59] 2026-03-13 01:40:02,297 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 21:40:59] 2026-03-13 01:40:02,297 | INFO     | **************************************
[2026-03-12 21:40:59] 2026-03-13 01:40:02,297 | INFO     | 
[2026-03-12 21:40:59] 2026-03-13 01:40:02,299 | INFO     | architecture information:
[2026-03-12 21:40:59] 2026-03-13 01:40:02,301 | INFO     | executing command: cat /etc/os-release
[2026-03-12 21:40:59] 2026-03-13 01:40:02,346 | INFO     | cat /etc/os-release:
[2026-03-12 21:40:59] NAME="CentOS Linux"
[2026-03-12 21:40:59] VERSION="7 (Core)"
[2026-03-12 21:40:59] ID="centos"
[2026-03-12 21:40:59] ID_LIKE="rhel fedora"
[2026-03-12 21:40:59] VERSION_ID="7"
[2026-03-12 21:40:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:40:59] ANSI_COLOR="0;31"
[2026-03-12 21:40:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:40:59] HOME_URL="https://www.centos.org/"
[2026-03-12 21:40:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:40:59] 
[2026-03-12 21:40:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:40:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:40:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:40:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:40:59] 
[2026-03-12 21:40:59] 2026-03-13 01:40:02,348 | INFO     | **************************************
[2026-03-12 21:40:59] 2026-03-13 01:40:02,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-12 21:40:59] 2026-03-13 01:40:02,988 | INFO     | sufficient remaining disk space (95443484672 B)
[2026-03-12 21:40:59] 2026-03-13 01:40:02,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:40:59] 2026-03-13 01:40:02,989 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:40:59] 2026-03-13 01:40:02,989 | INFO     | update_server=False
[2026-03-12 21:40:59] 2026-03-13 01:40:02,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:40:59] 2026-03-13 01:40:02,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:40:59] 2026-03-13 01:40:03,096 | INFO     | all payload control threads have been joined
[2026-03-12 21:40:59] 2026-03-13 01:40:03,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:40:59] 2026-03-13 01:40:03,574 | INFO     | aborting loop
[2026-03-12 21:40:59] 2026-03-13 01:40:03,784 | INFO     | all data control threads have been joined
[2026-03-12 21:40:59] 2026-03-13 01:40:03,995 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,032 | INFO     | all job control threads have been joined
[2026-03-12 21:40:59] 2026-03-13 01:40:04,074 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,102 | INFO     | [payload] control thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,268 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,274 | INFO     | [job] validate thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,287 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,287 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,580 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,790 | INFO     | [data] control thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,913 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:04,999 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:05,040 | INFO     | [job] control thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:05,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:40:59] 2026-03-13 01:40:05,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:40:59] 2026-03-13 01:40:05,608 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:06,068 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:09,247 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:13,726 | INFO     | job.realtimelogging is not enabled
[2026-03-12 21:40:59] 2026-03-13 01:40:14,733 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:40:59] 2026-03-13 01:40:30,302 | INFO     | PID=512818 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:40:59] 2026-03-13 01:40:30,302 | INFO     | .. there are 38 such processes running
[2026-03-12 21:40:59] 2026-03-13 01:40:30,302 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:40:59] 2026-03-13 01:40:30,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:40:59] 2026-03-13 01:40:30,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:40:59] 2026-03-13 01:40:50,482 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:40:59] 2026-03-13 01:40:52,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313692989248)>', '<ExcThread(monitor, started 140313217722112)>']
[2026-03-12 21:40:59] 2026-03-13 01:40:52,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:40:59] 2026-03-13 01:40:52,500 | INFO     | [monitor] control thread has ended
[2026-03-12 21:40:59] 2026-03-13 01:40:57,484 | INFO     | all workflow threads have been joined
[2026-03-12 21:40:59] 2026-03-13 01:40:57,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:40:59] 2026-03-13 01:40:57,484 | INFO     | traces error code: 0
[2026-03-12 21:40:59] 2026-03-13 01:40:57,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:40:59] 2026-03-13 01:40:58,106 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:40:59] 2026-03-13 01:40:58,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:40:59] 2026-03-13 01:40:58,196 [wrapper] pilotpid: 512818
[2026-03-12 21:40:59] 2026-03-13 01:40:58,260 [wrapper] Pilot exit status: 0
[2026-03-12 21:40:59] 2026-03-13 01:40:58,406 [wrapper] pandaids: 7050397009
[2026-03-12 21:40:59] 2026-03-13 01:40:58,753 [wrapper] cleanup supervisor_pilot 3721874 512819
[2026-03-12 21:40:59] 2026-03-13 01:40:58,803 [wrapper] Test setup, not cleaning
[2026-03-12 21:40:59] 2026-03-13 01:40:58,822 [wrapper] apfmon messages muted
[2026-03-12 21:40:59] 2026-03-13 01:40:58,845 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:40:59] 2026-03-13 01:40:58,879 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:40:59]  *** Error codes and diagnostics ***
[2026-03-12 21:40:59]     "exeErrorCode": 0,
[2026-03-12 21:40:59]     "exeErrorDiag": "",
[2026-03-12 21:40:59]     "pilotErrorCode": 0,
[2026-03-12 21:40:59]     "pilotErrorDiag": "",
[2026-03-12 21:40:59]  *** Listing of results directory ***
[2026-03-12 21:40:59] total 432808
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 19:24 pilot3.tar.gz
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 19:27 queuedata.json
[2026-03-12 21:40:59] -rwx------. 1 boincer umatlas     36322 Mar 11 19:27 runpilot2-wrapper.sh
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:40:59] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:01 run_atlas
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:01 job.xml
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas 219284063 Mar 12 00:01 EVNT.48967092._000064.pool.root.1
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:01 start_atlas.sh
[2026-03-12 21:40:59] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:01 shared
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas    597530 Mar 12 00:01 input.tar.gz
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:01 boinc_lockfile
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas      2596 Mar 12 00:01 pandaJob.out
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas        57 Mar 12 00:01 setup.sh.local
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas       439 Mar 12 00:04 workernode_map.json
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   1006227 Mar 12 00:04 agis_schedconf.cvmfs.json
[2026-03-12 21:40:59] drwx------. 5 boincer umatlas      4096 Mar 12 00:04 pilot3
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas 203664143 Mar 12 21:38 HITS.48967094._005130.pool.root.1
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas      6659 Mar 12 21:38 init_data.xml
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas       530 Mar 12 21:38 boinc_task_state.xml
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas      1053 Mar 12 21:39 memory_monitor_summary.json
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   1511578 Mar 12 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   1064380 Mar 12 21:39 log.48967094._005130.job.log.tgz.1
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas      6409 Mar 12 21:39 heartbeat.json
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas        95 Mar 12 21:39 pilot_heartbeat.json
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 21:40 boinc_mmap_file
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas        27 Mar 12 21:40 wrapper_checkpoint.txt
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas      4891 Mar 12 21:40 pilotlog.txt
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   7093324 Mar 12 21:40 log.48967094._005130.job.log.1
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas       357 Mar 12 21:40 output.list
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas       620 Mar 12 21:40 runtime_log
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   8171520 Mar 12 21:40 result.tar.gz
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas       659 Mar 12 21:40 UrPODmF9hK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmaJlLDmEhchin.diag
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas      9332 Mar 12 21:40 runtime_log.err
[2026-03-12 21:40:59] -rw-r--r--. 1 boincer umatlas     21291 Mar 12 21:40 stderr.txt
[2026-03-12 21:40:59] HITS file was successfully produced:
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas 203664143 Mar 12 21:38 shared/HITS.pool.root.1
[2026-03-12 21:40:59]  *** Contents of shared directory: ***
[2026-03-12 21:40:59] total 421624
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas 219284063 Mar 12 00:01 ATLAS.root_0
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:01 start_atlas.sh
[2026-03-12 21:40:59] -rw-r--r--. 2 boincer umatlas    597530 Mar 12 00:01 input.tar.gz
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas 203664143 Mar 12 21:38 HITS.pool.root.1
[2026-03-12 21:40:59] -rw-------. 1 boincer umatlas   8171520 Mar 12 21:40 result.tar.gz
21:41:00 (499869): run_atlas exited; CPU time 63544.361671
21:41:00 (499869): called boinc_finish(0)

</stderr_txt>
]]>

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