Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:07 (498726): wrapper (7.7.26015): starting
00:01:07 (498726): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:01:07] Arguments: --nthreads 8
[2026-03-12 00:01:07] Threads: 8
[2026-03-12 00:01:07] Checking for CVMFS
[2026-03-12 00:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:01:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:01:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:01:11] 2.13.3.0 9428 180487 344988 157181 1 251 16741660 18491392 28764 16776704 0 765091696 99.368 1192088880 32834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 00:01:11] CVMFS is ok
[2026-03-12 00:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:01:11] Further information can be found at the LHC@home message board.
[2026-03-12 00:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:01:11] Checking for apptainer binary...
[2026-03-12 00:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:01:11] Running /usr/bin/apptainer --version
[2026-03-12 00:01:12] apptainer version 1.4.5-2.el9
[2026-03-12 00:01:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:01:14] c-8-38.aglt2.org
[2026-03-12 00:01:14] apptainer works
[2026-03-12 00:01:14] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:01:14] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:01:15] Starting ATLAS job with PandaID=7036972367
[2026-03-12 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 21:24:25]  *** The last 200 lines of the pilot log: ***
[2026-03-12 21:24:25] 2026-03-13 01:23:34,851 | INFO     | log transfer has been attempted: DONE
[2026-03-12 21:24:25] 2026-03-13 01:23:34,851 | INFO     | job 7036972367 has finished - writing final server update
[2026-03-12 21:24:25] 2026-03-13 01:23:34,852 | INFO     | total number of processed events: 400 (read)
[2026-03-12 21:24:25] 2026-03-13 01:23:34,866 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7036972367/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 21:24:25] 2026-03-13 01:23:34,867 | INFO     | extracted standard info from prmon json
[2026-03-12 21:24:25] 2026-03-13 01:23:34,867 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 21:24:25] 2026-03-13 01:23:34,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 21:24:25] 2026-03-13 01:23:34,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 21:24:25] 2026-03-13 01:23:34,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 21:24:25] 2026-03-13 01:23:35,002 | INFO     | fitting pss+swap vs Time
[2026-03-12 21:24:25] 2026-03-13 01:23:35,004 | INFO     | sum of square deviations: 614356058716.1608
[2026-03-12 21:24:25] 2026-03-13 01:23:35,063 | INFO     | sum of deviations: 956134986237.4199
[2026-03-12 21:24:25] 2026-03-13 01:23:35,063 | INFO     | mean x: 1773326693.6735668
[2026-03-12 21:24:25] 2026-03-13 01:23:35,063 | INFO     | mean y: 2518409.066878981
[2026-03-12 21:24:25] 2026-03-13 01:23:35,064 | INFO     | intersect: -2757346444.2125826
[2026-03-12 21:24:25] 2026-03-13 01:23:35,065 | INFO     | chi2: 6.2696535307380366
[2026-03-12 21:24:25] 2026-03-13 01:23:35,067 | INFO     | sum of square deviations: 607048550748.4469
[2026-03-12 21:24:25] 2026-03-13 01:23:35,113 | INFO     | sum of deviations: 1194294818569.8323
[2026-03-12 21:24:25] 2026-03-13 01:23:35,114 | INFO     | mean x: 1773326541.1822543
[2026-03-12 21:24:25] 2026-03-13 01:23:35,114 | INFO     | mean y: 2523370.9744204637
[2026-03-12 21:24:25] 2026-03-13 01:23:35,114 | INFO     | intersect: -3486282750.307217
[2026-03-12 21:24:25] 2026-03-13 01:23:35,117 | INFO     | chi2: 4.187940083623832
[2026-03-12 21:24:25] 2026-03-13 01:23:35,117 | INFO     | current chi2=4.187940083623832 (change=33.20300614552706 %)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,119 | INFO     | sum of square deviations: 599798922245.5547
[2026-03-12 21:24:25] 2026-03-13 01:23:35,192 | INFO     | sum of deviations: 1187391889003.4128
[2026-03-12 21:24:25] 2026-03-13 01:23:35,192 | INFO     | mean x: 1773326388.687801
[2026-03-12 21:24:25] 2026-03-13 01:23:35,193 | INFO     | mean y: 2523225.731139647
[2026-03-12 21:24:25] 2026-03-13 01:23:35,193 | INFO     | intersect: -3508042219.4357862
[2026-03-12 21:24:25] 2026-03-13 01:23:35,195 | INFO     | chi2: 4.187678697580663
[2026-03-12 21:24:25] 2026-03-13 01:23:35,195 | INFO     | current chi2=4.187678697580663 (change=0.00624139882495349 %)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,195 | INFO     | right removable region: 1245
[2026-03-12 21:24:25] 2026-03-13 01:23:35,197 | INFO     | sum of square deviations: 607046501255.6033
[2026-03-12 21:24:25] 2026-03-13 01:23:35,308 | INFO     | sum of deviations: 571727211472.2659
[2026-03-12 21:24:25] 2026-03-13 01:23:35,308 | INFO     | mean x: 1773326846.186251
[2026-03-12 21:24:25] 2026-03-13 01:23:35,308 | INFO     | mean y: 2526426.410871303
[2026-03-12 21:24:25] 2026-03-13 01:23:35,308 | INFO     | intersect: -1667624395.1520998
[2026-03-12 21:24:25] 2026-03-13 01:23:35,310 | INFO     | chi2: 2.9833171366744518
[2026-03-12 21:24:25] 2026-03-13 01:23:35,310 | INFO     | current chi2=2.9833171366744518 (change=52.41655504489626 %)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,326 | INFO     | sum of square deviations: 599795664522.8859
[2026-03-12 21:24:25] 2026-03-13 01:23:35,453 | INFO     | sum of deviations: 412922381078.1987
[2026-03-12 21:24:25] 2026-03-13 01:23:35,454 | INFO     | mean x: 1773326998.693419
[2026-03-12 21:24:25] 2026-03-13 01:23:35,454 | INFO     | mean y: 2529765.1340288925
[2026-03-12 21:24:25] 2026-03-13 01:23:35,454 | INFO     | intersect: -1218296676.3395286
[2026-03-12 21:24:25] 2026-03-13 01:23:35,464 | INFO     | chi2: 2.4306072351129653
[2026-03-12 21:24:25] 2026-03-13 01:23:35,465 | INFO     | current chi2=2.4306072351129653 (change=18.52668946143622 %)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,465 | INFO     | left removable region: 20
[2026-03-12 21:24:25] 2026-03-13 01:23:35,466 | INFO     | sum of square deviations: 569975714100.4894
[2026-03-12 21:24:25] 2026-03-13 01:23:35,587 | INFO     | sum of deviations: 486103554199.2537
[2026-03-12 21:24:25] 2026-03-13 01:23:35,587 | INFO     | mean x: 1773326968.2204082
[2026-03-12 21:24:25] 2026-03-13 01:23:35,587 | INFO     | mean y: 2538141.813877551
[2026-03-12 21:24:25] 2026-03-13 01:23:35,587 | INFO     | intersect: -1509843036.3381257
[2026-03-12 21:24:25] 2026-03-13 01:23:35,602 | INFO     | chi2: 0.06941217800515068
[2026-03-12 21:24:25] 2026-03-13 01:23:35,602 | INFO     | current memory leak: 0.85 B/s (using 1225 data points, chi2=0.07)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,603 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | ..............................
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . Timing measurements:
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . get job = 1 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . initial setup = 68 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . payload setup = 68 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . stage-in = 1 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . payload execution = 76648 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,604 | INFO     | . stage-out = 14 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,656 | INFO     | . log creation = 6 s
[2026-03-12 21:24:25] 2026-03-13 01:23:35,656 | INFO     | ..............................
[2026-03-12 21:24:25] 2026-03-13 01:23:36,369 | INFO     | time since job start (76756s) is within the limit (349056.0s)
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | 
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | job summary report
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | --------------------------------------------------
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | PanDA job id: 7036972367
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | task id: 48838605
[2026-03-12 21:24:25] 2026-03-13 01:23:36,916 | INFO     | errors: (none)
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | pilot state: finished 
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | transexitcode: 0
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | exeerrorcode: 0
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | exeerrordiag: 
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | exitcode: 0
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | exitmsg: OK
[2026-03-12 21:24:25] 2026-03-13 01:23:36,917 | INFO     | cpuconsumptiontime: 57933 s
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | nevents: 400
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | neventsw: 0
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | pid: 525678
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | pgrp: 525678
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | corecount: 8
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | event service: False
[2026-03-12 21:24:25] 2026-03-13 01:23:36,943 | INFO     | sizes: {0: 2279097, 1: 2279698, 2: 2279782, 5: 2279866, 9: 2279866, 12: 2280455, 13: 2280455, 76719: 2336470, 76721: 2336469, 76736: 2345523, 76738: 2345579, 76742
[2026-03-12 21:24:25] 2026-03-13 01:23:36,944 | INFO     | --------------------------------------------------
[2026-03-12 21:24:25] 2026-03-13 01:23:36,944 | INFO     | 
[2026-03-12 21:24:25] 2026-03-13 01:23:36,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 21:24:25] 2026-03-13 01:23:37,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,421 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,421 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 21:24:25] 2026-03-13 01:23:37,424 | INFO     | job 7036972367 has completed (purged errors)
[2026-03-12 21:24:25] 2026-03-13 01:23:37,424 | INFO     | overall cleanup function is called
[2026-03-12 21:24:25] 2026-03-13 01:23:38,603 | INFO     | --- collectZombieJob: --- 10, [525678]
[2026-03-12 21:24:25] 2026-03-13 01:23:38,603 | INFO     | zombie collector waiting for pid 525678
[2026-03-12 21:24:25] 2026-03-13 01:23:38,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 21:24:25] 2026-03-13 01:23:38,603 | INFO     | collected zombie processes
[2026-03-12 21:24:25] 2026-03-13 01:23:38,603 | INFO     | will attempt to kill all subprocesses of pid=525678
[2026-03-12 21:24:25] 2026-03-13 01:23:40,173 | INFO     | process IDs to be killed: [525678] (in reverse order)
[2026-03-12 21:24:25] 2026-03-13 01:23:40,684 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 21:24:25] 2026-03-13 01:23:40,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 21:24:25] 2026-03-13 01:23:40,728 | INFO     | did not find any defunct processes belonging to 525678
[2026-03-12 21:24:25] 2026-03-13 01:23:40,791 | INFO     | did not find any defunct processes belonging to 525678
[2026-03-12 21:24:25] 2026-03-13 01:23:40,791 | INFO     | ready for new job
[2026-03-12 21:24:25] 2026-03-13 01:23:40,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 21:24:25] 2026-03-13 01:23:40,805 | INFO     | **************************************
[2026-03-12 21:24:25] 2026-03-13 01:23:40,805 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 21:24:25] 2026-03-13 01:23:40,805 | INFO     | **************************************
[2026-03-12 21:24:25] 2026-03-13 01:23:40,805 | INFO     | 
[2026-03-12 21:24:25] 2026-03-13 01:23:40,807 | INFO     | architecture information:
[2026-03-12 21:24:25] 2026-03-13 01:23:40,819 | INFO     | executing command: cat /etc/os-release
[2026-03-12 21:24:25] 2026-03-13 01:23:41,013 | INFO     | cat /etc/os-release:
[2026-03-12 21:24:25] NAME="CentOS Linux"
[2026-03-12 21:24:25] VERSION="7 (Core)"
[2026-03-12 21:24:25] ID="centos"
[2026-03-12 21:24:25] ID_LIKE="rhel fedora"
[2026-03-12 21:24:25] VERSION_ID="7"
[2026-03-12 21:24:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 21:24:25] ANSI_COLOR="0;31"
[2026-03-12 21:24:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 21:24:25] HOME_URL="https://www.centos.org/"
[2026-03-12 21:24:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 21:24:25] 
[2026-03-12 21:24:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 21:24:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 21:24:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 21:24:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 21:24:25] 
[2026-03-12 21:24:25] 2026-03-13 01:23:41,013 | INFO     | **************************************
[2026-03-12 21:24:25] 2026-03-13 01:23:41,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 21:24:25] 2026-03-13 01:23:41,744 | INFO     | sufficient remaining disk space (94266982400 B)
[2026-03-12 21:24:25] 2026-03-13 01:23:41,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 21:24:25] 2026-03-13 01:23:41,745 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 21:24:25] 2026-03-13 01:23:41,745 | INFO     | update_server=False
[2026-03-12 21:24:25] 2026-03-13 01:23:41,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 21:24:25] 2026-03-13 01:23:41,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:24:25] 2026-03-13 01:23:41,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 21:24:25] 2026-03-13 01:23:42,060 | INFO     | all payload control threads have been joined
[2026-03-12 21:24:25] 2026-03-13 01:23:42,476 | INFO     | all job control threads have been joined
[2026-03-12 21:24:25] 2026-03-13 01:23:42,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 21:24:25] 2026-03-13 01:23:42,512 | INFO     | aborting loop
[2026-03-12 21:24:25] 2026-03-13 01:23:42,751 | INFO     | [job] retrieve thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:42,936 | INFO     | all data control threads have been joined
[2026-03-12 21:24:25] 2026-03-13 01:23:42,936 | INFO     | [job] queue monitor thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,066 | INFO     | [payload] control thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,365 | INFO     | [payload] validate_post thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,423 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,426 | INFO     | [data] copytool_in thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,479 | INFO     | [payload] failed_post thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,483 | INFO     | [job] control thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,515 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,540 | INFO     | [job] job monitor thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,712 | INFO     | [job] validate thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,878 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 21:24:25] 2026-03-13 01:23:43,944 | INFO     | [data] control thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,944 | INFO     | [data] copytool_out thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:43,961 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:23:47,951 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 21:24:25] 2026-03-13 01:24:15,293 | INFO     | [monitor] cgroup control has ended
[2026-03-12 21:24:25] 2026-03-13 01:24:15,321 | INFO     | PID=510847 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 21:24:25] 2026-03-13 01:24:15,332 | INFO     | .. there are 39 such processes running
[2026-03-12 21:24:25] 2026-03-13 01:24:15,347 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 21:24:25] 2026-03-13 01:24:15,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 21:24:25] 2026-03-13 01:24:15,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 21:24:25] 2026-03-13 01:24:15,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414838658880)>', '<ExcThread(monitor, started 140414216562432)>']
[2026-03-12 21:24:25] 2026-03-13 01:24:16,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 21:24:25] 2026-03-13 01:24:16,354 | INFO     | [monitor] control thread has ended
[2026-03-12 21:24:25] 2026-03-13 01:24:20,527 | INFO     | all workflow threads have been joined
[2026-03-12 21:24:25] 2026-03-13 01:24:20,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 21:24:25] 2026-03-13 01:24:20,527 | INFO     | traces error code: 0
[2026-03-12 21:24:25] 2026-03-13 01:24:20,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 21:24:25] 2026-03-13 01:24:21,965 [wrapper] ==== pilot stdout END ====
[2026-03-12 21:24:25] 2026-03-13 01:24:22,019 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 21:24:25] 2026-03-13 01:24:22,108 [wrapper] pilotpid: 510847
[2026-03-12 21:24:25] 2026-03-13 01:24:22,159 [wrapper] Pilot exit status: 0
[2026-03-12 21:24:25] 2026-03-13 01:24:22,485 [wrapper] pandaids: 7036972367
[2026-03-12 21:24:25] 2026-03-13 01:24:23,847 [wrapper] cleanup supervisor_pilot 3688151 510848
[2026-03-12 21:24:25] 2026-03-13 01:24:23,924 [wrapper] Test setup, not cleaning
[2026-03-12 21:24:25] 2026-03-13 01:24:23,964 [wrapper] apfmon messages muted
[2026-03-12 21:24:25] 2026-03-13 01:24:24,013 [wrapper] ==== wrapper stdout END ====
[2026-03-12 21:24:25] 2026-03-13 01:24:24,084 [wrapper] ==== wrapper stderr END ====
[2026-03-12 21:24:25]  *** Error codes and diagnostics ***
[2026-03-12 21:24:25]     "exeErrorCode": 0,
[2026-03-12 21:24:25]     "exeErrorDiag": "",
[2026-03-12 21:24:25]     "pilotErrorCode": 0,
[2026-03-12 21:24:25]     "pilotErrorDiag": "",
[2026-03-12 21:24:25]  *** Listing of results directory ***
[2026-03-12 21:24:25] total 515448
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 20:08 pilot3.tar.gz
[2026-03-12 21:24:25] -rwx------. 1 boincer umatlas     36322 Mar  3 20:08 runpilot2-wrapper.sh
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 20:08 queuedata.json
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 21:24:25] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:01 run_atlas
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:01 job.xml
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas 288333359 Mar 12 00:01 EVNT.48343768._000177.pool.root.1
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:01 start_atlas.sh
[2026-03-12 21:24:25] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:01 shared
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas    597957 Mar 12 00:01 input.tar.gz
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:01 boinc_lockfile
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas      2564 Mar 12 00:01 pandaJob.out
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas        57 Mar 12 00:01 setup.sh.local
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas       440 Mar 12 00:04 workernode_map.json
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   1006227 Mar 12 00:04 agis_schedconf.cvmfs.json
[2026-03-12 21:24:25] drwx------. 5 boincer umatlas      4096 Mar 12 00:04 pilot3
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas 218341338 Mar 12 21:20 HITS.48838605._004404.pool.root.1
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas       530 Mar 12 21:20 boinc_task_state.xml
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas      6660 Mar 12 21:20 init_data.xml
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas      1055 Mar 12 21:23 memory_monitor_summary.json
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   1511578 Mar 12 21:23 agis_ddmendpoints.agis.ALL.json
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   1089202 Mar 12 21:23 log.48838605._004404.job.log.tgz.1
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas      6413 Mar 12 21:23 heartbeat.json
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas        28 Mar 12 21:24 wrapper_checkpoint.txt
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas        95 Mar 12 21:24 pilot_heartbeat.json
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas      4819 Mar 12 21:24 pilotlog.txt
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   7519070 Mar 12 21:24 log.48838605._004404.job.log.1
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas       357 Mar 12 21:24 output.list
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas       620 Mar 12 21:24 runtime_log
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   8622080 Mar 12 21:24 result.tar.gz
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas      9332 Mar 12 21:24 runtime_log.err
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas       659 Mar 12 21:24 KlsNDmRupH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqmGLDmfXJFem.diag
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 21:24 boinc_mmap_file
[2026-03-12 21:24:25] -rw-r--r--. 1 boincer umatlas     21176 Mar 12 21:24 stderr.txt
[2026-03-12 21:24:25] HITS file was successfully produced:
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas 218341338 Mar 12 21:20 shared/HITS.pool.root.1
[2026-03-12 21:24:25]  *** Contents of shared directory: ***
[2026-03-12 21:24:25] total 503824
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas 288333359 Mar 12 00:01 ATLAS.root_0
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:01 start_atlas.sh
[2026-03-12 21:24:25] -rw-r--r--. 2 boincer umatlas    597957 Mar 12 00:01 input.tar.gz
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas 218341338 Mar 12 21:20 HITS.pool.root.1
[2026-03-12 21:24:25] -rw-------. 1 boincer umatlas   8622080 Mar 12 21:24 result.tar.gz
21:24:47 (498726): run_atlas exited; CPU time 60895.746452
21:24:47 (498726): called boinc_finish(0)

</stderr_txt>
]]>

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