Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:02 (5223): wrapper (7.7.26015): starting
18:04:02 (5223): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 18:04:02] Arguments: --nthreads 8
[2026-03-12 18:04:02] Threads: 8
[2026-03-12 18:04:02] Checking for CVMFS
[2026-03-12 18:04:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 18:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 18:04:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 18:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 18:04:07] 2.11.2.0 27430 124973 134072 157208 0 54 23457398 25165825 188 130560 158 36622099 99.830 26908596 1007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 18:04:07] CVMFS is ok
[2026-03-12 18:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 18:04:07] Checking for apptainer binary...
[2026-03-12 18:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 18:04:07] Running /usr/bin/apptainer --version
[2026-03-12 18:04:08] apptainer version 1.3.2-1.el7
[2026-03-12 18:04:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 18:04:34] cg-vwn400.simple-grid.lan
[2026-03-12 18:04:34] apptainer works
[2026-03-12 18:04:34] Set ATHENA_PROC_NUMBER=8
[2026-03-12 18:04:34] Set ATHENA_CORE_NUMBER=8
[2026-03-12 18:04:34] Starting ATLAS job with PandaID=7051035132
[2026-03-12 18:04:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 22:48:14]  *** The last 200 lines of the pilot log: ***
[2026-03-12 22:48:14] 2026-03-12 21:47:31,404 | INFO     | log transfer has been attempted: DONE
[2026-03-12 22:48:14] 2026-03-12 21:47:31,404 | INFO     | job 7051035132 has finished - writing final server update
[2026-03-12 22:48:14] 2026-03-12 21:47:31,404 | INFO     | total number of processed events: 400 (read)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,406 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7051035132/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,407 | INFO     | extracted standard info from prmon json
[2026-03-12 22:48:14] 2026-03-12 21:47:31,407 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 22:48:14] 2026-03-12 21:47:31,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 22:48:14] 2026-03-12 21:47:31,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 22:48:14] 2026-03-12 21:47:31,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 22:48:14] 2026-03-12 21:47:31,413 | INFO     | fitting pss+swap vs Time
[2026-03-12 22:48:14] 2026-03-12 21:47:31,414 | INFO     | sum of square deviations: 5968658887.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,417 | INFO     | sum of deviations: 87802963118.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,417 | INFO     | mean x: 1773343870.5
[2026-03-12 22:48:14] 2026-03-12 21:47:31,417 | INFO     | mean y: 2443096.6417910447
[2026-03-12 22:48:14] 2026-03-12 21:47:31,417 | INFO     | intersect: -26084630968.886536
[2026-03-12 22:48:14] 2026-03-12 21:47:31,417 | INFO     | chi2: 8.92358620156067
[2026-03-12 22:48:14] 2026-03-12 21:47:31,418 | INFO     | sum of square deviations: 5640782972.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,420 | INFO     | sum of deviations: 103889085848.00003
[2026-03-12 22:48:14] 2026-03-12 21:47:31,421 | INFO     | mean x: 1773343718.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,421 | INFO     | mean y: 2450452.8098859317
[2026-03-12 22:48:14] 2026-03-12 21:47:31,421 | INFO     | intersect: -32658096615.17852
[2026-03-12 22:48:14] 2026-03-12 21:47:31,421 | INFO     | chi2: 8.219354690536505
[2026-03-12 22:48:14] 2026-03-12 21:47:31,422 | INFO     | current chi2=8.219354690536505 (change=7.89179927349164 %)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,422 | INFO     | right removable region: 262
[2026-03-12 22:48:14] 2026-03-12 21:47:31,422 | INFO     | sum of square deviations: 5640782972.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,425 | INFO     | sum of deviations: -7470018398.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,425 | INFO     | mean x: 1773344023.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,425 | INFO     | mean y: 2487389.969581749
[2026-03-12 22:48:14] 2026-03-12 21:47:31,425 | INFO     | intersect: 2350904718.4768157
[2026-03-12 22:48:14] 2026-03-12 21:47:31,425 | INFO     | chi2: 3.6954754044056277
[2026-03-12 22:48:14] 2026-03-12 21:47:31,426 | INFO     | current chi2=3.6954754044056277 (change=58.58755302033934 %)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,426 | INFO     | sum of square deviations: 5325139844.5
[2026-03-12 22:48:14] 2026-03-12 21:47:31,428 | INFO     | sum of deviations: -75057483122.99994
[2026-03-12 22:48:14] 2026-03-12 21:47:31,429 | INFO     | mean x: 1773344175.5
[2026-03-12 22:48:14] 2026-03-12 21:47:31,429 | INFO     | mean y: 2519984.6434108526
[2026-03-12 22:48:14] 2026-03-12 21:47:31,429 | INFO     | intersect: 24997685259.285896
[2026-03-12 22:48:14] 2026-03-12 21:47:31,429 | INFO     | chi2: 1.153589288634313
[2026-03-12 22:48:14] 2026-03-12 21:47:31,430 | INFO     | current chi2=1.153589288634313 (change=68.78373788500822 %)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,430 | INFO     | sum of square deviations: 5021496942.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,432 | INFO     | sum of deviations: -84440799156.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,433 | INFO     | mean x: 1773344328.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,433 | INFO     | mean y: 2524663.3201581025
[2026-03-12 22:48:14] 2026-03-12 21:47:31,433 | INFO     | intersect: 29822838001.087357
[2026-03-12 22:48:14] 2026-03-12 21:47:31,433 | INFO     | chi2: 1.0444480136328778
[2026-03-12 22:48:14] 2026-03-12 21:47:31,433 | INFO     | current chi2=1.0444480136328778 (change=9.461016678704013 %)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,434 | INFO     | left removable region: 30
[2026-03-12 22:48:14] 2026-03-12 21:47:31,434 | INFO     | sum of square deviations: 3871990738.0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,436 | INFO     | sum of deviations: -43884327047.50001
[2026-03-12 22:48:14] 2026-03-12 21:47:31,436 | INFO     | mean x: 1773344602.5
[2026-03-12 22:48:14] 2026-03-12 21:47:31,436 | INFO     | mean y: 2521611.702586207
[2026-03-12 22:48:14] 2026-03-12 21:47:31,437 | INFO     | intersect: 20101235624.697964
[2026-03-12 22:48:14] 2026-03-12 21:47:31,437 | INFO     | chi2: 0.21345028307330133
[2026-03-12 22:48:14] 2026-03-12 21:47:31,437 | INFO     | current memory leak: -11.33 B/s (using 232 data points, chi2=0.21)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | ..............................
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | . Timing measurements:
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | . get job = 0 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | . initial setup = 119 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,438 | INFO     | . payload setup = 159 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,439 | INFO     | . stage-in = 0 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,439 | INFO     | . payload execution = 16439 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,439 | INFO     | . stage-out = 1 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,439 | INFO     | . log creation = 0 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,439 | INFO     | ..............................
[2026-03-12 22:48:14] 2026-03-12 21:47:31,553 | INFO     | 
[2026-03-12 22:48:14] 2026-03-12 21:47:31,553 | INFO     | job summary report
[2026-03-12 22:48:14] 2026-03-12 21:47:31,553 | INFO     | --------------------------------------------------
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | PanDA job id: 7051035132
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | task id: 48967085
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | errors: (none)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | pilot state: finished 
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | transexitcode: 0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | exeerrorcode: 0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | exeerrordiag: 
[2026-03-12 22:48:14] 2026-03-12 21:47:31,554 | INFO     | exitcode: 0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | exitmsg: OK
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | cpuconsumptiontime: 65502 s
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | nevents: 400
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | neventsw: 0
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | pid: 13660
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | pgrp: 13660
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | corecount: 8
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | event service: False
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | sizes: {0: 2279152, 1: 2279838, 2: 2280299, 3: 2280299, 16602: 2312134, 16603: 2312133, 16605: 2321317, 16607: 2321373, 16608: 2321567}
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | --------------------------------------------------
[2026-03-12 22:48:14] 2026-03-12 21:47:31,555 | INFO     | 
[2026-03-12 22:48:14] 2026-03-12 21:47:31,556 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-03-12 22:48:14] 2026-03-12 21:47:31,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 22:48:14] 2026-03-12 21:47:31,596 | INFO     | job 7051035132 has completed (purged errors)
[2026-03-12 22:48:14] 2026-03-12 21:47:31,596 | INFO     | overall cleanup function is called
[2026-03-12 22:48:14] 2026-03-12 21:47:32,604 | INFO     | --- collectZombieJob: --- 10, [13660]
[2026-03-12 22:48:14] 2026-03-12 21:47:32,604 | INFO     | zombie collector waiting for pid 13660
[2026-03-12 22:48:14] 2026-03-12 21:47:32,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 22:48:14] 2026-03-12 21:47:32,605 | INFO     | collected zombie processes
[2026-03-12 22:48:14] 2026-03-12 21:47:32,605 | INFO     | will attempt to kill all subprocesses of pid=13660
[2026-03-12 22:48:14] 2026-03-12 21:47:32,675 | INFO     | process IDs to be killed: [13660] (in reverse order)
[2026-03-12 22:48:14] 2026-03-12 21:47:32,745 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 22:48:14] 2026-03-12 21:47:32,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 22:48:14] 2026-03-12 21:47:32,747 | INFO     | did not find any defunct processes belonging to 13660
[2026-03-12 22:48:14] 2026-03-12 21:47:32,749 | INFO     | did not find any defunct processes belonging to 13660
[2026-03-12 22:48:14] 2026-03-12 21:47:32,749 | INFO     | ready for new job
[2026-03-12 22:48:14] 2026-03-12 21:47:32,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 22:48:14] 2026-03-12 21:47:32,751 | INFO     | **************************************
[2026-03-12 22:48:14] 2026-03-12 21:47:32,752 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 22:48:14] 2026-03-12 21:47:32,752 | INFO     | **************************************
[2026-03-12 22:48:14] 2026-03-12 21:47:32,752 | INFO     | 
[2026-03-12 22:48:14] 2026-03-12 21:47:32,752 | INFO     | pilot is running in a VM
[2026-03-12 22:48:14] 2026-03-12 21:47:32,753 | INFO     | architecture information:
[2026-03-12 22:48:14] 2026-03-12 21:47:32,753 | INFO     | executing command: cat /etc/os-release
[2026-03-12 22:48:14] 2026-03-12 21:47:32,783 | INFO     | cat /etc/os-release:
[2026-03-12 22:48:14] NAME="CentOS Linux"
[2026-03-12 22:48:14] VERSION="7 (Core)"
[2026-03-12 22:48:14] ID="centos"
[2026-03-12 22:48:14] ID_LIKE="rhel fedora"
[2026-03-12 22:48:14] VERSION_ID="7"
[2026-03-12 22:48:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 22:48:14] ANSI_COLOR="0;31"
[2026-03-12 22:48:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 22:48:14] HOME_URL="https://www.centos.org/"
[2026-03-12 22:48:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 22:48:14] 
[2026-03-12 22:48:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 22:48:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 22:48:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 22:48:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 22:48:14] 
[2026-03-12 22:48:14] 2026-03-12 21:47:32,783 | INFO     | **************************************
[2026-03-12 22:48:14] 2026-03-12 21:47:33,286 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-03-12 22:48:14] 2026-03-12 21:47:33,307 | INFO     | sufficient remaining disk space (497143513088 B)
[2026-03-12 22:48:14] 2026-03-12 21:47:33,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 22:48:14] 2026-03-12 21:47:33,308 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 22:48:14] 2026-03-12 21:47:33,308 | INFO     | update_server=False
[2026-03-12 22:48:14] 2026-03-12 21:47:33,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 22:48:14] 2026-03-12 21:47:33,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:48:14] 2026-03-12 21:47:33,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 22:48:14] 2026-03-12 21:47:33,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:48:14] 2026-03-12 21:47:33,562 | INFO     | aborting loop
[2026-03-12 22:48:14] 2026-03-12 21:47:34,004 | INFO     | all data control threads have been joined
[2026-03-12 22:48:14] 2026-03-12 21:47:34,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 22:48:14] 2026-03-12 21:47:34,274 | INFO     | all payload control threads have been joined
[2026-03-12 22:48:14] 2026-03-12 21:47:34,314 | INFO     | [job] retrieve thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,314 | INFO     | [job] queue monitor thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,377 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,380 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,568 | INFO     | [job] job monitor thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,634 | INFO     | [payload] failed_post thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,642 | INFO     | [data] copytool_in thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:34,941 | INFO     | all job control threads have been joined
[2026-03-12 22:48:14] 2026-03-12 21:47:35,009 | INFO     | [data] control thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,155 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,279 | INFO     | [payload] control thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,493 | INFO     | [payload] validate_post thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,774 | INFO     | [job] validate thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:35,947 | INFO     | [job] control thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:36,096 | INFO     | [data] copytool_out thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:47:37,312 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 22:48:14] 2026-03-12 21:48:03,157 | INFO     | PID=9200 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 22:48:14] 2026-03-12 21:48:03,158 | INFO     | .. there are 2 such processes running
[2026-03-12 22:48:14] 2026-03-12 21:48:03,158 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 22:48:14] 2026-03-12 21:48:03,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 22:48:14] 2026-03-12 21:48:03,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 22:48:14] 2026-03-12 21:48:08,702 | INFO     | [monitor] cgroup control has ended
[2026-03-12 22:48:14] 2026-03-12 21:48:09,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632172226368)>', '<ExcThread(monitor, started 140631884146432)>']
[2026-03-12 22:48:14] 2026-03-12 21:48:10,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 22:48:14] 2026-03-12 21:48:10,194 | INFO     | [monitor] control thread has ended
[2026-03-12 22:48:14] 2026-03-12 21:48:14,303 | INFO     | all workflow threads have been joined
[2026-03-12 22:48:14] 2026-03-12 21:48:14,304 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 22:48:14] 2026-03-12 21:48:14,304 | INFO     | traces error code: 0
[2026-03-12 22:48:14] 2026-03-12 21:48:14,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 22:48:14] 2026-03-12 21:48:14,460 [wrapper] ==== pilot stdout END ====
[2026-03-12 22:48:14] 2026-03-12 21:48:14,467 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 22:48:14] 2026-03-12 21:48:14,476 [wrapper] pilotpid: 9200
[2026-03-12 22:48:14] 2026-03-12 21:48:14,485 [wrapper] Pilot exit status: 0
[2026-03-12 22:48:14] 2026-03-12 21:48:14,514 [wrapper] pandaids: 7051035132
[2026-03-12 22:48:14] 2026-03-12 21:48:14,550 [wrapper] cleanup supervisor_pilot 27704 9201
[2026-03-12 22:48:14] 2026-03-12 21:48:14,554 [wrapper] Test setup, not cleaning
[2026-03-12 22:48:14] 2026-03-12 21:48:14,563 [wrapper] apfmon messages muted
[2026-03-12 22:48:14] 2026-03-12 21:48:14,568 [wrapper] ==== wrapper stdout END ====
[2026-03-12 22:48:14] 2026-03-12 21:48:14,576 [wrapper] ==== wrapper stderr END ====
[2026-03-12 22:48:14]  *** Error codes and diagnostics ***
[2026-03-12 22:48:14]     "exeErrorCode": 0,
[2026-03-12 22:48:14]     "exeErrorDiag": "",
[2026-03-12 22:48:14]     "pilotErrorCode": 0,
[2026-03-12 22:48:14]     "pilotErrorDiag": "",
[2026-03-12 22:48:14]  *** Listing of results directory ***
[2026-03-12 22:48:14] total 401256
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc    585013 Mar 12 04:25 pilot3.tar.gz
[2026-03-12 22:48:14] -rwx------. 1 boinc boinc     36322 Mar 12 04:25 runpilot2-wrapper.sh
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc      5111 Mar 12 04:26 queuedata.json
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc       100 Mar 12 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 22:48:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 18:04 run_atlas
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc       105 Mar 12 18:04 job.xml
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc      6392 Mar 12 18:04 init_data.xml
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc 211995343 Mar 12 18:04 EVNT.48967083._000590.pool.root.1
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:04 start_atlas.sh
[2026-03-12 22:48:14] drwxrwx--x. 2 boinc boinc        68 Mar 12 18:04 shared
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:04 input.tar.gz
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc         0 Mar 12 18:04 boinc_lockfile
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc      2563 Mar 12 18:04 pandaJob.out
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc       415 Mar 12 18:10 workernode_map.json
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc   1006536 Mar 12 18:10 agis_schedconf.cvmfs.json
[2026-03-12 22:48:14] drwx------. 5 boinc boinc      4096 Mar 12 18:10 pilot3
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc 189308996 Mar 12 22:46 HITS.48967085._013946.pool.root.1
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc       531 Mar 12 22:47 boinc_task_state.xml
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc        95 Mar 12 22:47 pilot_heartbeat.json
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc      1019 Mar 12 22:47 memory_monitor_summary.json
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc   1511578 Mar 12 22:47 agis_ddmendpoints.agis.ALL.json
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc    496899 Mar 12 22:47 log.48967085._013946.job.log.tgz.1
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc      6327 Mar 12 22:47 heartbeat.json
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc      8192 Mar 12 22:48 boinc_mmap_file
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc        28 Mar 12 22:48 wrapper_checkpoint.txt
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc      4880 Mar 12 22:48 pilotlog.txt
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc   2334099 Mar 12 22:48 log.48967085._013946.job.log.1
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc       357 Mar 12 22:48 output.list
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc       620 Mar 12 22:48 runtime_log
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc   2846720 Mar 12 22:48 result.tar.gz
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc      8832 Mar 12 22:48 runtime_log.err
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc       656 Mar 12 22:48 qYcLDmDrlK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4qlLDmLZB24m.diag
[2026-03-12 22:48:14] -rw-r--r--. 1 boinc boinc     20719 Mar 12 22:48 stderr.txt
[2026-03-12 22:48:14] HITS file was successfully produced:
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc 189308996 Mar 12 22:46 shared/HITS.pool.root.1
[2026-03-12 22:48:14]  *** Contents of shared directory: ***
[2026-03-12 22:48:14] total 395284
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc 211995343 Mar 12 18:04 ATLAS.root_0
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc     15845 Mar 12 18:04 start_atlas.sh
[2026-03-12 22:48:14] -rw-r--r--. 2 boinc boinc    597526 Mar 12 18:04 input.tar.gz
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc 189308996 Mar 12 22:46 HITS.pool.root.1
[2026-03-12 22:48:14] -rw-------. 1 boinc boinc   2846720 Mar 12 22:48 result.tar.gz
22:48:16 (5223): run_atlas exited; CPU time 65677.102976
22:48:16 (5223): called boinc_finish(0)

</stderr_txt>
]]>

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