Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:28:32 (23164): wrapper (7.7.26015): starting
23:28:32 (23164): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 23:28:32] Arguments: --nthreads 12
[2026-03-11 23:28:32] Threads: 12
[2026-03-11 23:28:32] Checking for CVMFS
[2026-03-11 23:28:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 23:28:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 23:28:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 23:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 23:28:32] 2.11.2.0 2945 439782 98700 157181 1 50 11780506 20275200 1 130560 2 191105209 99.952 25564206 17913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 23:28:32] CVMFS is ok
[2026-03-11 23:28:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 23:28:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 23:28:32] Further information can be found at the LHC@home message board.
[2026-03-11 23:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 23:28:32] Checking for apptainer binary...
[2026-03-11 23:28:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 23:28:32] Running /usr/bin/apptainer --version
[2026-03-11 23:28:32] apptainer version 1.3.2-1.el7
[2026-03-11 23:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 23:28:34] c-205-2.aglt2.org
[2026-03-11 23:28:34] apptainer works
[2026-03-11 23:28:34] Set ATHENA_PROC_NUMBER=12
[2026-03-11 23:28:34] Set ATHENA_CORE_NUMBER=12
[2026-03-11 23:28:34] Starting ATLAS job with PandaID=7050366223
[2026-03-11 23:28:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 00:56:09]  *** The last 200 lines of the pilot log: ***
[2026-03-12 00:56:09]  is_tar=False
[2026-03-12 00:56:09]  lfn=log.48967085._012140.job.log.tgz.1
[2026-03-12 00:56:09]  mtime=0
[2026-03-12 00:56:09]  protocol_id=None
[2026-03-12 00:56:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 00:56:09]  replicas=None
[2026-03-12 00:56:09]  scope=mc23_13p6TeV
[2026-03-12 00:56:09]  status=None
[2026-03-12 00:56:09]  status_code=0
[2026-03-12 00:56:09]  storage_token=
[2026-03-12 00:56:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7050366223/log.48967085._012140.job.log.tgz.1
[2026-03-12 00:56:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/0a/log.48967085._012140.job.log.tgz.1
[2026-03-12 00:56:09]  workdir=None
[2026-03-12 00:56:09] ]
[2026-03-12 00:56:09] 2026-03-12 04:55:26,470 | INFO     | transferring file log.48967085._012140.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7050366223/log.48967085._012140.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-12 00:56:09] 2026-03-12 04:55:26,470 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7050366223/log.48967085._012140.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._012140.job
[2026-03-12 00:56:09] 2026-03-12 04:55:26,492 | INFO     | adding to output.list: log.48967085._012140.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/0a/log.48967085._012140.job.log.tg
[2026-03-12 00:56:09] 2026-03-12 04:55:26,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 00:56:09] 2026-03-12 04:55:26,493 | INFO     | summary of transferred files:
[2026-03-12 00:56:09] 2026-03-12 04:55:26,494 | INFO     |  -- lfn=log.48967085._012140.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 00:56:09] 2026-03-12 04:55:26,494 | INFO     | stage-out finished correctly
[2026-03-12 00:56:09] 2026-03-12 04:55:27,714 | INFO     | time since job start (5192s) is within the limit (345600.0s)
[2026-03-12 00:56:09] 2026-03-12 04:55:28,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 00:56:09] 2026-03-12 04:55:29,716 | INFO     | time since job start (5194s) is within the limit (345600.0s)
[2026-03-12 00:56:09] 2026-03-12 04:55:30,838 | INFO     | PID=27138 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,273 | WARNING  | process 31561 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 00:56:09] 2026-03-12 04:55:31,274 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050366223/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,362 | INFO     | number of running child processes to parent process 31561: 1
[2026-03-12 00:56:09] 2026-03-12 04:55:31,362 | INFO     | maximum number of monitored processes: 6
[2026-03-12 00:56:09] 2026-03-12 04:55:31,619 | INFO     | job 7050366223 has state=finished
[2026-03-12 00:56:09] 2026-03-12 04:55:31,619 | INFO     | preparing for final server update for job 7050366223 in state='finished'
[2026-03-12 00:56:09] 2026-03-12 04:55:31,619 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7050366223/jobReport.json
[2026-03-12 00:56:09] 2026-03-12 04:55:31,622 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 00:56:09] 2026-03-12 04:55:31,623 | INFO     | this job has now completed (state=finished)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,623 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,623 | INFO     | log transfer has been attempted: DONE
[2026-03-12 00:56:09] 2026-03-12 04:55:31,623 | INFO     | job 7050366223 has finished - writing final server update
[2026-03-12 00:56:09] 2026-03-12 04:55:31,624 | INFO     | total number of processed events: 400 (read)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,627 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050366223/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,627 | INFO     | extracted standard info from prmon json
[2026-03-12 00:56:09] 2026-03-12 04:55:31,627 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 00:56:09] 2026-03-12 04:55:31,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 00:56:09] 2026-03-12 04:55:31,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 00:56:09] 2026-03-12 04:55:31,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 00:56:09] 2026-03-12 04:55:31,630 | INFO     | fitting pss+swap vs Time
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | sum of square deviations: 147126479.5
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | sum of deviations: -9342209292.0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | mean x: 1773288812.5
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | mean y: 2798489.871794872
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | intersect: 112602755192.68372
[2026-03-12 00:56:09] 2026-03-12 04:55:31,631 | INFO     | chi2: 0.13285995041718177
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | current memory leak: -63.50 B/s (using 78 data points, chi2=0.13)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | ..............................
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | . Timing measurements:
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | . get job = 0 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,632 | INFO     | . initial setup = 7 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | . payload setup = 7 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | . stage-in = 0 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | . payload execution = 5167 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | . stage-out = 0 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | . log creation = 0 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,633 | INFO     | ..............................
[2026-03-12 00:56:09] 2026-03-12 04:55:31,712 | INFO     | 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,712 | INFO     | job summary report
[2026-03-12 00:56:09] 2026-03-12 04:55:31,712 | INFO     | --------------------------------------------------
[2026-03-12 00:56:09] 2026-03-12 04:55:31,712 | INFO     | PanDA job id: 7050366223
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | task id: 48967085
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | errors: (none)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | pilot state: finished 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | transexitcode: 0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,713 | INFO     | exeerrorcode: 0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | exeerrordiag: 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | exitcode: 0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | exitmsg: OK
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | cpuconsumptiontime: 55938 s
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | nevents: 400
[2026-03-12 00:56:09] 2026-03-12 04:55:31,714 | INFO     | neventsw: 0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | pid: 31561
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | pgrp: 31561
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | corecount: 12
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | event service: False
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | sizes: {0: 2280242, 11: 2280242, 5178: 2306607, 5180: 2315605, 5182: 2315661, 5185: 2315855}
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | --------------------------------------------------
[2026-03-12 00:56:09] 2026-03-12 04:55:31,715 | INFO     | 
[2026-03-12 00:56:09] 2026-03-12 04:55:31,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 00:56:09] 2026-03-12 04:55:31,741 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,741 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,741 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,741 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,744 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 00:56:09] 2026-03-12 04:55:31,744 | INFO     | job 7050366223 has completed (purged errors)
[2026-03-12 00:56:09] 2026-03-12 04:55:31,745 | INFO     | overall cleanup function is called
[2026-03-12 00:56:09] 2026-03-12 04:55:32,749 | INFO     | --- collectZombieJob: --- 10, [31561]
[2026-03-12 00:56:09] 2026-03-12 04:55:32,749 | INFO     | zombie collector waiting for pid 31561
[2026-03-12 00:56:09] 2026-03-12 04:55:32,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 00:56:09] 2026-03-12 04:55:32,749 | INFO     | collected zombie processes
[2026-03-12 00:56:09] 2026-03-12 04:55:32,749 | INFO     | will attempt to kill all subprocesses of pid=31561
[2026-03-12 00:56:09] 2026-03-12 04:55:32,843 | INFO     | process IDs to be killed: [31561] (in reverse order)
[2026-03-12 00:56:09] 2026-03-12 04:55:32,899 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 00:56:09] 2026-03-12 04:55:32,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 00:56:09] 2026-03-12 04:55:32,902 | INFO     | did not find any defunct processes belonging to 31561
[2026-03-12 00:56:09] 2026-03-12 04:55:32,906 | INFO     | did not find any defunct processes belonging to 31561
[2026-03-12 00:56:09] 2026-03-12 04:55:32,906 | INFO     | ready for new job
[2026-03-12 00:56:09] 2026-03-12 04:55:32,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 00:56:09] 2026-03-12 04:55:32,908 | INFO     | **************************************
[2026-03-12 00:56:09] 2026-03-12 04:55:32,908 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 00:56:09] 2026-03-12 04:55:32,908 | INFO     | **************************************
[2026-03-12 00:56:09] 2026-03-12 04:55:32,908 | INFO     | 
[2026-03-12 00:56:09] 2026-03-12 04:55:32,909 | INFO     | architecture information:
[2026-03-12 00:56:09] 2026-03-12 04:55:32,910 | INFO     | executing command: cat /etc/os-release
[2026-03-12 00:56:09] 2026-03-12 04:55:32,924 | INFO     | cat /etc/os-release:
[2026-03-12 00:56:09] NAME="CentOS Linux"
[2026-03-12 00:56:09] VERSION="7 (Core)"
[2026-03-12 00:56:09] ID="centos"
[2026-03-12 00:56:09] ID_LIKE="rhel fedora"
[2026-03-12 00:56:09] VERSION_ID="7"
[2026-03-12 00:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 00:56:09] ANSI_COLOR="0;31"
[2026-03-12 00:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 00:56:09] HOME_URL="https://www.centos.org/"
[2026-03-12 00:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 00:56:09] 
[2026-03-12 00:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 00:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 00:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 00:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 00:56:09] 
[2026-03-12 00:56:09] 2026-03-12 04:55:32,925 | INFO     | **************************************
[2026-03-12 00:56:09] 2026-03-12 04:55:33,427 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 00:56:09] 2026-03-12 04:55:33,445 | INFO     | sufficient remaining disk space (29409411072 B)
[2026-03-12 00:56:09] 2026-03-12 04:55:33,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 00:56:09] 2026-03-12 04:55:33,445 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 00:56:09] 2026-03-12 04:55:33,446 | INFO     | update_server=False
[2026-03-12 00:56:09] 2026-03-12 04:55:33,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 00:56:09] 2026-03-12 04:55:33,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:56:09] 2026-03-12 04:55:33,535 | INFO     | all job control threads have been joined
[2026-03-12 00:56:09] 2026-03-12 04:55:33,865 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 00:56:09] 2026-03-12 04:55:33,866 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 00:56:09] 2026-03-12 04:55:33,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:56:09] 2026-03-12 04:55:33,866 | INFO     | will abort loop
[2026-03-12 00:56:09] 2026-03-12 04:55:34,447 | INFO     | [job] retrieve thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,452 | INFO     | [job] queue monitor thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,541 | INFO     | [job] control thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,546 | INFO     | all data control threads have been joined
[2026-03-12 00:56:09] 2026-03-12 04:55:34,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 00:56:09] 2026-03-12 04:55:34,692 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,794 | INFO     | [data] copytool_in thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,871 | INFO     | [job] job monitor thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:34,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 00:56:09] 2026-03-12 04:55:34,913 | INFO     | all payload control threads have been joined
[2026-03-12 00:56:09] 2026-03-12 04:55:35,085 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,551 | INFO     | [data] control thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,640 | INFO     | [job] validate thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,654 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,766 | INFO     | [payload] validate_post thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,918 | INFO     | [payload] control thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:35,966 | INFO     | [payload] failed_post thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:36,594 | INFO     | [data] copytool_out thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:38,912 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:55:43,976 | INFO     | job.realtimelogging is not enabled
[2026-03-12 00:56:09] 2026-03-12 04:55:44,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 00:56:09] 2026-03-12 04:56:03,038 | INFO     | PID=27138 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 00:56:09] 2026-03-12 04:56:03,038 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 00:56:09] 2026-03-12 04:56:03,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 00:56:09] 2026-03-12 04:56:03,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 00:56:09] 2026-03-12 04:56:03,062 | INFO     | [monitor] cgroup control has ended
[2026-03-12 00:56:09] 2026-03-12 04:56:04,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837227755328)>', '<ExcThread(monitor, started 139836182738688)>']
[2026-03-12 00:56:09] 2026-03-12 04:56:05,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 00:56:09] 2026-03-12 04:56:05,049 | INFO     | [monitor] control thread has ended
[2026-03-12 00:56:09] 2026-03-12 04:56:09,388 | INFO     | all workflow threads have been joined
[2026-03-12 00:56:09] 2026-03-12 04:56:09,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 00:56:09] 2026-03-12 04:56:09,389 | INFO     | traces error code: 0
[2026-03-12 00:56:09] 2026-03-12 04:56:09,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 00:56:09] 2026-03-12 04:56:09,476 [wrapper] ==== pilot stdout END ====
[2026-03-12 00:56:09] 2026-03-12 04:56:09,480 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 00:56:09] 2026-03-12 04:56:09,484 [wrapper] pilotpid: 27138
[2026-03-12 00:56:09] 2026-03-12 04:56:09,488 [wrapper] Pilot exit status: 0
[2026-03-12 00:56:09] 2026-03-12 04:56:09,503 [wrapper] pandaids: 7050366223
[2026-03-12 00:56:09] 2026-03-12 04:56:09,543 [wrapper] cleanup supervisor_pilot 21182 27139
[2026-03-12 00:56:09] 2026-03-12 04:56:09,547 [wrapper] Test setup, not cleaning
[2026-03-12 00:56:09] 2026-03-12 04:56:09,551 [wrapper] apfmon messages muted
[2026-03-12 00:56:09] 2026-03-12 04:56:09,555 [wrapper] ==== wrapper stdout END ====
[2026-03-12 00:56:09] 2026-03-12 04:56:09,559 [wrapper] ==== wrapper stderr END ====
[2026-03-12 00:56:09]  *** Error codes and diagnostics ***
[2026-03-12 00:56:09]     "exeErrorCode": 0,
[2026-03-12 00:56:09]     "exeErrorDiag": "",
[2026-03-12 00:56:09]     "pilotErrorCode": 0,
[2026-03-12 00:56:09]     "pilotErrorDiag": "",
[2026-03-12 00:56:09]  *** Listing of results directory ***
[2026-03-12 00:56:09] total 408192
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 18:15 pilot3.tar.gz
[2026-03-12 00:56:09] -rwx------ 1 boincer umatlas     36322 Mar 11 18:16 runpilot2-wrapper.sh
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 18:17 queuedata.json
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas       100 Mar 11 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 00:56:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar 11 23:28 run_atlas
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas       105 Mar 11 23:28 job.xml
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas 213854197 Mar 11 23:28 EVNT.48967083._000502.pool.root.1
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas    597523 Mar 11 23:28 input.tar.gz
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 23:28 start_atlas.sh
[2026-03-12 00:56:09] drwxrwx--x 2 boincer umatlas      4096 Mar 11 23:28 shared
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas         0 Mar 11 23:28 boinc_lockfile
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas      2563 Mar 11 23:28 pandaJob.out
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas        57 Mar 11 23:28 setup.sh.local
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas   1006227 Mar 11 23:28 agis_schedconf.cvmfs.json
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas   1511578 Mar 11 23:28 agis_ddmendpoints.agis.ALL.json
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas       432 Mar 11 23:28 workernode_map.json
[2026-03-12 00:56:09] drwx------ 5 boincer umatlas      4096 Mar 11 23:28 pilot3
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas      5952 Mar 12 00:47 init_data.xml
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas 197879537 Mar 12 00:54 HITS.48967085._012140.pool.root.1
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas       530 Mar 12 00:55 boinc_task_state.xml
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas      1045 Mar 12 00:55 memory_monitor_summary.json
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas    407993 Mar 12 00:55 log.48967085._012140.job.log.tgz.1
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas      6408 Mar 12 00:55 heartbeat.json
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas      8192 Mar 12 00:55 boinc_mmap_file
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas        27 Mar 12 00:55 wrapper_checkpoint.txt
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas        95 Mar 12 00:56 pilot_heartbeat.json
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas      5000 Mar 12 00:56 pilotlog.txt
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas    748136 Mar 12 00:56 log.48967085._012140.job.log.1
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas       357 Mar 12 00:56 output.list
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas       620 Mar 12 00:56 runtime_log
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas   1177600 Mar 12 00:56 result.tar.gz
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas      9338 Mar 12 00:56 runtime_log.err
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas       658 Mar 12 00:56 4dsMDmo1gK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2ClLDmBxMjSm.diag
[2026-03-12 00:56:09] -rw-r--r-- 1 boincer umatlas     21636 Mar 12 00:56 stderr.txt
[2026-03-12 00:56:09] HITS file was successfully produced:
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas 197879537 Mar 12 00:54 shared/HITS.pool.root.1
[2026-03-12 00:56:09]  *** Contents of shared directory: ***
[2026-03-12 00:56:09] total 403844
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas 213854197 Mar 11 23:28 ATLAS.root_0
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas    597523 Mar 11 23:28 input.tar.gz
[2026-03-12 00:56:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 23:28 start_atlas.sh
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas 197879537 Mar 12 00:54 HITS.pool.root.1
[2026-03-12 00:56:09] -rw------- 1 boincer umatlas   1177600 Mar 12 00:56 result.tar.gz
00:56:10 (23164): run_atlas exited; CPU time 55923.960509
00:56:10 (23164): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN