Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:08:09 (3997964): wrapper (7.7.26015): starting
19:08:09 (3997964): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 19:08:09] Arguments: --nthreads 4
[2026-03-12 19:08:09] Threads: 4
[2026-03-12 19:08:09] Checking for CVMFS
[2026-03-12 19:08:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 19:08:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 19:08:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 19:08:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 19:08:10] 2.9.2.0 16149 21744 106356 157210 0 50 30429610 36864000 0 130560 0 11349585 99.986 823182 14331 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 19:08:10] CVMFS is ok
[2026-03-12 19:08:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 19:08:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 19:08:10] Further information can be found at the LHC@home message board.
[2026-03-12 19:08:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 19:08:10] Checking for apptainer binary...
[2026-03-12 19:08:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 19:08:10] Running /usr/bin/apptainer --version
[2026-03-12 19:08:10] apptainer version 1.4.1-1.1
[2026-03-12 19:08:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 19:08:10] thA369a
[2026-03-12 19:08:10] apptainer works
[2026-03-12 19:08:10] Set ATHENA_PROC_NUMBER=4
[2026-03-12 19:08:10] Set ATHENA_CORE_NUMBER=4
[2026-03-12 19:08:10] Starting ATLAS job with PandaID=7036925368
[2026-03-12 19:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:18:41]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | ready for new job
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | **************************************
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | **************************************
[2026-03-12 20:18:41] 2026-03-12 19:18:11,147 | INFO     | 
[2026-03-12 20:18:41] 2026-03-12 19:18:11,148 | INFO     | architecture information:
[2026-03-12 20:18:41] 2026-03-12 19:18:11,148 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:18:41] 2026-03-12 19:18:11,158 | INFO     | cat /etc/os-release:
[2026-03-12 20:18:41] NAME="CentOS Linux"
[2026-03-12 20:18:41] VERSION="7 (Core)"
[2026-03-12 20:18:41] ID="centos"
[2026-03-12 20:18:41] ID_LIKE="rhel fedora"
[2026-03-12 20:18:41] VERSION_ID="7"
[2026-03-12 20:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:18:41] ANSI_COLOR="0;31"
[2026-03-12 20:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:18:41] HOME_URL="https://www.centos.org/"
[2026-03-12 20:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:18:41] 
[2026-03-12 20:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:18:41] 
[2026-03-12 20:18:41] 2026-03-12 19:18:11,158 | INFO     | **************************************
[2026-03-12 20:18:41] 2026-03-12 19:18:11,661 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 20:18:41] 2026-03-12 19:18:11,675 | INFO     | sufficient remaining disk space (227039772672 B)
[2026-03-12 20:18:41] 2026-03-12 19:18:11,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:18:41] 2026-03-12 19:18:11,675 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:18:41] 2026-03-12 19:18:11,675 | INFO     | update_server=False
[2026-03-12 20:18:41] 2026-03-12 19:18:11,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:18:41] 2026-03-12 19:18:11,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:18:41] 2026-03-12 19:18:11,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:18:41] 2026-03-12 19:18:11,756 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 20:18:41] 2026-03-12 19:18:11,756 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 20:18:41] 2026-03-12 19:18:11,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:18:41] 2026-03-12 19:18:11,756 | INFO     | will abort loop
[2026-03-12 20:18:41] 2026-03-12 19:18:12,269 | INFO     | all data control threads have been joined
[2026-03-12 20:18:41] 2026-03-12 19:18:12,478 | INFO     | all job control threads have been joined
[2026-03-12 20:18:41] 2026-03-12 19:18:12,681 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:12,681 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:12,709 | INFO     | all payload control threads have been joined
[2026-03-12 20:18:41] 2026-03-12 19:18:12,762 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:12,774 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,238 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,274 | INFO     | [data] control thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,281 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,481 | INFO     | [job] control thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,682 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,715 | INFO     | [payload] control thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:13,812 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:14,060 | INFO     | [job] validate thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:14,140 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:14,181 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:14,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:18:41] 2026-03-12 19:18:14,582 | INFO     | job.realtimelogging is not enabled
[2026-03-12 20:18:41] 2026-03-12 19:18:15,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:18,344 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:18:41] 2026-03-12 19:18:26,132 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:18:41] 2026-03-12 19:18:26,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830015956800)>', '<ExcThread(monitor, started 139829236987648)>']
[2026-03-12 20:18:41] 2026-03-12 19:18:31,545 | INFO     | all workflow threads have been joined
[2026-03-12 20:18:41] 2026-03-12 19:18:31,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:18:41] 2026-03-12 19:18:31,546 | INFO     | traces error code: 0
[2026-03-12 20:18:41] 2026-03-12 19:18:31,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:18:41] 2026-03-12 19:18:41,457 | INFO     | PID=4002068 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 20:18:41] 2026-03-12 19:18:41,458 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:18:41] 2026-03-12 19:18:41,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:18:41] 2026-03-12 19:18:41,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:18:41] 2026-03-12 19:18:41,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:18:41] 2026-03-12 19:18:41,458 | INFO     | [monitor] control thread has ended
[2026-03-12 20:18:41] 2026-03-12 19:18:41,508 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:18:41] 2026-03-12 19:18:41,511 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:18:41] 2026-03-12 19:18:41,513 [wrapper] pilotpid: 4002068
[2026-03-12 20:18:41] 2026-03-12 19:18:41,516 [wrapper] Pilot exit status: 0
[2026-03-12 20:18:41] 2026-03-12 19:18:41,524 [wrapper] pandaids: 7036925368
[2026-03-12 20:18:41] 2026-03-12 19:18:41,541 [wrapper] cleanup supervisor_pilot 4011691 4002069
[2026-03-12 20:18:41] 2026-03-12 19:18:41,544 [wrapper] Test setup, not cleaning
[2026-03-12 20:18:41] 2026-03-12 19:18:41,546 [wrapper] apfmon messages muted
[2026-03-12 20:18:41] 2026-03-12 19:18:41,549 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:18:41] 2026-03-12 19:18:41,552 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:18:41]  *** Error codes and diagnostics ***
[2026-03-12 20:18:41]     "exeErrorCode": 0,
[2026-03-12 20:18:41]     "exeErrorDiag": "",
[2026-03-12 20:18:41]     "pilotErrorCode": 0,
[2026-03-12 20:18:41]     "pilotErrorDiag": "",
[2026-03-12 20:18:41]  *** Listing of results directory ***
[2026-03-12 20:18:41] total 489764
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc    584627 Mar  4 01:25 pilot3.tar.gz
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      5111 Mar  4 01:29 queuedata.json
[2026-03-12 20:18:41] -rwx------ 1 boinc boinc     36322 Mar  4 01:29 runpilot2-wrapper.sh
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc       100 Mar 12 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:18:41] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 19:08 run_atlas
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc       105 Mar 12 19:08 job.xml
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc 284191740 Mar 12 19:08 EVNT.48343768._000126.pool.root.1
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc    597959 Mar 12 19:08 input.tar.gz
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc     15845 Mar 12 19:08 start_atlas.sh
[2026-03-12 20:18:41] drwxrwx--x 2 boinc boinc      4096 Mar 12 19:08 shared
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc         0 Mar 12 19:08 boinc_setup_complete
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      6443 Mar 12 19:08 init_data.xml
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc         0 Mar 12 19:08 boinc_lockfile
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      2564 Mar 12 19:08 pandaJob.out
[2026-03-12 20:18:41] -rw------- 1 boinc boinc   1006522 Mar 12 19:08 agis_schedconf.cvmfs.json
[2026-03-12 20:18:41] -rw------- 1 boinc boinc   1511578 Mar 12 19:08 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:18:41] -rw------- 1 boinc boinc       418 Mar 12 19:08 workernode_map.json
[2026-03-12 20:18:41] drwx------ 5 boinc boinc      4096 Mar 12 19:08 pilot3
[2026-03-12 20:18:41] -rw------- 1 boinc boinc 211656893 Mar 12 20:17 HITS.48838605._003254.pool.root.1
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc       529 Mar 12 20:17 boinc_task_state.xml
[2026-03-12 20:18:41] -rw------- 1 boinc boinc      1016 Mar 12 20:18 memory_monitor_summary.json
[2026-03-12 20:18:41] -rw------- 1 boinc boinc    246687 Mar 12 20:18 log.48838605._003254.job.log.tgz.1
[2026-03-12 20:18:41] -rw------- 1 boinc boinc      6301 Mar 12 20:18 heartbeat.json
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      8192 Mar 12 20:18 boinc_mmap_file
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc        27 Mar 12 20:18 wrapper_checkpoint.txt
[2026-03-12 20:18:41] -rw------- 1 boinc boinc       747 Mar 12 20:18 pilotlog.txt
[2026-03-12 20:18:41] -rw------- 1 boinc boinc        95 Mar 12 20:18 pilot_heartbeat.json
[2026-03-12 20:18:41] -rw------- 1 boinc boinc    623040 Mar 12 20:18 log.48838605._003254.job.log.1
[2026-03-12 20:18:41] -rw------- 1 boinc boinc       357 Mar 12 20:18 output.list
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc       620 Mar 12 20:18 runtime_log
[2026-03-12 20:18:41] -rw------- 1 boinc boinc    890880 Mar 12 20:18 result.tar.gz
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      8901 Mar 12 20:18 runtime_log.err
[2026-03-12 20:18:41] -rw------- 1 boinc boinc       658 Mar 12 20:18 cteNDmIIpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGTILDmm17xnm.diag
[2026-03-12 20:18:41] -rw-r--r-- 1 boinc boinc      9849 Mar 12 20:18 stderr.txt
[2026-03-12 20:18:41] HITS file was successfully produced:
[2026-03-12 20:18:41] -rw------- 1 boinc boinc 211656893 Mar 12 20:17 shared/HITS.pool.root.1
[2026-03-12 20:18:41]  *** Contents of shared directory: ***
[2026-03-12 20:18:41] total 485712
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc 284191740 Mar 12 19:08 ATLAS.root_0
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc    597959 Mar 12 19:08 input.tar.gz
[2026-03-12 20:18:41] -rw-r--r-- 2 boinc boinc     15845 Mar 12 19:08 start_atlas.sh
[2026-03-12 20:18:41] -rw------- 1 boinc boinc 211656893 Mar 12 20:17 HITS.pool.root.1
[2026-03-12 20:18:41] -rw------- 1 boinc boinc    890880 Mar 12 20:18 result.tar.gz
20:18:43 (3997964): run_atlas exited; CPU time 15718.992599
20:18:43 (3997964): called boinc_finish(0)

</stderr_txt>
]]>

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