Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:19:21 (3424245): wrapper (7.7.26015): starting
16:19:21 (3424245): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 16:19:21] Arguments: --nthreads 3
[2026-03-12 16:19:21] Threads: 3
[2026-03-12 16:19:21] Checking for CVMFS
[2026-03-12 16:19:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 16:19:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 16:19:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 16:19:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 16:19:22] 2.9.2.0 3281840 1195 65116 157205 0 49 35248811 36864001 0 130560 0 399938 99.977 49234 19352 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 16:19:22] CVMFS is ok
[2026-03-12 16:19:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 16:19:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 16:19:22] Further information can be found at the LHC@home message board.
[2026-03-12 16:19:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 16:19:22] Checking for apptainer binary...
[2026-03-12 16:19:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 16:19:22] Running /usr/bin/apptainer --version
[2026-03-12 16:19:22] apptainer version 1.4.1-1.1
[2026-03-12 16:19:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 16:19:22] thA389a
[2026-03-12 16:19:22] apptainer works
[2026-03-12 16:19:22] Set ATHENA_PROC_NUMBER=3
[2026-03-12 16:19:22] Set ATHENA_CORE_NUMBER=3
[2026-03-12 16:19:22] Starting ATLAS job with PandaID=7036847489
[2026-03-12 16:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:06:06]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:06:06] ID="centos"
[2026-03-12 18:06:06] ID_LIKE="rhel fedora"
[2026-03-12 18:06:06] VERSION_ID="7"
[2026-03-12 18:06:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:06:06] ANSI_COLOR="0;31"
[2026-03-12 18:06:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:06:06] HOME_URL="https://www.centos.org/"
[2026-03-12 18:06:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:06:06] 
[2026-03-12 18:06:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:06:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:06:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:06:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:06:06] 
[2026-03-12 18:06:06] 2026-03-12 17:05:34,919 | INFO     | **************************************
[2026-03-12 18:06:06] 2026-03-12 17:05:35,423 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-12 18:06:06] 2026-03-12 17:05:35,436 | INFO     | sufficient remaining disk space (224351223808 B)
[2026-03-12 18:06:06] 2026-03-12 17:05:35,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:06:06] 2026-03-12 17:05:35,437 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:06:06] 2026-03-12 17:05:35,437 | INFO     | update_server=False
[2026-03-12 18:06:06] 2026-03-12 17:05:35,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:06:06] 2026-03-12 17:05:35,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:06:06] 2026-03-12 17:05:35,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:06:06] 2026-03-12 17:05:35,602 | INFO     | all payload control threads have been joined
[2026-03-12 18:06:06] 2026-03-12 17:05:35,870 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 18:06:06] 2026-03-12 17:05:35,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 18:06:06] 2026-03-12 17:05:35,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:06:06] 2026-03-12 17:05:35,871 | INFO     | will abort loop
[2026-03-12 18:06:06] 2026-03-12 17:05:36,005 | INFO     | all data control threads have been joined
[2026-03-12 18:06:06] 2026-03-12 17:05:36,442 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:36,443 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:36,547 | INFO     | all job control threads have been joined
[2026-03-12 18:06:06] 2026-03-12 17:05:36,591 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:36,607 | INFO     | [payload] control thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:36,675 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:36,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:06:06] 2026-03-12 17:05:36,876 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,010 | INFO     | [data] control thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,289 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,510 | INFO     | [job] validate thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,518 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,552 | INFO     | [job] control thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,634 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:37,948 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:38,682 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:39,443 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:45,464 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:06:06] 2026-03-12 17:05:45,981 | INFO     | job.realtimelogging is not enabled
[2026-03-12 18:06:06] 2026-03-12 17:05:46,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:06:06] 2026-03-12 17:05:48,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871266871104)>', '<ExcThread(monitor, started 139870609585920)>']
[2026-03-12 18:06:06] 2026-03-12 17:05:53,407 | INFO     | all workflow threads have been joined
[2026-03-12 18:06:06] 2026-03-12 17:05:53,408 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:06:06] 2026-03-12 17:05:53,408 | INFO     | traces error code: 0
[2026-03-12 18:06:06] 2026-03-12 17:05:53,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:06:06] 2026-03-12 17:06:06,274 | INFO     | PID=3428287 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 18:06:06] 2026-03-12 17:06:06,275 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:06:06] 2026-03-12 17:06:06,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:06:06] 2026-03-12 17:06:06,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:06:06] 2026-03-12 17:06:06,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:06:06] 2026-03-12 17:06:06,275 | INFO     | [monitor] control thread has ended
[2026-03-12 18:06:06] 2026-03-12 17:06:06,319 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:06:06] 2026-03-12 17:06:06,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:06:06] 2026-03-12 17:06:06,325 [wrapper] pilotpid: 3428287
[2026-03-12 18:06:06] 2026-03-12 17:06:06,327 [wrapper] Pilot exit status: 0
[2026-03-12 18:06:06] 2026-03-12 17:06:06,336 [wrapper] pandaids: 7036847489
[2026-03-12 18:06:06] 2026-03-12 17:06:06,353 [wrapper] cleanup supervisor_pilot 3438511 3428288
[2026-03-12 18:06:06] 2026-03-12 17:06:06,356 [wrapper] Test setup, not cleaning
[2026-03-12 18:06:06] 2026-03-12 17:06:06,359 [wrapper] apfmon messages muted
[2026-03-12 18:06:06] 2026-03-12 17:06:06,361 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:06:06] 2026-03-12 17:06:06,364 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:06:06]  *** Error codes and diagnostics ***
[2026-03-12 18:06:06]     "exeErrorCode": 0,
[2026-03-12 18:06:06]     "exeErrorDiag": "",
[2026-03-12 18:06:06]     "pilotErrorCode": 0,
[2026-03-12 18:06:06]     "pilotErrorDiag": "",
[2026-03-12 18:06:06]  *** Listing of results directory ***
[2026-03-12 18:06:06] total 513948
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc    584627 Mar  4 01:25 pilot3.tar.gz
[2026-03-12 18:06:06] -rwx------ 1 boinc boinc     36322 Mar  4 01:31 runpilot2-wrapper.sh
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      5111 Mar  4 01:33 queuedata.json
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc       100 Mar 12 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:06:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 16:19 run_atlas
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc       105 Mar 12 16:19 job.xml
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc 290518008 Mar 12 16:19 EVNT.48220197._000322.pool.root.1
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc    597967 Mar 12 16:19 input.tar.gz
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc     15845 Mar 12 16:19 start_atlas.sh
[2026-03-12 18:06:06] drwxrwx--x 2 boinc boinc      4096 Mar 12 16:19 shared
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc         0 Mar 12 16:19 boinc_setup_complete
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      6197 Mar 12 16:19 init_data.xml
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc         0 Mar 12 16:19 boinc_lockfile
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      2566 Mar 12 16:19 pandaJob.out
[2026-03-12 18:06:06] -rw------- 1 boinc boinc   1006536 Mar 12 16:19 agis_schedconf.cvmfs.json
[2026-03-12 18:06:06] -rw------- 1 boinc boinc   1511578 Mar 12 16:19 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:06:06] -rw------- 1 boinc boinc       427 Mar 12 16:19 workernode_map.json
[2026-03-12 18:06:06] drwx------ 5 boinc boinc      4096 Mar 12 16:19 pilot3
[2026-03-12 18:06:06] -rw------- 1 boinc boinc 229485988 Mar 12 18:05 HITS.48838577._008103.pool.root.1
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc       529 Mar 12 18:05 boinc_task_state.xml
[2026-03-12 18:06:06] -rw------- 1 boinc boinc      1022 Mar 12 18:05 memory_monitor_summary.json
[2026-03-12 18:06:06] -rw------- 1 boinc boinc    261608 Mar 12 18:05 log.48838577._008103.job.log.tgz.1
[2026-03-12 18:06:06] -rw------- 1 boinc boinc      6314 Mar 12 18:05 heartbeat.json
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc        27 Mar 12 18:05 wrapper_checkpoint.txt
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      8192 Mar 12 18:05 boinc_mmap_file
[2026-03-12 18:06:06] -rw------- 1 boinc boinc       747 Mar 12 18:06 pilotlog.txt
[2026-03-12 18:06:06] -rw------- 1 boinc boinc        95 Mar 12 18:06 pilot_heartbeat.json
[2026-03-12 18:06:06] -rw------- 1 boinc boinc    919074 Mar 12 18:06 log.48838577._008103.job.log.1
[2026-03-12 18:06:06] -rw------- 1 boinc boinc       357 Mar 12 18:06 output.list
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc       620 Mar 12 18:06 runtime_log
[2026-03-12 18:06:06] -rw------- 1 boinc boinc   1198080 Mar 12 18:06 result.tar.gz
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      8901 Mar 12 18:06 runtime_log.err
[2026-03-12 18:06:06] -rw------- 1 boinc boinc       659 Mar 12 18:06 cA7NDmFKpH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhbGLDmRT9U6n.diag
[2026-03-12 18:06:06] -rw-r--r-- 1 boinc boinc      8947 Mar 12 18:06 stderr.txt
[2026-03-12 18:06:06] HITS file was successfully produced:
[2026-03-12 18:06:06] -rw------- 1 boinc boinc 229485988 Mar 12 18:05 shared/HITS.pool.root.1
[2026-03-12 18:06:06]  *** Contents of shared directory: ***
[2026-03-12 18:06:06] total 509596
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc 290518008 Mar 12 16:19 ATLAS.root_0
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc    597967 Mar 12 16:19 input.tar.gz
[2026-03-12 18:06:06] -rw-r--r-- 2 boinc boinc     15845 Mar 12 16:19 start_atlas.sh
[2026-03-12 18:06:06] -rw------- 1 boinc boinc 229485988 Mar 12 18:05 HITS.pool.root.1
[2026-03-12 18:06:06] -rw------- 1 boinc boinc   1198080 Mar 12 18:06 result.tar.gz
18:06:07 (3424245): run_atlas exited; CPU time 18330.023208
18:06:07 (3424245): called boinc_finish(0)

</stderr_txt>
]]>

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