Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:37 (713842): wrapper (7.7.26015): starting
23:12:37 (713842): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 23:12:37] Arguments: --nthreads 4
[2026-03-11 23:12:37] Threads: 4
[2026-03-11 23:12:37] Checking for CVMFS
[2026-03-11 23:12:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 23:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 23:12:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 23:12:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 23:12:39] 2.13.3.0 7459 2414 50736 157180 1 9 9915997 102400000 2748 130560 0 1839662 99.982 221683 2163 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 23:12:39] CVMFS is ok
[2026-03-11 23:12:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 23:12:39] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 23:12:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 23:12:39] Further information can be found at the LHC@home message board.
[2026-03-11 23:12:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 23:12:39] Checking for apptainer binary...
[2026-03-11 23:12:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 23:12:39] Running /usr/bin/apptainer --version
[2026-03-11 23:12:39] apptainer version 1.4.5
[2026-03-11 23:12:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 23:12:40] T7810-Ubuntu
[2026-03-11 23:12:40] apptainer works
[2026-03-11 23:12:40] Set ATHENA_PROC_NUMBER=4
[2026-03-11 23:12:40] Set ATHENA_CORE_NUMBER=4
[2026-03-11 23:12:40] Starting ATLAS job with PandaID=7036942397
[2026-03-11 23:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 06:47:49]  *** The last 200 lines of the pilot log: ***
[2026-03-12 06:47:49] 2026-03-12 10:47:11,000 | INFO     | total number of processed events: 400 (read)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,015 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7036942397/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,016 | INFO     | extracted standard info from prmon json
[2026-03-12 06:47:49] 2026-03-12 10:47:11,016 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 06:47:49] 2026-03-12 10:47:11,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 06:47:49] 2026-03-12 10:47:11,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 06:47:49] 2026-03-12 10:47:11,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 06:47:49] 2026-03-12 10:47:11,025 | INFO     | fitting pss+swap vs Time
[2026-03-12 06:47:49] 2026-03-12 10:47:11,026 | INFO     | sum of square deviations: 27694837408.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,032 | INFO     | sum of deviations: 677896660.0000038
[2026-03-12 06:47:49] 2026-03-12 10:47:11,032 | INFO     | mean x: 1773298804.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,033 | INFO     | mean y: 2319194.0939597315
[2026-03-12 06:47:49] 2026-03-12 10:47:11,033 | INFO     | intersect: -41086489.019614205
[2026-03-12 06:47:49] 2026-03-12 10:47:11,033 | INFO     | chi2: 1.9929525722477202
[2026-03-12 06:47:49] 2026-03-12 10:47:11,034 | INFO     | sum of square deviations: 26775834130.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,040 | INFO     | sum of deviations: 26233191977.500008
[2026-03-12 06:47:49] 2026-03-12 10:47:11,040 | INFO     | mean x: 1773298651.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,040 | INFO     | mean y: 2323396.278280543
[2026-03-12 06:47:49] 2026-03-12 10:47:11,040 | INFO     | intersect: -1735037379.5435221
[2026-03-12 06:47:49] 2026-03-12 10:47:11,041 | INFO     | chi2: 1.326282717673581
[2026-03-12 06:47:49] 2026-03-12 10:47:11,041 | INFO     | current chi2=1.326282717673581 (change=33.45136577044812 %)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,042 | INFO     | sum of square deviations: 25877389378.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,047 | INFO     | sum of deviations: 25819908651.000004
[2026-03-12 06:47:49] 2026-03-12 10:47:11,048 | INFO     | mean x: 1773298499.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,048 | INFO     | mean y: 2323326.1258581234
[2026-03-12 06:47:49] 2026-03-12 10:47:11,048 | INFO     | intersect: -1767036194.1223989
[2026-03-12 06:47:49] 2026-03-12 10:47:11,049 | INFO     | chi2: 1.326416643153056
[2026-03-12 06:47:49] 2026-03-12 10:47:11,049 | INFO     | current chi2=1.326416643153056 (change=-0.01009780778188166 %)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,049 | INFO     | right removable region: 436
[2026-03-12 06:47:49] 2026-03-12 10:47:11,050 | INFO     | sum of square deviations: 26775834130.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,055 | INFO     | sum of deviations: -45466214854.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,055 | INFO     | mean x: 1773298956.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,056 | INFO     | mean y: 2326788.86199095
[2026-03-12 06:47:49] 2026-03-12 10:47:11,056 | INFO     | intersect: 3013444611.1691794
[2026-03-12 06:47:49] 2026-03-12 10:47:11,056 | INFO     | chi2: 0.746625508637885
[2026-03-12 06:47:49] 2026-03-12 10:47:11,057 | INFO     | current chi2=0.746625508637885 (change=62.536714669741734 %)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,057 | INFO     | sum of square deviations: 25877389378.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,063 | INFO     | sum of deviations: -56629654390.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,063 | INFO     | mean x: 1773299109.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,063 | INFO     | mean y: 2328678.8832951947
[2026-03-12 06:47:49] 2026-03-12 10:47:11,063 | INFO     | intersect: 3882987357.6192355
[2026-03-12 06:47:49] 2026-03-12 10:47:11,064 | INFO     | chi2: 0.7078625588577686
[2026-03-12 06:47:49] 2026-03-12 10:47:11,064 | INFO     | current chi2=0.7078625588577686 (change=5.1917526700680305 %)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,064 | INFO     | left removable region: 20
[2026-03-12 06:47:49] 2026-03-12 10:47:11,065 | INFO     | sum of square deviations: 22323172040.0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,070 | INFO     | sum of deviations: -25877184570.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,070 | INFO     | mean x: 1773299078.5
[2026-03-12 06:47:49] 2026-03-12 10:47:11,070 | INFO     | mean y: 2332238.6610576925
[2026-03-12 06:47:49] 2026-03-12 10:47:11,070 | INFO     | intersect: 2057953521.8199751
[2026-03-12 06:47:49] 2026-03-12 10:47:11,071 | INFO     | chi2: 0.03267621645208758
[2026-03-12 06:47:49] 2026-03-12 10:47:11,071 | INFO     | current memory leak: -1.16 B/s (using 416 data points, chi2=0.03)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,072 | INFO     | could have reported an average CPU frequency of 2683 MHz (19 samples)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,072 | INFO     | ..............................
[2026-03-12 06:47:49] 2026-03-12 10:47:11,072 | INFO     | . Timing measurements:
[2026-03-12 06:47:49] 2026-03-12 10:47:11,072 | INFO     | . get job = 0 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,072 | INFO     | . initial setup = 7 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | . payload setup = 6 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | . stage-in = 0 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | . payload execution = 27223 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | . stage-out = 3 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | . log creation = 0 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,073 | INFO     | ..............................
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | 
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | job summary report
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | --------------------------------------------------
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | PanDA job id: 7036942397
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | task id: 48842912
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | errors: (none)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,415 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | pilot state: finished 
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | transexitcode: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | exeerrorcode: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | exeerrordiag: 
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | exitcode: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | exitmsg: OK
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | cpuconsumptiontime: 106618 s
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | nevents: 400
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | neventsw: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | pid: 722984
[2026-03-12 06:47:49] 2026-03-12 10:47:11,416 | INFO     | pgrp: 722984
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | corecount: 4
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | event service: False
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | sizes: {0: 2279776, 1: 2280237, 11: 2280237, 27233: 2316846, 27237: 2325872, 27238: 2325928, 27241: 2326250}
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | --------------------------------------------------
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | 
[2026-03-12 06:47:49] 2026-03-12 10:47:11,417 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-12 06:47:49] 2026-03-12 10:47:11,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,440 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 06:47:49] 2026-03-12 10:47:11,443 | INFO     | job 7036942397 has completed (purged errors)
[2026-03-12 06:47:49] 2026-03-12 10:47:11,443 | INFO     | overall cleanup function is called
[2026-03-12 06:47:49] 2026-03-12 10:47:12,299 | INFO     | PID=718215 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 06:47:49] 2026-03-12 10:47:12,299 | INFO     | .. there are 4 such processes running
[2026-03-12 06:47:49] 2026-03-12 10:47:12,451 | INFO     | --- collectZombieJob: --- 10, [722984]
[2026-03-12 06:47:49] 2026-03-12 10:47:12,451 | INFO     | zombie collector waiting for pid 722984
[2026-03-12 06:47:49] 2026-03-12 10:47:12,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 06:47:49] 2026-03-12 10:47:12,451 | INFO     | collected zombie processes
[2026-03-12 06:47:49] 2026-03-12 10:47:12,451 | INFO     | will attempt to kill all subprocesses of pid=722984
[2026-03-12 06:47:49] 2026-03-12 10:47:12,800 | INFO     | process IDs to be killed: [722984] (in reverse order)
[2026-03-12 06:47:49] 2026-03-12 10:47:12,892 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 06:47:49] 2026-03-12 10:47:12,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 06:47:49] 2026-03-12 10:47:12,901 | INFO     | did not find any defunct processes belonging to 722984
[2026-03-12 06:47:49] 2026-03-12 10:47:12,910 | INFO     | did not find any defunct processes belonging to 722984
[2026-03-12 06:47:49] 2026-03-12 10:47:12,910 | INFO     | ready for new job
[2026-03-12 06:47:49] 2026-03-12 10:47:12,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 06:47:49] 2026-03-12 10:47:12,913 | INFO     | **************************************
[2026-03-12 06:47:49] 2026-03-12 10:47:12,914 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 06:47:49] 2026-03-12 10:47:12,914 | INFO     | **************************************
[2026-03-12 06:47:49] 2026-03-12 10:47:12,914 | INFO     | 
[2026-03-12 06:47:49] 2026-03-12 10:47:12,918 | INFO     | architecture information:
[2026-03-12 06:47:49] 2026-03-12 10:47:12,918 | INFO     | executing command: cat /etc/os-release
[2026-03-12 06:47:49] 2026-03-12 10:47:12,940 | INFO     | cat /etc/os-release:
[2026-03-12 06:47:49] NAME="CentOS Linux"
[2026-03-12 06:47:49] VERSION="7 (Core)"
[2026-03-12 06:47:49] ID="centos"
[2026-03-12 06:47:49] ID_LIKE="rhel fedora"
[2026-03-12 06:47:49] VERSION_ID="7"
[2026-03-12 06:47:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 06:47:49] ANSI_COLOR="0;31"
[2026-03-12 06:47:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 06:47:49] HOME_URL="https://www.centos.org/"
[2026-03-12 06:47:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 06:47:49] 
[2026-03-12 06:47:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 06:47:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 06:47:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 06:47:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 06:47:49] 
[2026-03-12 06:47:49] 2026-03-12 10:47:12,940 | INFO     | **************************************
[2026-03-12 06:47:49] 2026-03-12 10:47:13,443 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-12 06:47:49] 2026-03-12 10:47:13,461 | INFO     | sufficient remaining disk space (399361703936 B)
[2026-03-12 06:47:49] 2026-03-12 10:47:13,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 06:47:49] 2026-03-12 10:47:13,462 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 06:47:49] 2026-03-12 10:47:13,462 | INFO     | update_server=False
[2026-03-12 06:47:49] 2026-03-12 10:47:13,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 06:47:49] 2026-03-12 10:47:13,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:47:49] 2026-03-12 10:47:13,464 | INFO     | aborting loop
[2026-03-12 06:47:49] 2026-03-12 10:47:13,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 06:47:49] 2026-03-12 10:47:13,701 | INFO     | all data control threads have been joined
[2026-03-12 06:47:49] 2026-03-12 10:47:14,144 | INFO     | all job control threads have been joined
[2026-03-12 06:47:49] 2026-03-12 10:47:14,210 | INFO     | all payload control threads have been joined
[2026-03-12 06:47:49] 2026-03-12 10:47:14,468 | INFO     | [job] retrieve thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,469 | INFO     | [job] job monitor thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 06:47:49] 2026-03-12 10:47:14,547 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,640 | INFO     | [data] copytool_in thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,651 | INFO     | [payload] failed_post thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,706 | INFO     | [data] control thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:14,803 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,149 | INFO     | [job] control thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,215 | INFO     | [payload] control thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,457 | INFO     | [job] validate thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,469 | INFO     | [data] copytool_out thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,596 | INFO     | [payload] validate_post thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:15,750 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:16,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:47:49] 2026-03-12 10:47:17,190 | INFO     | [job] queue monitor thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:18,482 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:23,558 | INFO     | job.realtimelogging is not enabled
[2026-03-12 06:47:49] 2026-03-12 10:47:24,563 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 06:47:49] 2026-03-12 10:47:42,836 | INFO     | [monitor] cgroup control has ended
[2026-03-12 06:47:49] 2026-03-12 10:47:44,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135267079579456)>', '<ExcThread(monitor, started 135266505324288)>']
[2026-03-12 06:47:49] 2026-03-12 10:47:44,822 | INFO     | PID=718215 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 06:47:49] 2026-03-12 10:47:44,823 | INFO     | .. there are 4 such processes running
[2026-03-12 06:47:49] 2026-03-12 10:47:44,824 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 06:47:49] 2026-03-12 10:47:44,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 06:47:49] 2026-03-12 10:47:44,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 06:47:49] 2026-03-12 10:47:44,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 06:47:49] 2026-03-12 10:47:44,824 | INFO     | [monitor] control thread has ended
[2026-03-12 06:47:49] 2026-03-12 10:47:49,424 | INFO     | all workflow threads have been joined
[2026-03-12 06:47:49] 2026-03-12 10:47:49,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 06:47:49] 2026-03-12 10:47:49,425 | INFO     | traces error code: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:49,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 06:47:49] 2026-03-12 10:47:49,575 [wrapper] ==== pilot stdout END ====
[2026-03-12 06:47:49] 2026-03-12 10:47:49,578 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 06:47:49] 2026-03-12 10:47:49,580 [wrapper] pilotpid: 718215
[2026-03-12 06:47:49] 2026-03-12 10:47:49,583 [wrapper] Pilot exit status: 0
[2026-03-12 06:47:49] 2026-03-12 10:47:49,599 [wrapper] pandaids: 7036942397
[2026-03-12 06:47:49] 2026-03-12 10:47:49,659 [wrapper] cleanup supervisor_pilot  800455 718216
[2026-03-12 06:47:49] 2026-03-12 10:47:49,662 [wrapper] Test setup, not cleaning
[2026-03-12 06:47:49] 2026-03-12 10:47:49,665 [wrapper] apfmon messages muted
[2026-03-12 06:47:49] 2026-03-12 10:47:49,667 [wrapper] ==== wrapper stdout END ====
[2026-03-12 06:47:49] 2026-03-12 10:47:49,673 [wrapper] ==== wrapper stderr END ====
[2026-03-12 06:47:49]  *** Error codes and diagnostics ***
[2026-03-12 06:47:49]     "exeErrorCode": 0,
[2026-03-12 06:47:49]     "exeErrorDiag": "",
[2026-03-12 06:47:49]     "pilotErrorCode": 0,
[2026-03-12 06:47:49]     "pilotErrorDiag": "",
[2026-03-12 06:47:49]  *** Listing of results directory ***
[2026-03-12 06:47:49] total 429612
[2026-03-12 06:47:49] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  3 19:25 pilot3.tar.gz
[2026-03-12 06:47:49] -rwx------ 1 whitlerd whitlerd     36322 Mar  3 19:32 runpilot2-wrapper.sh
[2026-03-12 06:47:49] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  3 19:33 queuedata.json
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 11 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 06:47:49] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 11 23:12 run_atlas
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 11 23:12 job.xml
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd 226029365 Mar 11 23:12 EVNT.48449655._000003.pool.root.1
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 23:12 start_atlas.sh
[2026-03-12 06:47:49] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 11 23:12 shared
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd    597967 Mar 11 23:12 input.tar.gz
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd      9126 Mar 11 23:12 init_data.xml
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 23:12 boinc_setup_complete
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 23:12 boinc_lockfile
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd      2608 Mar 11 23:12 pandaJob.out
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd   1006235 Mar 11 23:12 agis_schedconf.cvmfs.json
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd       434 Mar 11 23:12 workernode_map.json
[2026-03-12 06:47:49] drwx------ 5 whitlerd whitlerd      4096 Mar 11 23:12 pilot3
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd       532 Mar 12 06:46 boinc_task_state.xml
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd 201104241 Mar 12 06:46 HITS.48842912._000080.pool.root.1
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd      1028 Mar 12 06:47 memory_monitor_summary.json
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd   1511578 Mar 12 06:47 agis_ddmendpoints.agis.ALL.json
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd    591008 Mar 12 06:47 log.48842912._000080.job.log.tgz.1
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd      6336 Mar 12 06:47 heartbeat.json
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd        95 Mar 12 06:47 pilot_heartbeat.json
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 12 06:47 boinc_mmap_file
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 12 06:47 wrapper_checkpoint.txt
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd      4905 Mar 12 06:47 pilotlog.txt
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd   3833539 Mar 12 06:47 log.48842912._000080.job.log.1
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd       357 Mar 12 06:47 output.list
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 12 06:47 runtime_log
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd   4444160 Mar 12 06:47 result.tar.gz
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd      9020 Mar 12 06:47 runtime_log.err
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd       653 Mar 12 06:47 pPaLDmZLpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQbILDmQpeFVn.diag
[2026-03-12 06:47:49] -rw-rw-r-- 1 whitlerd whitlerd     21230 Mar 12 06:47 stderr.txt
[2026-03-12 06:47:49] HITS file was successfully produced:
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd 201104241 Mar 12 06:46 shared/HITS.pool.root.1
[2026-03-12 06:47:49]  *** Contents of shared directory: ***
[2026-03-12 06:47:49] total 422072
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd 226029365 Mar 11 23:12 ATLAS.root_0
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 23:12 start_atlas.sh
[2026-03-12 06:47:49] -rw-r--r-- 2 whitlerd whitlerd    597967 Mar 11 23:12 input.tar.gz
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd 201104241 Mar 12 06:46 HITS.pool.root.1
[2026-03-12 06:47:49] -rw------- 1 whitlerd whitlerd   4444160 Mar 12 06:47 result.tar.gz
06:47:51 (713842): run_atlas exited; CPU time 107738.113793
06:47:51 (713842): called boinc_finish(0)

</stderr_txt>
]]>

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