Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:03:59 (2536): wrapper (7.7.26015): starting
14:03:59 (2536): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 14:03:59] Arguments: --nthreads 8
[2026-03-12 14:03:59] Threads: 8
[2026-03-12 14:03:59] Checking for CVMFS
[2026-03-12 14:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 14:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 14:04:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 14:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 14:04:09] 2.11.2.0 773 124713 133672 157201 2 54 20708325 25165825 4784 130560 153 36710213 99.811 28894287 1057 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 14:04:09] CVMFS is ok
[2026-03-12 14:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 14:04:09] Checking for apptainer binary...
[2026-03-12 14:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 14:04:09] Running /usr/bin/apptainer --version
[2026-03-12 14:04:09] apptainer version 1.3.2-1.el7
[2026-03-12 14:04:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 14:04:24] cg-vwn384.simple-grid.lan
[2026-03-12 14:04:24] apptainer works
[2026-03-12 14:04:24] Set ATHENA_PROC_NUMBER=8
[2026-03-12 14:04:24] Set ATHENA_CORE_NUMBER=8
[2026-03-12 14:04:24] Starting ATLAS job with PandaID=7050365880
[2026-03-12 14:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 19:07:38]  *** The last 200 lines of the pilot log: ***
[2026-03-12 19:07:38] 2026-03-12 18:06:42,827 | INFO     | total number of processed events: 400 (read)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,829 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7050365880/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,830 | INFO     | extracted standard info from prmon json
[2026-03-12 19:07:38] 2026-03-12 18:06:42,830 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 19:07:38] 2026-03-12 18:06:42,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 19:07:38] 2026-03-12 18:06:42,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 19:07:38] 2026-03-12 18:06:42,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 19:07:38] 2026-03-12 18:06:42,837 | INFO     | fitting pss+swap vs Time
[2026-03-12 19:07:38] 2026-03-12 18:06:42,837 | INFO     | sum of square deviations: 7407141672.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,840 | INFO     | sum of deviations: 59470663936.999985
[2026-03-12 19:07:38] 2026-03-12 18:06:42,841 | INFO     | mean x: 1773330022.5
[2026-03-12 19:07:38] 2026-03-12 18:06:42,841 | INFO     | mean y: 2475639.2569444445
[2026-03-12 19:07:38] 2026-03-12 18:06:42,841 | INFO     | intersect: -14235285495.533745
[2026-03-12 19:07:38] 2026-03-12 18:06:42,841 | INFO     | chi2: 7.262158652620371
[2026-03-12 19:07:38] 2026-03-12 18:06:42,842 | INFO     | sum of square deviations: 7028008982.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,845 | INFO     | sum of deviations: 77535530531.00002
[2026-03-12 19:07:38] 2026-03-12 18:06:42,845 | INFO     | mean x: 1773329870.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,845 | INFO     | mean y: 2482798.1272084806
[2026-03-12 19:07:38] 2026-03-12 18:06:42,845 | INFO     | intersect: -19561532078.500233
[2026-03-12 19:07:38] 2026-03-12 18:06:42,846 | INFO     | chi2: 6.548069129156221
[2026-03-12 19:07:38] 2026-03-12 18:06:42,846 | INFO     | current chi2=6.548069129156221 (change=9.833020147618079 %)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,846 | INFO     | right removable region: 282
[2026-03-12 19:07:38] 2026-03-12 18:06:42,846 | INFO     | sum of square deviations: 7028008982.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,849 | INFO     | sum of deviations: -40343692366.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,849 | INFO     | mean x: 1773330175.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,849 | INFO     | mean y: 2515759.2791519435
[2026-03-12 19:07:38] 2026-03-12 18:06:42,849 | INFO     | intersect: 10182167951.924137
[2026-03-12 19:07:38] 2026-03-12 18:06:42,850 | INFO     | chi2: 2.571760600527787
[2026-03-12 19:07:38] 2026-03-12 18:06:42,850 | INFO     | current chi2=2.571760600527787 (change=64.58682984569842 %)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,851 | INFO     | sum of square deviations: 6662039329.5
[2026-03-12 19:07:38] 2026-03-12 18:06:42,853 | INFO     | sum of deviations: -91359878882.5
[2026-03-12 19:07:38] 2026-03-12 18:06:42,853 | INFO     | mean x: 1773330327.5
[2026-03-12 19:07:38] 2026-03-12 18:06:42,853 | INFO     | mean y: 2536913.14028777
[2026-03-12 19:07:38] 2026-03-12 18:06:42,854 | INFO     | intersect: 24321103034.72807
[2026-03-12 19:07:38] 2026-03-12 18:06:42,854 | INFO     | chi2: 1.0765941653229945
[2026-03-12 19:07:38] 2026-03-12 18:06:42,854 | INFO     | current chi2=1.0765941653229945 (change=58.137854468178276 %)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,855 | INFO     | sum of square deviations: 6309000152.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,857 | INFO     | sum of deviations: -94996776444.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,858 | INFO     | mean x: 1773330480.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,858 | INFO     | mean y: 2538464.84981685
[2026-03-12 19:07:38] 2026-03-12 18:06:42,858 | INFO     | intersect: 26704182958.62716
[2026-03-12 19:07:38] 2026-03-12 18:06:42,858 | INFO     | chi2: 1.039473874322224
[2026-03-12 19:07:38] 2026-03-12 18:06:42,859 | INFO     | current chi2=1.039473874322224 (change=3.4479372261537162 %)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,859 | INFO     | left removable region: 30
[2026-03-12 19:07:38] 2026-03-12 18:06:42,859 | INFO     | sum of square deviations: 4962187923.0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,861 | INFO     | sum of deviations: -51114176764.00002
[2026-03-12 19:07:38] 2026-03-12 18:06:42,861 | INFO     | mean x: 1773330754.5
[2026-03-12 19:07:38] 2026-03-12 18:06:42,862 | INFO     | mean y: 2535693.5793650793
[2026-03-12 19:07:38] 2026-03-12 18:06:42,862 | INFO     | intersect: 18269143700.587433
[2026-03-12 19:07:38] 2026-03-12 18:06:42,862 | INFO     | chi2: 0.22592120229782295
[2026-03-12 19:07:38] 2026-03-12 18:06:42,862 | INFO     | current memory leak: -10.30 B/s (using 252 data points, chi2=0.23)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,863 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,863 | INFO     | ..............................
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . Timing measurements:
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . get job = 0 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . initial setup = 96 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . payload setup = 140 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . stage-in = 0 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . payload execution = 17644 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . stage-out = 3 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | . log creation = 1 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,864 | INFO     | ..............................
[2026-03-12 19:07:38] 2026-03-12 18:06:42,977 | INFO     | 
[2026-03-12 19:07:38] 2026-03-12 18:06:42,977 | INFO     | job summary report
[2026-03-12 19:07:38] 2026-03-12 18:06:42,977 | INFO     | --------------------------------------------------
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | PanDA job id: 7050365880
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | task id: 48967085
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | errors: (none)
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | pilot state: finished 
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | transexitcode: 0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | exeerrorcode: 0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | exeerrordiag: 
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | exitcode: 0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,978 | INFO     | exitmsg: OK
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | cpuconsumptiontime: 67956 s
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | nevents: 400
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | neventsw: 0
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | pid: 11181
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | pgrp: 11181
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | corecount: 8
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | event service: False
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | sizes: {0: 2279152, 1: 2279838, 2: 2280299, 12: 2280299, 17789: 2312425, 17793: 2321747}
[2026-03-12 19:07:38] 2026-03-12 18:06:42,979 | INFO     | --------------------------------------------------
[2026-03-12 19:07:38] 2026-03-12 18:06:42,980 | INFO     | 
[2026-03-12 19:07:38] 2026-03-12 18:06:42,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-03-12 19:07:38] 2026-03-12 18:06:43,255 | INFO     | PID=6635 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 19:07:38] 2026-03-12 18:06:43,256 | INFO     | .. there are 9 such processes running
[2026-03-12 19:07:38] 2026-03-12 18:06:43,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 19:07:38] 2026-03-12 18:06:43,498 | INFO     | job 7050365880 has completed (purged errors)
[2026-03-12 19:07:38] 2026-03-12 18:06:43,499 | INFO     | overall cleanup function is called
[2026-03-12 19:07:38] 2026-03-12 18:06:44,507 | INFO     | --- collectZombieJob: --- 10, [11181]
[2026-03-12 19:07:38] 2026-03-12 18:06:44,507 | INFO     | zombie collector waiting for pid 11181
[2026-03-12 19:07:38] 2026-03-12 18:06:44,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 19:07:38] 2026-03-12 18:06:44,508 | INFO     | collected zombie processes
[2026-03-12 19:07:38] 2026-03-12 18:06:44,508 | INFO     | will attempt to kill all subprocesses of pid=11181
[2026-03-12 19:07:38] 2026-03-12 18:06:44,660 | INFO     | process IDs to be killed: [11181] (in reverse order)
[2026-03-12 19:07:38] 2026-03-12 18:06:45,600 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 19:07:38] 2026-03-12 18:06:45,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 19:07:38] 2026-03-12 18:06:45,604 | INFO     | did not find any defunct processes belonging to 11181
[2026-03-12 19:07:38] 2026-03-12 18:06:45,607 | INFO     | did not find any defunct processes belonging to 11181
[2026-03-12 19:07:38] 2026-03-12 18:06:45,607 | INFO     | ready for new job
[2026-03-12 19:07:38] 2026-03-12 18:06:45,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 19:07:38] 2026-03-12 18:06:45,610 | INFO     | **************************************
[2026-03-12 19:07:38] 2026-03-12 18:06:45,610 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 19:07:38] 2026-03-12 18:06:45,610 | INFO     | **************************************
[2026-03-12 19:07:38] 2026-03-12 18:06:45,610 | INFO     | 
[2026-03-12 19:07:38] 2026-03-12 18:06:45,611 | INFO     | pilot is running in a VM
[2026-03-12 19:07:38] 2026-03-12 18:06:45,611 | INFO     | architecture information:
[2026-03-12 19:07:38] 2026-03-12 18:06:45,624 | INFO     | executing command: cat /etc/os-release
[2026-03-12 19:07:38] 2026-03-12 18:06:45,844 | INFO     | cat /etc/os-release:
[2026-03-12 19:07:38] NAME="CentOS Linux"
[2026-03-12 19:07:38] VERSION="7 (Core)"
[2026-03-12 19:07:38] ID="centos"
[2026-03-12 19:07:38] ID_LIKE="rhel fedora"
[2026-03-12 19:07:38] VERSION_ID="7"
[2026-03-12 19:07:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 19:07:38] ANSI_COLOR="0;31"
[2026-03-12 19:07:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 19:07:38] HOME_URL="https://www.centos.org/"
[2026-03-12 19:07:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 19:07:38] 
[2026-03-12 19:07:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 19:07:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 19:07:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 19:07:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 19:07:38] 
[2026-03-12 19:07:38] 2026-03-12 18:06:45,845 | INFO     | **************************************
[2026-03-12 19:07:38] 2026-03-12 18:06:46,348 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-03-12 19:07:38] 2026-03-12 18:06:46,553 | INFO     | sufficient remaining disk space (496856203264 B)
[2026-03-12 19:07:38] 2026-03-12 18:06:46,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 19:07:38] 2026-03-12 18:06:46,553 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 19:07:38] 2026-03-12 18:06:46,553 | INFO     | update_server=False
[2026-03-12 19:07:38] 2026-03-12 18:06:46,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 19:07:38] 2026-03-12 18:06:46,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 19:07:38] 2026-03-12 18:06:46,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:07:38] 2026-03-12 18:06:46,617 | INFO     | aborting loop
[2026-03-12 19:07:38] 2026-03-12 18:06:46,646 | INFO     | all payload control threads have been joined
[2026-03-12 19:07:38] 2026-03-12 18:06:46,660 | INFO     | all job control threads have been joined
[2026-03-12 19:07:38] 2026-03-12 18:06:46,817 | INFO     | all data control threads have been joined
[2026-03-12 19:07:38] 2026-03-12 18:06:47,561 | INFO     | [job] retrieve thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,623 | INFO     | [job] job monitor thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,652 | INFO     | [payload] control thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,666 | INFO     | [job] control thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,679 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,823 | INFO     | [data] control thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,885 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,950 | INFO     | [payload] validate_post thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:47,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:07:38] 2026-03-12 18:06:48,091 | INFO     | [data] copytool_in thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:48,405 | INFO     | [payload] failed_post thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:48,555 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:48,566 | INFO     | [data] copytool_out thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:48,663 | INFO     | [job] validate thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:48,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 19:07:38] 2026-03-12 18:06:48,864 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:49,002 | INFO     | [job] queue monitor thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:06:52,846 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 19:07:38] 2026-03-12 18:07:15,455 | INFO     | PID=6635 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 19:07:38] 2026-03-12 18:07:15,455 | INFO     | .. there are 9 such processes running
[2026-03-12 19:07:38] 2026-03-12 18:07:15,456 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 19:07:38] 2026-03-12 18:07:15,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 19:07:38] 2026-03-12 18:07:15,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 19:07:38] 2026-03-12 18:07:28,197 | INFO     | [monitor] cgroup control has ended
[2026-03-12 19:07:38] 2026-03-12 18:07:28,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545730266944)>', '<ExcThread(monitor, started 140545503549184)>']
[2026-03-12 19:07:38] 2026-03-12 18:07:28,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 19:07:38] 2026-03-12 18:07:28,533 | INFO     | [monitor] control thread has ended
[2026-03-12 19:07:38] 2026-03-12 18:07:33,340 | INFO     | all workflow threads have been joined
[2026-03-12 19:07:38] 2026-03-12 18:07:33,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 19:07:38] 2026-03-12 18:07:33,341 | INFO     | traces error code: 0
[2026-03-12 19:07:38] 2026-03-12 18:07:33,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 19:07:38] 2026-03-12 18:07:33,620 [wrapper] ==== pilot stdout END ====
[2026-03-12 19:07:38] 2026-03-12 18:07:33,652 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 19:07:38] 2026-03-12 18:07:33,724 [wrapper] pilotpid: 6635
[2026-03-12 19:07:38] 2026-03-12 18:07:33,855 [wrapper] Pilot exit status: 0
[2026-03-12 19:07:38] 2026-03-12 18:07:34,353 [wrapper] pandaids: 7050365880
[2026-03-12 19:07:38] 2026-03-12 18:07:35,214 [wrapper] cleanup supervisor_pilot 20022 6636
[2026-03-12 19:07:38] 2026-03-12 18:07:35,268 [wrapper] Test setup, not cleaning
[2026-03-12 19:07:38] 2026-03-12 18:07:35,354 [wrapper] apfmon messages muted
[2026-03-12 19:07:38] 2026-03-12 18:07:35,454 [wrapper] ==== wrapper stdout END ====
[2026-03-12 19:07:38] 2026-03-12 18:07:35,536 [wrapper] ==== wrapper stderr END ====
[2026-03-12 19:07:38]  *** Error codes and diagnostics ***
[2026-03-12 19:07:38]     "exeErrorCode": 0,
[2026-03-12 19:07:38]     "exeErrorDiag": "",
[2026-03-12 19:07:38]     "pilotErrorCode": 0,
[2026-03-12 19:07:38]     "pilotErrorDiag": "",
[2026-03-12 19:07:38]  *** Listing of results directory ***
[2026-03-12 19:07:38] total 416028
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc      5111 Mar 11 23:15 queuedata.json
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc    585013 Mar 11 23:15 pilot3.tar.gz
[2026-03-12 19:07:38] -rwx------. 1 boinc boinc     36322 Mar 11 23:15 runpilot2-wrapper.sh
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc       100 Mar 12 14:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 19:07:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 14:03 run_atlas
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc       105 Mar 12 14:03 job.xml
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc 211047871 Mar 12 14:03 EVNT.48967083._000492.pool.root.1
[2026-03-12 19:07:38] drwxrwx--x. 2 boinc boinc        68 Mar 12 14:03 shared
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc    597524 Mar 12 14:03 input.tar.gz
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc      6392 Mar 12 14:03 init_data.xml
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc     15845 Mar 12 14:03 start_atlas.sh
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc         0 Mar 12 14:03 boinc_lockfile
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc      2563 Mar 12 14:04 pandaJob.out
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc       415 Mar 12 14:09 workernode_map.json
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc   1006233 Mar 12 14:09 agis_schedconf.cvmfs.json
[2026-03-12 19:07:38] drwx------. 5 boinc boinc      4096 Mar 12 14:09 pilot3
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc 205054886 Mar 12 19:05 HITS.48967085._011889.pool.root.1
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc       531 Mar 12 19:05 boinc_task_state.xml
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc      1011 Mar 12 19:06 memory_monitor_summary.json
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc   1511578 Mar 12 19:06 agis_ddmendpoints.agis.ALL.json
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc    520905 Mar 12 19:06 log.48967085._011889.job.log.tgz.1
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc      6322 Mar 12 19:06 heartbeat.json
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc        95 Mar 12 19:07 pilot_heartbeat.json
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc      4880 Mar 12 19:07 pilotlog.txt
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc        28 Mar 12 19:07 wrapper_checkpoint.txt
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc      8192 Mar 12 19:07 boinc_mmap_file
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc   2473456 Mar 12 19:07 log.48967085._011889.job.log.1
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc       357 Mar 12 19:07 output.list
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc       620 Mar 12 19:07 runtime_log
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc   3010560 Mar 12 19:07 result.tar.gz
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc      8832 Mar 12 19:07 runtime_log.err
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc       656 Mar 12 19:07 3JeNDmz0gK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgBlLDmC910Hn.diag
[2026-03-12 19:07:38] -rw-r--r--. 1 boinc boinc     20776 Mar 12 19:07 stderr.txt
[2026-03-12 19:07:38] HITS file was successfully produced:
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc 205054886 Mar 12 19:05 shared/HITS.pool.root.1
[2026-03-12 19:07:38]  *** Contents of shared directory: ***
[2026-03-12 19:07:38] total 409896
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc 211047871 Mar 12 14:03 ATLAS.root_0
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc    597524 Mar 12 14:03 input.tar.gz
[2026-03-12 19:07:38] -rw-r--r--. 2 boinc boinc     15845 Mar 12 14:03 start_atlas.sh
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc 205054886 Mar 12 19:05 HITS.pool.root.1
[2026-03-12 19:07:38] -rw-------. 1 boinc boinc   3010560 Mar 12 19:07 result.tar.gz
19:07:40 (2536): run_atlas exited; CPU time 68225.640454
19:07:40 (2536): called boinc_finish(0)

</stderr_txt>
]]>

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