Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:49:06 (1836840): wrapper (7.7.26015): starting
04:49:06 (1836840): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 04:49:06] Arguments: --nthreads 4
[2026-03-14 04:49:06] Threads: 4
[2026-03-14 04:49:06] Checking for CVMFS
[2026-03-14 04:49:06] No cvmfs_config command found, will try listing directly
[2026-03-14 04:49:06] CVMFS is ok
[2026-03-14 04:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:49:06] Further information can be found at the LHC@home message board.
[2026-03-14 04:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:49:06] Checking for apptainer binary...
[2026-03-14 04:49:06] which: no apptainer in ((null))
[2026-03-14 04:49:06] apptainer is not installed, using version from CVMFS
[2026-03-14 04:49:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:49:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-14 04:49:06] apptainer works
[2026-03-14 04:49:06] Set ATHENA_PROC_NUMBER=4
[2026-03-14 04:49:06] Set ATHENA_CORE_NUMBER=4
[2026-03-14 04:49:06] Starting ATLAS job with PandaID=7051012112
[2026-03-14 04:49:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:34:43]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:34:43] 2026-03-14 05:33:40,013 | INFO     | intersect: -59662248394.828
[2026-03-14 06:34:43] 2026-03-14 05:33:40,013 | INFO     | chi2: 1.1155923410331539
[2026-03-14 06:34:43] 2026-03-14 05:33:40,013 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | sum of deviations: 10406601647.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | mean x: 1773463121.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | mean y: 2292981.0515463916
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | intersect: -65218132152.96741
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | chi2: 1.1174491813786163
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | current chi2=1.1174491813786163 (change=-0.16644434325739282 %)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | right removable region: 96
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | sum of square deviations: 282974608.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | sum of deviations: 869731961.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | mean x: 1773463426.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | mean y: 2327969.4226804124
[2026-03-14 06:34:43] 2026-03-14 05:33:40,014 | INFO     | intersect: -5448471429.711952
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | chi2: 0.00038521486353762215
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | current chi2=0.00038521486353762215 (change=99.9654699257633 %)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | sum of square deviations: 241429643.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | sum of deviations: 536256642.49999994
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | mean x: 1773463578.5
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | mean y: 2329182.597826087
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | intersect: -3936837575.8206716
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | chi2: 0.00010946379387098079
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | current chi2=0.00010946379387098079 (change=71.58370451604084 %)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | sum of square deviations: 204163828.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | sum of deviations: 416039154.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,015 | INFO     | mean x: 1773463731.0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | mean y: 2329671.103448276
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | intersect: -3611583515.7854824
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | chi2: 9.596589963004673e-05
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | current chi2=9.596589963004673e-05 (change=12.330921269587375 %)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | left removable region: 30
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | sum of square deviations: 89127252.5
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | sum of deviations: 203394282.5
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | mean x: 1773464005.5
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | mean y: 2329553.5303030303
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | intersect: -4044832552.5634365
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | chi2: 4.3520707441758206e-05
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | current memory leak: 2.28 B/s (using 66 data points, chi2=0.00)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,016 | INFO     | could have reported an average CPU frequency of 3568 MHz (7 samples)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | ..............................
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . Timing measurements:
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . get job = 0 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . initial setup = 6 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . payload setup = 9 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . stage-in = 0 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . payload execution = 6225 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . stage-out = 0 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | . log creation = 0 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,017 | INFO     | ..............................
[2026-03-14 06:34:43] 2026-03-14 05:33:40,067 | INFO     | 
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | job summary report
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | --------------------------------------------------
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | PanDA job id: 7051012112
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | task id: 48967094
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | errors: (none)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | pilot state: finished 
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | transexitcode: 0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | exeerrorcode: 0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | exeerrordiag: 
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | exitcode: 0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | exitmsg: OK
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | cpuconsumptiontime: 23868 s
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | nevents: 400
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | neventsw: 0
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | pid: 1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | pgrp: 1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | corecount: 4
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | event service: False
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | sizes: {0: 2280236, 11: 2280236, 6238: 2306993, 6239: 2306992, 6240: 2316126, 6242: 2316264}
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | --------------------------------------------------
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | 
[2026-03-14 06:34:43] 2026-03-14 05:33:40,068 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot116/slots/1
[2026-03-14 06:34:43] 2026-03-14 05:33:40,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:34:43] 2026-03-14 05:33:40,086 | INFO     | job 7051012112 has completed (purged errors)
[2026-03-14 06:34:43] 2026-03-14 05:33:40,087 | INFO     | overall cleanup function is called
[2026-03-14 06:34:43] 2026-03-14 05:33:40,837 | WARNING  | process 1847412 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 06:34:43] 2026-03-14 05:33:41,098 | INFO     | --- collectZombieJob: --- 10, [1847412]
[2026-03-14 06:34:43] 2026-03-14 05:33:41,098 | INFO     | zombie collector waiting for pid 1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:41,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:34:43] 2026-03-14 05:33:41,101 | INFO     | collected zombie processes
[2026-03-14 06:34:43] 2026-03-14 05:33:41,101 | INFO     | will attempt to kill all subprocesses of pid=1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:41,308 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:34:43] 2026-03-14 05:33:41,308 | INFO     | using path: /var/lib/boinc/var/slot116/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:34:43] 2026-03-14 05:33:41,308 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 06:34:43] 2026-03-14 05:33:41,308 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 06:34:43] 2026-03-14 05:33:41,308 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7051012112/payload.stdout) since it has not been created yet
[2026-03-14 06:34:43] 2026-03-14 05:33:41,309 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-14 06:34:43] 2026-03-14 05:33:41,321 | INFO     | sufficient remaining disk space (20215496704 B)
[2026-03-14 06:34:43] 2026-03-14 05:33:41,322 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 06:34:43] 2026-03-14 05:33:41,322 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot116/slots/1/PanDA_Pilot-7051012112/HITS.48967094._006895.pool.root.1 since it does not exist
[2026-03-14 06:34:43] 2026-03-14 05:33:42,290 | INFO     | process IDs to be killed: [1847412] (in reverse order)
[2026-03-14 06:34:43] 2026-03-14 05:33:42,503 | INFO     | number of running child processes to parent process 1847412: 1
[2026-03-14 06:34:43] 2026-03-14 05:33:42,503 | INFO     | maximum number of monitored processes: 6
[2026-03-14 06:34:43] 2026-03-14 05:33:42,503 | INFO     | aborting job monitoring since job object (job id=7051012112) has expired
[2026-03-14 06:34:43] 2026-03-14 05:33:42,572 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:34:43] 2026-03-14 05:33:42,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:34:43] 2026-03-14 05:33:42,604 | INFO     | did not find any defunct processes belonging to 1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:42,634 | INFO     | did not find any defunct processes belonging to 1847412
[2026-03-14 06:34:43] 2026-03-14 05:33:42,634 | INFO     | ready for new job
[2026-03-14 06:34:43] 2026-03-14 05:33:42,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:34:43] 2026-03-14 05:33:42,636 | INFO     | **************************************
[2026-03-14 06:34:43] 2026-03-14 05:33:42,636 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 06:34:43] 2026-03-14 05:33:42,636 | INFO     | **************************************
[2026-03-14 06:34:43] 2026-03-14 05:33:42,636 | INFO     | 
[2026-03-14 06:34:43] 2026-03-14 05:33:42,642 | INFO     | architecture information:
[2026-03-14 06:34:43] 2026-03-14 05:33:42,642 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:34:43] 2026-03-14 05:33:42,654 | INFO     | cat /etc/os-release:
[2026-03-14 06:34:43] NAME="CentOS Linux"
[2026-03-14 06:34:43] VERSION="7 (Core)"
[2026-03-14 06:34:43] ID="centos"
[2026-03-14 06:34:43] ID_LIKE="rhel fedora"
[2026-03-14 06:34:43] VERSION_ID="7"
[2026-03-14 06:34:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:34:43] ANSI_COLOR="0;31"
[2026-03-14 06:34:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:34:43] HOME_URL="https://www.centos.org/"
[2026-03-14 06:34:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:34:43] 
[2026-03-14 06:34:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:34:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:34:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:34:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:34:43] 
[2026-03-14 06:34:43] 2026-03-14 05:33:42,654 | INFO     | **************************************
[2026-03-14 06:34:43] 2026-03-14 05:33:43,157 | INFO     | executing command: df -mP /var/lib/boinc/var/slot116/slots/1
[2026-03-14 06:34:43] 2026-03-14 05:33:43,170 | INFO     | sufficient remaining disk space (20208156672 B)
[2026-03-14 06:34:43] 2026-03-14 05:33:43,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:34:43] 2026-03-14 05:33:43,170 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:34:43] 2026-03-14 05:33:43,170 | INFO     | update_server=False
[2026-03-14 06:34:43] 2026-03-14 05:33:43,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:34:43] 2026-03-14 05:33:43,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:34:43] 2026-03-14 05:33:43,171 | INFO     | will abort loop
[2026-03-14 06:34:43] 2026-03-14 05:33:43,243 | INFO     | all payload control threads have been joined
[2026-03-14 06:34:43] 2026-03-14 05:33:43,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:34:43] 2026-03-14 05:33:44,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:34:43] 2026-03-14 05:33:44,141 | INFO     | all data control threads have been joined
[2026-03-14 06:34:43] 2026-03-14 05:33:44,175 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,176 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,248 | INFO     | [payload] control thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,447 | INFO     | all job control threads have been joined
[2026-03-14 06:34:43] 2026-03-14 05:33:44,512 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,626 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,762 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:44,907 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:34:43] 2026-03-14 05:33:45,146 | INFO     | [data] control thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,247 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,452 | INFO     | [job] control thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,467 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,642 | INFO     | [job] validate thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:45,671 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:46,083 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:48,011 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:33:53,227 | INFO     | job.realtimelogging is not enabled
[2026-03-14 06:34:43] 2026-03-14 05:33:54,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:34:43] 2026-03-14 05:34:13,640 | INFO     | PID=1841516 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 06:34:43] 2026-03-14 05:34:13,640 | INFO     | .. there are 50 such processes running
[2026-03-14 06:34:43] 2026-03-14 05:34:13,641 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:34:43] 2026-03-14 05:34:13,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:34:43] 2026-03-14 05:34:13,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:34:43] 2026-03-14 05:34:20,485 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-14 06:34:43] 2026-03-14 05:34:37,119 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:34:43] 2026-03-14 05:34:38,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23026625705792)>', '<ExcThread(monitor, started 23026320000768)>']
[2026-03-14 06:34:43] 2026-03-14 05:34:38,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:34:43] 2026-03-14 05:34:38,774 | INFO     | [monitor] control thread has ended
[2026-03-14 06:34:43] 2026-03-14 05:34:43,418 | INFO     | all workflow threads have been joined
[2026-03-14 06:34:43] 2026-03-14 05:34:43,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:34:43] 2026-03-14 05:34:43,418 | INFO     | traces error code: 0
[2026-03-14 06:34:43] 2026-03-14 05:34:43,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:34:43] 2026-03-14 05:34:43,607 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:34:43] 2026-03-14 05:34:43,610 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:34:43] 2026-03-14 05:34:43,615 [wrapper] pilotpid: 1841516
[2026-03-14 06:34:43] 2026-03-14 05:34:43,618 [wrapper] Pilot exit status: 0
[2026-03-14 06:34:43] 2026-03-14 05:34:43,630 [wrapper] pandaids: 7051012112
[2026-03-14 06:34:43] 2026-03-14 05:34:43,774 [wrapper] cleanup supervisor_pilot 2788673 1841517
[2026-03-14 06:34:43] 2026-03-14 05:34:43,776 [wrapper] Test setup, not cleaning
[2026-03-14 06:34:43] 2026-03-14 05:34:43,779 [wrapper] apfmon messages muted
[2026-03-14 06:34:43] 2026-03-14 05:34:43,782 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:34:43] 2026-03-14 05:34:43,785 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:34:43]  *** Error codes and diagnostics ***
[2026-03-14 06:34:43]     "exeErrorCode": 0,
[2026-03-14 06:34:43]     "exeErrorDiag": "",
[2026-03-14 06:34:43]     "pilotErrorCode": 0,
[2026-03-14 06:34:43]     "pilotErrorDiag": "",
[2026-03-14 06:34:43]  *** Listing of results directory ***
[2026-03-14 06:34:43] total 424548
[2026-03-14 06:34:43] -rwx------. 1 boinc boinc     36322 Mar 12 03:15 runpilot2-wrapper.sh
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc    585013 Mar 12 03:15 pilot3.tar.gz
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc      5111 Mar 12 03:17 queuedata.json
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc       100 Mar 14 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:34:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 04:49 run_atlas
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc       105 Mar 14 04:49 job.xml
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc      6709 Mar 14 04:49 init_data.xml
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc 219247782 Mar 14 04:49 EVNT.48967092._000289.pool.root.1
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:49 start_atlas.sh
[2026-03-14 06:34:43] drwxrwx--x. 2 boinc boinc      4096 Mar 14 04:49 shared
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc    597538 Mar 14 04:49 input.tar.gz
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc         0 Mar 14 04:49 boinc_lockfile
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc      2597 Mar 14 04:49 pandaJob.out
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc   1004579 Mar 14 04:49 agis_schedconf.cvmfs.json
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc   1511579 Mar 14 04:49 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc       444 Mar 14 04:49 workernode_map.json
[2026-03-14 06:34:43] drwx------. 5 boinc boinc      4096 Mar 14 04:49 pilot3
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc 209173579 Mar 14 06:33 HITS.48967094._006895.pool.root.1
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc       529 Mar 14 06:33 boinc_task_state.xml
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc      1030 Mar 14 06:33 memory_monitor_summary.json
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc    289504 Mar 14 06:33 log.48967094._006895.job.log.tgz.1
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc      6350 Mar 14 06:33 heartbeat.json
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc        95 Mar 14 06:34 pilot_heartbeat.json
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc      8192 Mar 14 06:34 boinc_mmap_file
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc        27 Mar 14 06:34 wrapper_checkpoint.txt
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc      4904 Mar 14 06:34 pilotlog.txt
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc    899977 Mar 14 06:34 log.48967094._006895.job.log.1
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc       357 Mar 14 06:34 output.list
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc       620 Mar 14 06:34 runtime_log
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc   1208320 Mar 14 06:34 result.tar.gz
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc      9221 Mar 14 06:34 runtime_log.err
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc       663 Mar 14 06:34 VHQKDmOlkK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmE0iLDmxmkk6m.diag
[2026-03-14 06:34:43] -rw-r--r--. 1 boinc boinc     21290 Mar 14 06:34 stderr.txt
[2026-03-14 06:34:43] HITS file was successfully produced:
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc 209173579 Mar 14 06:33 shared/HITS.pool.root.1
[2026-03-14 06:34:43]  *** Contents of shared directory: ***
[2026-03-14 06:34:43] total 420172
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc 219247782 Mar 14 04:49 ATLAS.root_0
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:49 start_atlas.sh
[2026-03-14 06:34:43] -rw-r--r--. 2 boinc boinc    597538 Mar 14 04:49 input.tar.gz
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc 209173579 Mar 14 06:33 HITS.pool.root.1
[2026-03-14 06:34:43] -rw-------. 1 boinc boinc   1208320 Mar 14 06:34 result.tar.gz
06:34:45 (1836840): run_atlas exited; CPU time 24159.386650
06:34:45 (1836840): called boinc_finish(0)

</stderr_txt>
]]>

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