Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:01 (377557): wrapper (7.7.26015): starting
00:04:01 (377557): wrapper: running run_atlas (--nthreads 9)
[2026-03-12 00:04:01] Arguments: --nthreads 9
[2026-03-12 00:04:01] Threads: 9
[2026-03-12 00:04:01] Checking for CVMFS
[2026-03-12 00:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:04:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:04:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:04:03] 2.13.3.0 2758065 50874 438292 157181 1 636 23274498 32935936 45423 16776704 0 190155151 99.554 220899047 29053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 00:04:03] CVMFS is ok
[2026-03-12 00:04:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:04:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:04:03] Further information can be found at the LHC@home message board.
[2026-03-12 00:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:04:03] Checking for apptainer binary...
[2026-03-12 00:04:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:04:03] Running /usr/bin/apptainer --version
[2026-03-12 00:04:04] apptainer version 1.4.5-2.el9
[2026-03-12 00:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:04:04] c6-12-29-1.aglt2.org
[2026-03-12 00:04:04] apptainer works
[2026-03-12 00:04:04] Set ATHENA_PROC_NUMBER=9
[2026-03-12 00:04:04] Set ATHENA_CORE_NUMBER=9
[2026-03-12 00:04:05] Starting ATLAS job with PandaID=7036944500
[2026-03-12 00:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 13:06:52]  *** The last 200 lines of the pilot log: ***
[2026-03-12 13:06:52] 2026-03-12 17:05:37,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 13:06:52] 2026-03-12 17:05:37,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 13:06:52] 2026-03-12 17:05:37,571 | INFO     | fitting pss+swap vs Time
[2026-03-12 13:06:52] 2026-03-12 17:05:37,572 | INFO     | sum of square deviations: 139365958465.29
[2026-03-12 13:06:52] 2026-03-12 17:05:37,619 | INFO     | sum of deviations: 710838662938.9719
[2026-03-12 13:06:52] 2026-03-12 17:05:37,620 | INFO     | mean x: 1773311784.691906
[2026-03-12 13:06:52] 2026-03-12 17:05:37,620 | INFO     | mean y: 2526088.6566579635
[2026-03-12 13:06:52] 2026-03-12 17:05:37,620 | INFO     | intersect: -9042283647.41861
[2026-03-12 13:06:52] 2026-03-12 17:05:37,621 | INFO     | chi2: 10.610225826601715
[2026-03-12 13:06:52] 2026-03-12 17:05:37,630 | INFO     | sum of square deviations: 136654631532.60468
[2026-03-12 13:06:52] 2026-03-12 17:05:37,679 | INFO     | sum of deviations: 956601689190.3981
[2026-03-12 13:06:52] 2026-03-12 17:05:37,680 | INFO     | mean x: 1773311632.193167
[2026-03-12 13:06:52] 2026-03-12 17:05:37,680 | INFO     | mean y: 2539911.9224704336
[2026-03-12 13:06:52] 2026-03-12 17:05:37,680 | INFO     | intersect: -12410891552.434664
[2026-03-12 13:06:52] 2026-03-12 17:05:37,681 | INFO     | chi2: 7.103476705409897
[2026-03-12 13:06:52] 2026-03-12 17:05:37,681 | INFO     | current chi2=7.103476705409897 (change=33.050654891809906 %)
[2026-03-12 13:06:52] 2026-03-12 17:05:37,682 | INFO     | sum of square deviations: 133978700612.41652
[2026-03-12 13:06:52] 2026-03-12 17:05:37,752 | INFO     | sum of deviations: 948397673543.0841
[2026-03-12 13:06:52] 2026-03-12 17:05:37,772 | INFO     | mean x: 1773311479.6944444
[2026-03-12 13:06:52] 2026-03-12 17:05:37,773 | INFO     | mean y: 2539444.376984127
[2026-03-12 13:06:52] 2026-03-12 17:05:37,773 | INFO     | intersect: -12550235542.407696
[2026-03-12 13:06:52] 2026-03-12 17:05:37,774 | INFO     | chi2: 7.102403426713663
[2026-03-12 13:06:52] 2026-03-12 17:05:37,774 | INFO     | current chi2=7.102403426713663 (change=0.01510920272908867 %)
[2026-03-12 13:06:52] 2026-03-12 17:05:37,774 | INFO     | right removable region: 755
[2026-03-12 13:06:52] 2026-03-12 17:05:37,775 | INFO     | sum of square deviations: 136654588343.98933
[2026-03-12 13:06:52] 2026-03-12 17:05:37,840 | INFO     | sum of deviations: 449972029396.20435
[2026-03-12 13:06:52] 2026-03-12 17:05:37,841 | INFO     | mean x: 1773311937.1918528
[2026-03-12 13:06:52] 2026-03-12 17:05:37,841 | INFO     | mean y: 2540755.032851511
[2026-03-12 13:06:52] 2026-03-12 17:05:37,841 | INFO     | intersect: -5836566301.673814
[2026-03-12 13:06:52] 2026-03-12 17:05:37,842 | INFO     | chi2: 6.568718370117514
[2026-03-12 13:06:52] 2026-03-12 17:05:37,842 | INFO     | current chi2=6.568718370117514 (change=38.09068272940455 %)
[2026-03-12 13:06:52] 2026-03-12 17:05:37,843 | INFO     | sum of square deviations: 133978614357.18933
[2026-03-12 13:06:52] 2026-03-12 17:05:37,919 | INFO     | sum of deviations: 276217752059.4931
[2026-03-12 13:06:52] 2026-03-12 17:05:37,919 | INFO     | mean x: 1773312089.691799
[2026-03-12 13:06:52] 2026-03-12 17:05:37,919 | INFO     | mean y: 2550651.4828042327
[2026-03-12 13:06:52] 2026-03-12 17:05:37,920 | INFO     | intersect: -3653408036.1382027
[2026-03-12 13:06:52] 2026-03-12 17:05:37,943 | INFO     | chi2: 4.8413080948491
[2026-03-12 13:06:52] 2026-03-12 17:05:37,944 | INFO     | current chi2=4.8413080948491 (change=26.29752377764844 %)
[2026-03-12 13:06:52] 2026-03-12 17:05:37,945 | INFO     | sum of square deviations: 131337803820.3886
[2026-03-12 13:06:52] 2026-03-12 17:05:38,029 | INFO     | sum of deviations: 181652535995.14517
[2026-03-12 13:06:52] 2026-03-12 17:05:38,029 | INFO     | mean x: 1773312242.1917443
[2026-03-12 13:06:52] 2026-03-12 17:05:38,029 | INFO     | mean y: 2556111.7976031955
[2026-03-12 13:06:52] 2026-03-12 17:05:38,029 | INFO     | intersect: -2450101512.5516872
[2026-03-12 13:06:52] 2026-03-12 17:05:38,030 | INFO     | chi2: 4.36861200747858
[2026-03-12 13:06:52] 2026-03-12 17:05:38,030 | INFO     | current chi2=4.36861200747858 (change=9.763809245551709 %)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,030 | INFO     | left removable region: 30
[2026-03-12 13:06:52] 2026-03-12 17:05:38,040 | INFO     | sum of square deviations: 118163382133.39886
[2026-03-12 13:06:52] 2026-03-12 17:05:38,091 | INFO     | sum of deviations: 242149393758.2857
[2026-03-12 13:06:52] 2026-03-12 17:05:38,091 | INFO     | mean x: 1773312364.1986208
[2026-03-12 13:06:52] 2026-03-12 17:05:38,092 | INFO     | mean y: 2580962.6855172412
[2026-03-12 13:06:52] 2026-03-12 17:05:38,092 | INFO     | intersect: -3631425665.950044
[2026-03-12 13:06:52] 2026-03-12 17:05:38,116 | INFO     | chi2: 0.2077109491286477
[2026-03-12 13:06:52] 2026-03-12 17:05:38,116 | INFO     | current memory leak: 2.05 B/s (using 725 data points, chi2=0.21)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,117 | INFO     | could have reported an average CPU frequency of 2615 MHz (29 samples)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,117 | INFO     | ..............................
[2026-03-12 13:06:52] 2026-03-12 17:05:38,117 | INFO     | . Timing measurements:
[2026-03-12 13:06:52] 2026-03-12 17:05:38,117 | INFO     | . get job = 1 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,117 | INFO     | . initial setup = 41 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | . payload setup = 46 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | . stage-in = 0 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | . payload execution = 46701 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | . stage-out = 6 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | . log creation = 1 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,118 | INFO     | ..............................
[2026-03-12 13:06:52] 2026-03-12 17:05:38,261 | INFO     | time since job start (46772s) is within the limit (349056.0s)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,719 | INFO     | 
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | job summary report
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | --------------------------------------------------
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | PanDA job id: 7036944500
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | task id: 48838605
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | errors: (none)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | pilot state: finished 
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | transexitcode: 0
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | exeerrorcode: 0
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | exeerrordiag: 
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | exitcode: 0
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | exitmsg: OK
[2026-03-12 13:06:52] 2026-03-12 17:05:38,720 | INFO     | cpuconsumptiontime: 48461 s
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | nevents: 400
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | neventsw: 0
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | pid: 411362
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | pgrp: 411362
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | corecount: 9
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | event service: False
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | sizes: {0: 2279091, 1: 2279692, 2: 2279776, 3: 2279832, 5: 2279832, 6: 2280449, 46754: 2325045, 46756: 2325044, 46763: 2334098, 46764: 2334154, 46766: 2334348}
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | --------------------------------------------------
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | 
[2026-03-12 13:06:52] 2026-03-12 17:05:38,721 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 13:06:52] 2026-03-12 17:05:38,783 | INFO     | job 7036944500 has completed (purged errors)
[2026-03-12 13:06:52] 2026-03-12 17:05:38,784 | INFO     | overall cleanup function is called
[2026-03-12 13:06:52] 2026-03-12 17:05:39,796 | INFO     | --- collectZombieJob: --- 10, [411362]
[2026-03-12 13:06:52] 2026-03-12 17:05:39,796 | INFO     | zombie collector waiting for pid 411362
[2026-03-12 13:06:52] 2026-03-12 17:05:39,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 13:06:52] 2026-03-12 17:05:39,797 | INFO     | collected zombie processes
[2026-03-12 13:06:52] 2026-03-12 17:05:39,797 | INFO     | will attempt to kill all subprocesses of pid=411362
[2026-03-12 13:06:52] 2026-03-12 17:05:41,132 | INFO     | process IDs to be killed: [411362] (in reverse order)
[2026-03-12 13:06:52] 2026-03-12 17:05:41,565 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 13:06:52] 2026-03-12 17:05:41,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 13:06:52] 2026-03-12 17:05:41,612 | INFO     | did not find any defunct processes belonging to 411362
[2026-03-12 13:06:52] 2026-03-12 17:05:41,660 | INFO     | did not find any defunct processes belonging to 411362
[2026-03-12 13:06:52] 2026-03-12 17:05:41,660 | INFO     | ready for new job
[2026-03-12 13:06:52] 2026-03-12 17:05:41,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 13:06:52] 2026-03-12 17:05:41,668 | INFO     | **************************************
[2026-03-12 13:06:52] 2026-03-12 17:05:41,668 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 13:06:52] 2026-03-12 17:05:41,668 | INFO     | **************************************
[2026-03-12 13:06:52] 2026-03-12 17:05:41,668 | INFO     | 
[2026-03-12 13:06:52] 2026-03-12 17:05:41,677 | INFO     | architecture information:
[2026-03-12 13:06:52] 2026-03-12 17:05:41,681 | INFO     | executing command: cat /etc/os-release
[2026-03-12 13:06:52] 2026-03-12 17:05:41,749 | INFO     | cat /etc/os-release:
[2026-03-12 13:06:52] NAME="CentOS Linux"
[2026-03-12 13:06:52] VERSION="7 (Core)"
[2026-03-12 13:06:52] ID="centos"
[2026-03-12 13:06:52] ID_LIKE="rhel fedora"
[2026-03-12 13:06:52] VERSION_ID="7"
[2026-03-12 13:06:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 13:06:52] ANSI_COLOR="0;31"
[2026-03-12 13:06:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 13:06:52] HOME_URL="https://www.centos.org/"
[2026-03-12 13:06:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 13:06:52] 
[2026-03-12 13:06:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 13:06:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 13:06:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 13:06:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 13:06:52] 
[2026-03-12 13:06:52] 2026-03-12 17:05:41,750 | INFO     | **************************************
[2026-03-12 13:06:52] 2026-03-12 17:05:42,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-12 13:06:52] 2026-03-12 17:05:42,329 | INFO     | sufficient remaining disk space (92158296064 B)
[2026-03-12 13:06:52] 2026-03-12 17:05:42,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 13:06:52] 2026-03-12 17:05:42,329 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 13:06:52] 2026-03-12 17:05:42,329 | INFO     | update_server=False
[2026-03-12 13:06:52] 2026-03-12 17:05:42,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 13:06:52] 2026-03-12 17:05:42,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 13:06:52] 2026-03-12 17:05:42,632 | INFO     | all data control threads have been joined
[2026-03-12 13:06:52] 2026-03-12 17:05:42,852 | INFO     | all job control threads have been joined
[2026-03-12 13:06:52] 2026-03-12 17:05:43,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:06:52] 2026-03-12 17:05:43,016 | INFO     | aborting loop
[2026-03-12 13:06:52] 2026-03-12 17:05:43,201 | INFO     | all payload control threads have been joined
[2026-03-12 13:06:52] 2026-03-12 17:05:43,335 | INFO     | [job] retrieve thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:43,638 | INFO     | [data] control thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:43,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 13:06:52] 2026-03-12 17:05:43,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 13:06:52] 2026-03-12 17:05:43,865 | INFO     | [job] control thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:43,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,021 | INFO     | [job] job monitor thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,209 | INFO     | [payload] control thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,345 | INFO     | [data] copytool_out thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,524 | INFO     | [payload] failed_post thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,689 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,734 | INFO     | [job] queue monitor thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,788 | INFO     | [job] validate thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,793 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,794 | INFO     | [data] copytool_in thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:44,857 | INFO     | [payload] validate_post thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:05:47,658 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 13:06:52] 2026-03-12 17:06:27,365 | INFO     | PID=385266 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 13:06:52] 2026-03-12 17:06:27,501 | INFO     | .. there are 68 such processes running
[2026-03-12 13:06:52] 2026-03-12 17:06:27,502 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 13:06:52] 2026-03-12 17:06:27,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 13:06:52] 2026-03-12 17:06:27,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 13:06:52] 2026-03-12 17:06:40,267 | INFO     | [monitor] cgroup control has ended
[2026-03-12 13:06:52] 2026-03-12 17:06:40,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571611604800)>', '<ExcThread(monitor, started 140570940905216)>']
[2026-03-12 13:06:52] 2026-03-12 17:06:40,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 13:06:52] 2026-03-12 17:06:40,679 | INFO     | [monitor] control thread has ended
[2026-03-12 13:06:52] 2026-03-12 17:06:45,468 | INFO     | all workflow threads have been joined
[2026-03-12 13:06:52] 2026-03-12 17:06:45,469 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 13:06:52] 2026-03-12 17:06:45,469 | INFO     | traces error code: 0
[2026-03-12 13:06:52] 2026-03-12 17:06:45,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 13:06:52] 2026-03-12 17:06:51,608 [wrapper] ==== pilot stdout END ====
[2026-03-12 13:06:52] 2026-03-12 17:06:51,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 13:06:52] 2026-03-12 17:06:51,706 [wrapper] pilotpid: 385266
[2026-03-12 13:06:52] 2026-03-12 17:06:51,732 [wrapper] Pilot exit status: 0
[2026-03-12 13:06:52] 2026-03-12 17:06:51,811 [wrapper] pandaids: 7036944500
[2026-03-12 13:06:52] 2026-03-12 17:06:52,109 [wrapper] cleanup supervisor_pilot 2581927 385268
[2026-03-12 13:06:52] 2026-03-12 17:06:52,132 [wrapper] Test setup, not cleaning
[2026-03-12 13:06:52] 2026-03-12 17:06:52,155 [wrapper] apfmon messages muted
[2026-03-12 13:06:52] 2026-03-12 17:06:52,195 [wrapper] ==== wrapper stdout END ====
[2026-03-12 13:06:52] 2026-03-12 17:06:52,221 [wrapper] ==== wrapper stderr END ====
[2026-03-12 13:06:52]  *** Error codes and diagnostics ***
[2026-03-12 13:06:52]     "exeErrorCode": 0,
[2026-03-12 13:06:52]     "exeErrorDiag": "",
[2026-03-12 13:06:52]     "pilotErrorCode": 0,
[2026-03-12 13:06:52]     "pilotErrorDiag": "",
[2026-03-12 13:06:52]  *** Listing of results directory ***
[2026-03-12 13:06:52] total 501552
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 19:25 pilot3.tar.gz
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 19:29 queuedata.json
[2026-03-12 13:06:52] -rwx------. 1 boincer umatlas     36322 Mar  3 19:29 runpilot2-wrapper.sh
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 13:06:52] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:04 run_atlas
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:04 job.xml
[2026-03-12 13:06:52] -rw-r--r--. 2 boincer umatlas 279948900 Mar 12 00:04 EVNT.48343768._000139.pool.root.1
[2026-03-12 13:06:52] -rw-r--r--. 2 boincer umatlas    597951 Mar 12 00:04 input.tar.gz
[2026-03-12 13:06:52] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:04 start_atlas.sh
[2026-03-12 13:06:52] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:04 shared
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:04 boinc_lockfile
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas      2561 Mar 12 00:04 pandaJob.out
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas        57 Mar 12 00:04 setup.sh.local
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas   1006227 Mar 12 00:05 agis_schedconf.cvmfs.json
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas       444 Mar 12 00:06 workernode_map.json
[2026-03-12 13:06:52] drwx------. 5 boincer umatlas      4096 Mar 12 00:06 pilot3
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas 218040138 Mar 12 13:00 HITS.48838605._003576.pool.root.1
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas       531 Mar 12 13:00 boinc_task_state.xml
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas      6879 Mar 12 13:03 init_data.xml
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas      1045 Mar 12 13:05 memory_monitor_summary.json
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas   1511578 Mar 12 13:05 agis_ddmendpoints.agis.ALL.json
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas    815969 Mar 12 13:05 log.48838605._003576.job.log.tgz.1
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas        95 Mar 12 13:05 pilot_heartbeat.json
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas      6396 Mar 12 13:05 heartbeat.json
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas      4819 Mar 12 13:06 pilotlog.txt
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas        28 Mar 12 13:06 wrapper_checkpoint.txt
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 13:06 boinc_mmap_file
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas   5010071 Mar 12 13:06 log.48838605._003576.job.log.1
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas       357 Mar 12 13:06 output.list
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas       620 Mar 12 13:06 runtime_log
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas   5847040 Mar 12 13:06 result.tar.gz
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas      9352 Mar 12 13:06 runtime_log.err
[2026-03-12 13:06:52] -rw-------. 1 boincer umatlas       660 Mar 12 13:06 iZSLDmVIpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKUILDmGlt1Kn.diag
[2026-03-12 13:06:52] -rw-r--r--. 1 boincer umatlas     21043 Mar 12 13:06 stderr.txt
[2026-03-12 13:06:53] HITS file was successfully produced:
[2026-03-12 13:06:53] -rw-------. 1 boincer umatlas 218040138 Mar 12 13:00 shared/HITS.pool.root.1
[2026-03-12 13:06:53]  *** Contents of shared directory: ***
[2026-03-12 13:06:53] total 492640
[2026-03-12 13:06:53] -rw-r--r--. 2 boincer umatlas 279948900 Mar 12 00:04 ATLAS.root_0
[2026-03-12 13:06:53] -rw-r--r--. 2 boincer umatlas    597951 Mar 12 00:04 input.tar.gz
[2026-03-12 13:06:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:04 start_atlas.sh
[2026-03-12 13:06:53] -rw-------. 1 boincer umatlas 218040138 Mar 12 13:00 HITS.pool.root.1
[2026-03-12 13:06:53] -rw-------. 1 boincer umatlas   5847040 Mar 12 13:06 result.tar.gz
13:06:55 (377557): run_atlas exited; CPU time 51181.187337
13:06:55 (377557): called boinc_finish(0)

</stderr_txt>
]]>

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