Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-15 00:19:05 (9336): vboxwrapper version 26210
2026-03-15 00:19:05 (9336): BOINC client version: 8.2.8
2026-03-15 00:19:06 (9336): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-03-15 00:19:06 (9336): Successfully copied 'init_data.xml' to the shared directory.
2026-03-15 00:19:07 (9336): Create VM. (boinc_bf94db67be7c1f85, slot#0)
2026-03-15 00:19:08 (9336): Setting Memory Size for VM. (4600MB)
2026-03-15 00:19:08 (9336): Setting CPU Count for VM. (6)
2026-03-15 00:19:08 (9336): Setting Chipset Options for VM.
2026-03-15 00:19:08 (9336): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-15 00:19:09 (9336): Setting Boot Options for VM.
2026-03-15 00:19:09 (9336): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-15 00:19:10 (9336): Enabling VM Network Access.
2026-03-15 00:19:10 (9336): Disabling USB Support for VM.
2026-03-15 00:19:10 (9336): Disabling COM Port Support for VM.
2026-03-15 00:19:10 (9336): Disabling LPT Port Support for VM.
2026-03-15 00:19:11 (9336): Disabling Audio Support for VM.
2026-03-15 00:19:11 (9336): Disabling Clipboard Support for VM.
2026-03-15 00:19:11 (9336): Disabling Drag and Drop Support for VM.
2026-03-15 00:19:12 (9336): Adding storage controller(s) to VM.
2026-03-15 00:19:12 (9336): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-15 00:19:13 (9336): Adding VirtualBox Guest Additions to VM.
2026-03-15 00:19:13 (9336): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-15 00:19:14 (9336): forwarding host port 57025 to guest port 80
2026-03-15 00:19:14 (9336): Enabling remote desktop for VM.
2026-03-15 00:19:14 (9336): Required extension pack not installed, remote desktop not enabled.
2026-03-15 00:19:14 (9336): Enabling shared directory for VM.
2026-03-15 00:19:15 (9336): Starting VM using VBoxManage interface. (boinc_bf94db67be7c1f85, slot#0)
2026-03-15 00:19:19 (9336): Successfully started VM. (PID = '7424')
2026-03-15 00:19:19 (9336): Reporting VM Process ID to BOINC.
2026-03-15 00:19:19 (9336): Guest Log: BIOS: VirtualBox 6.1.34
2026-03-15 00:19:19 (9336): Guest Log: CPUID EDX: 0x178bfbff
2026-03-15 00:19:19 (9336): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-15 00:19:19 (9336): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-15 00:19:19 (9336): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-15 00:19:19 (9336): Detected: Web Application Enabled (http://localhost:57025)
2026-03-15 00:19:19 (9336): Preference change detected
2026-03-15 00:19:19 (9336): Setting CPU throttle for VM. (75%)
2026-03-15 00:19:20 (9336): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-15 00:19:21 (9336): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-15 00:19:21 (9336): Guest Log: BIOS: Booting from Hard Disk...
2026-03-15 00:19:25 (9336): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-15 00:19:25 (9336): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-15 00:19:25 (9336): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-15 00:19:35 (9336): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-15 00:19:35 (9336): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-15 00:19:51 (9336): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.000561 main     Log opened 2026-03-15T00:19:50.089261000Z
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.000782 main     OS Product: Linux
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.000876 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.000961 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.001047 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.001050 main     Process ID: 1340
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.001053 main     Package type: LINUX_64BITS_GENERIC
2026-03-15 00:19:51 (9336): Guest Log: 00:00:00.003910 main     5.2.32 r132073 started. Verbose level = 0
2026-03-15 00:19:52 (9336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-15 00:19:52 (9336): Guest Log: [INFO] Mounting shared directory
2026-03-15 00:19:52 (9336): Guest Log: [INFO] Checking for init_data.xml
2026-03-15 00:19:58 (9336): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-15 00:19:58 (9336): Guest Log: [INFO] Detected branch: prod
2026-03-15 00:19:59 (9336): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-15 00:19:59 (9336): Guest Log: Copying input files
2026-03-15 00:20:01 (9336): Guest Log: Copied input files into RunAtlas.
2026-03-15 00:20:01 (9336): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-15 00:20:01 (9336): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-15 00:20:01 (9336): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-15 00:20:01 (9336): Guest Log: Further information can be found at the LHC@home message board.
2026-03-15 00:20:01 (9336): Guest Log: 00:00:10.017542 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 675 533 000ns (GuestNow=1 773 548 401 771 851 000 ns GuestLast=1 773 533 990 096 318 000 ns fSetTimeLastLoop=true )
2026-03-15 00:20:12 (9336): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-15 00:20:12 (9336): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-15 00:20:13 (9336): Guest Log: 2.6.3.0 1621 0 30140 157301 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-15 00:20:15 (9336): Guest Log: copied the webapp to /var/www
2026-03-15 00:20:15 (9336): Guest Log: ATHENA_PROC_NUMBER=6
2026-03-15 00:20:15 (9336): Guest Log: ATHENA_CORE_NUMBER=6
2026-03-15 00:20:15 (9336): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-15 00:20:16 (9336): Guest Log:  *** Starting ATLAS job. (PandaID=7051010790 taskID=48967094) ***
2026-03-15 01:59:25 (9336): Status Report: Elapsed Time: '6000.000000'
2026-03-15 01:59:25 (9336): Status Report: CPU Time: '22739.062500'
2026-03-15 03:39:31 (9336): Status Report: Elapsed Time: '12000.000000'
2026-03-15 03:39:31 (9336): Status Report: CPU Time: '49776.921875'
2026-03-15 05:19:37 (9336): Status Report: Elapsed Time: '18000.000000'
2026-03-15 05:19:37 (9336): Status Report: CPU Time: '76814.093750'
2026-03-15 06:59:43 (9336): Status Report: Elapsed Time: '24000.000000'
2026-03-15 06:59:43 (9336): Status Report: CPU Time: '103849.843750'
2026-03-15 07:46:24 (9336): Guest Log:  *** Job finished ***
2026-03-15 07:46:24 (9336): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:17,078 | INFO     | end of generic workflow (traces error code: 0)
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:17,079 | INFO     | traces error code: 0
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:17,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,354 | INFO     | PID=6055 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | INFO     | found 0 job(s) in 20 queues
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | CRITICAL | thread 'MainThread' is not alive
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,355 | INFO     | [monitor] control thread has ended
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,627 [wrapper] ==== pilot stdout END ====
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,635 [wrapper] ==== wrapper stdout RESUME ====
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,643 [wrapper] pilotpid: 6055
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,649 [wrapper] Pilot exit status: 0
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,756 [wrapper] pandaids: 7051010790
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,800 [wrapper] cleanup supervisor_pilot 32193 6056
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,806 [wrapper] Test setup, not cleaning
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,811 [wrapper] apfmon messages muted
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,816 [wrapper] ==== wrapper stdout END ====
2026-03-15 07:46:24 (9336): Guest Log: 2026-03-15 11:46:21,821 [wrapper] ==== wrapper stderr END ====
2026-03-15 07:46:24 (9336): Guest Log:  *** Error codes and diagnostics ***
2026-03-15 07:46:24 (9336): Guest Log:     "exeErrorCode": 0,
2026-03-15 07:46:24 (9336): Guest Log:     "exeErrorDiag": "",
2026-03-15 07:46:24 (9336): Guest Log:     "pilotErrorCode": 0,
2026-03-15 07:46:24 (9336): Guest Log:     "pilotErrorDiag": "",
2026-03-15 07:46:24 (9336): Guest Log:  *** Listing of results directory ***
2026-03-15 07:46:24 (9336): Guest Log: total 212840
2026-03-15 07:46:24 (9336): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 12 02:14 queuedata.json
2026-03-15 07:46:24 (9336): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 12 02:15 runpilot2-wrapper.sh
2026-03-15 07:46:24 (9336): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 12 02:15 pilot3.tar.gz
2026-03-15 07:46:24 (9336): Guest Log: -rwxr-xr-x. 1 atlas atlas      7829 Mar 15 04:20 init_data.xml
2026-03-15 07:46:24 (9336): Guest Log: -rwxr-xr-x. 1 atlas atlas    597528 Mar 15 04:20 input.tar.gz
2026-03-15 07:46:24 (9336): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 15 04:20 start_atlas.sh
2026-03-15 07:46:24 (9336): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 15 04:20 EVNT.48967092._000281.pool.root.1 -> /data/./ATLAS.root_0
2026-03-15 07:46:24 (9336): Guest Log: -rw-r--r--. 1 atlas atlas      2597 Mar 15 04:20 pandaJob.out
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas   1006481 Mar 15 04:21 agis_schedconf.cvmfs.json
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas       427 Mar 15 04:21 workernode_map.json
2026-03-15 07:46:24 (9336): Guest Log: drwx------. 5 atlas atlas      4096 Mar 15 04:21 pilot3
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas 205752521 Mar 15 11:44 HITS.48967094._006719.pool.root.1
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas        95 Mar 15 11:45 pilot_heartbeat.json
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas      1030 Mar 15 11:45 memory_monitor_summary.json
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 15 11:45 agis_ddmendpoints.agis.ALL.json
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas    593410 Mar 15 11:45 log.48967094._006719.job.log.tgz.1
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas      6373 Mar 15 11:45 heartbeat.json
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas       814 Mar 15 11:46 pilotlog.txt
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas   3574535 Mar 15 11:46 log.48967094._006719.job.log.1
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas       357 Mar 15 11:46 output.list
2026-03-15 07:46:24 (9336): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 15 11:46 runtime_log
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas   4188160 Mar 15 11:46 result.tar.gz
2026-03-15 07:46:24 (9336): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Mar 15 11:46 runtime_log.err
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas       655 Mar 15 11:46 pu0NDmClkK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBklLDmEBk4Qn.diag
2026-03-15 07:46:24 (9336): Guest Log: Looking for outputfile HITS.48967094._006719.pool.root.1
2026-03-15 07:46:24 (9336): Guest Log: HITS file was successfully produced
2026-03-15 07:46:24 (9336): Guest Log: -rw-------. 1 atlas atlas 205752521 Mar 15 11:44 /home/atlas/RunAtlas/HITS.48967094._006719.pool.root.1
2026-03-15 07:46:25 (9336): Guest Log: Successfully finished the ATLAS job!
2026-03-15 07:46:25 (9336): Guest Log: Copying the results back to the shared directory!
2026-03-15 07:46:26 (9336): Guest Log:  *** Contents of shared directory: ***
2026-03-15 07:46:26 (9336): Guest Log: total 419304
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root 218797198 Mar 15 04:19 ATLAS.root_0
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root 205752521 Mar 15 11:46 HITS.pool.root.1
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root      7829 Mar 15 04:19 init_data.xml
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root    597528 Mar 12 07:31 input.tar.gz
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root   4188160 Mar 15 11:46 result.tar.gz
2026-03-15 07:46:26 (9336): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 12 07:31 start_atlas.sh
2026-03-15 07:46:26 (9336): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-15 07:46:26 (9336): VM Completion File Detected.
2026-03-15 07:46:27 (9336): Powering off VM.
2026-03-15 07:46:28 (9336): Successfully stopped VM.
2026-03-15 07:46:28 (9336): Deregistering VM. (boinc_bf94db67be7c1f85, slot#0)
2026-03-15 07:46:28 (9336): Removing network bandwidth throttle group from VM.
2026-03-15 07:46:28 (9336): Removing VM from VirtualBox.
2026-03-15 07:46:34 (9336): called boinc_finish(0)

</stderr_txt>
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