Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:39 (16507): wrapper (7.7.26015): starting
16:18:39 (16507): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 16:18:39] Arguments: --nthreads 8
[2026-03-12 16:18:39] Threads: 8
[2026-03-12 16:18:39] Checking for CVMFS
[2026-03-12 16:18:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 16:18:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 16:18:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 16:18:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 16:18:42] 2.11.2.0 23802 124866 136888 157205 2 93 13426631 25165825 1034 130560 159 41029290 99.808 31838375 1074 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 16:18:42] CVMFS is ok
[2026-03-12 16:18:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 16:18:42] Checking for apptainer binary...
[2026-03-12 16:18:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 16:18:42] Running /usr/bin/apptainer --version
[2026-03-12 16:18:42] apptainer version 1.3.2-1.el7
[2026-03-12 16:18:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 16:18:57] cg-vwn426.simple-grid.lan
[2026-03-12 16:18:57] apptainer works
[2026-03-12 16:18:57] Set ATHENA_PROC_NUMBER=8
[2026-03-12 16:18:57] Set ATHENA_CORE_NUMBER=8
[2026-03-12 16:18:57] Starting ATLAS job with PandaID=7051010878
[2026-03-12 16:18:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 20:44:59]  *** The last 200 lines of the pilot log: ***
[2026-03-12 20:44:59] 2026-03-12 19:43:46,299 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7051010878/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,300 | INFO     | extracted standard info from prmon json
[2026-03-12 20:44:59] 2026-03-12 19:43:46,300 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 20:44:59] 2026-03-12 19:43:46,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 20:44:59] 2026-03-12 19:43:46,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 20:44:59] 2026-03-12 19:43:46,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 20:44:59] 2026-03-12 19:43:46,306 | INFO     | fitting pss+swap vs Time
[2026-03-12 20:44:59] 2026-03-12 19:43:46,307 | INFO     | sum of square deviations: 4844974562.5
[2026-03-12 20:44:59] 2026-03-12 19:43:46,309 | INFO     | sum of deviations: 101584536378.49997
[2026-03-12 20:44:59] 2026-03-12 19:43:46,309 | INFO     | mean x: 1773337005.5
[2026-03-12 20:44:59] 2026-03-12 19:43:46,309 | INFO     | mean y: 2431648.516
[2026-03-12 20:44:59] 2026-03-12 19:43:46,309 | INFO     | intersect: -37179108775.01124
[2026-03-12 20:44:59] 2026-03-12 19:43:46,310 | INFO     | chi2: 7.774337828837212
[2026-03-12 20:44:59] 2026-03-12 19:43:46,310 | INFO     | sum of square deviations: 4560048290.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,312 | INFO     | sum of deviations: 115726014519.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,313 | INFO     | mean x: 1773336853.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,313 | INFO     | mean y: 2439073.812244898
[2026-03-12 20:44:59] 2026-03-12 19:43:46,313 | INFO     | intersect: -45001734861.66942
[2026-03-12 20:44:59] 2026-03-12 19:43:46,313 | INFO     | chi2: 7.071483158654894
[2026-03-12 20:44:59] 2026-03-12 19:43:46,313 | INFO     | current chi2=7.071483158654894 (change=9.040701416077287 %)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,314 | INFO     | right removable region: 244
[2026-03-12 20:44:59] 2026-03-12 19:43:46,314 | INFO     | sum of square deviations: 4560048290.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,316 | INFO     | sum of deviations: 15717421833.000006
[2026-03-12 20:44:59] 2026-03-12 19:43:46,316 | INFO     | mean x: 1773337158.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,316 | INFO     | mean y: 2477571.363265306
[2026-03-12 20:44:59] 2026-03-12 19:43:46,317 | INFO     | intersect: -6109801595.842524
[2026-03-12 20:44:59] 2026-03-12 19:43:46,317 | INFO     | chi2: 2.9220463773602923
[2026-03-12 20:44:59] 2026-03-12 19:43:46,317 | INFO     | current chi2=2.9220463773602923 (change=62.41420887935178 %)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,318 | INFO     | sum of square deviations: 4286517580.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | sum of deviations: -37348223865.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | mean x: 1773337310.5
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | mean y: 2507040.9916666667
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | intersect: 15453510711.134323
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | chi2: 0.9744175245642113
[2026-03-12 20:44:59] 2026-03-12 19:43:46,320 | INFO     | current chi2=0.9744175245642113 (change=66.65290694514997 %)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,321 | INFO     | sum of square deviations: 4024149870.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,323 | INFO     | sum of deviations: -40920545820.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,323 | INFO     | mean x: 1773337463.0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,323 | INFO     | mean y: 2509079.693617021
[2026-03-12 20:44:59] 2026-03-12 19:43:46,323 | INFO     | intersect: 18035121992.545708
[2026-03-12 20:44:59] 2026-03-12 19:43:46,324 | INFO     | chi2: 0.9367991986307093
[2026-03-12 20:44:59] 2026-03-12 19:43:46,324 | INFO     | current chi2=0.9367991986307093 (change=3.8605962008253134 %)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,324 | INFO     | left removable region: 30
[2026-03-12 20:44:59] 2026-03-12 19:43:46,324 | INFO     | sum of square deviations: 3038856977.5
[2026-03-12 20:44:59] 2026-03-12 19:43:46,326 | INFO     | sum of deviations: -1999302724.5000014
[2026-03-12 20:44:59] 2026-03-12 19:43:46,326 | INFO     | mean x: 1773337737.5
[2026-03-12 20:44:59] 2026-03-12 19:43:46,326 | INFO     | mean y: 2503430.920560748
[2026-03-12 20:44:59] 2026-03-12 19:43:46,326 | INFO     | intersect: 1169204923.0582962
[2026-03-12 20:44:59] 2026-03-12 19:43:46,327 | INFO     | chi2: 0.05713893931289502
[2026-03-12 20:44:59] 2026-03-12 19:43:46,327 | INFO     | current memory leak: -0.66 B/s (using 214 data points, chi2=0.06)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | ..............................
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . Timing measurements:
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . get job = 0 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . initial setup = 125 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . payload setup = 146 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . stage-in = 0 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . payload execution = 15347 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . stage-out = 3 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,328 | INFO     | . log creation = 1 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,329 | INFO     | ..............................
[2026-03-12 20:44:59] 2026-03-12 19:43:46,340 | INFO     | time since job start (15504s) is within the limit (345600.0s)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,712 | INFO     | 
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | job summary report
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | --------------------------------------------------
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | PanDA job id: 7051010878
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | task id: 48967094
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | errors: (none)
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 20:44:59] 2026-03-12 19:43:46,713 | INFO     | pilot state: finished 
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | transexitcode: 0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | exeerrorcode: 0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | exeerrordiag: 
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | exitcode: 0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | exitmsg: OK
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | cpuconsumptiontime: 69353 s
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | nevents: 400
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | neventsw: 0
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | pid: 25002
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | pgrp: 25002
[2026-03-12 20:44:59] 2026-03-12 19:43:46,714 | INFO     | corecount: 8
[2026-03-12 20:44:59] 2026-03-12 19:43:46,715 | INFO     | event service: False
[2026-03-12 20:44:59] 2026-03-12 19:43:46,715 | INFO     | sizes: {0: 2279132, 1: 2280190, 2: 2280278, 15498: 2311380, 15501: 2320378, 15502: 2320756}
[2026-03-12 20:44:59] 2026-03-12 19:43:46,715 | INFO     | --------------------------------------------------
[2026-03-12 20:44:59] 2026-03-12 19:43:46,715 | INFO     | 
[2026-03-12 20:44:59] 2026-03-12 19:43:46,715 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-03-12 20:44:59] 2026-03-12 19:43:47,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 20:44:59] 2026-03-12 19:43:47,242 | INFO     | job 7051010878 has completed (purged errors)
[2026-03-12 20:44:59] 2026-03-12 19:43:47,243 | INFO     | overall cleanup function is called
[2026-03-12 20:44:59] 2026-03-12 19:43:47,530 | INFO     | PID=20492 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 20:44:59] 2026-03-12 19:43:47,530 | INFO     | .. there are 9 such processes running
[2026-03-12 20:44:59] 2026-03-12 19:43:48,251 | INFO     | --- collectZombieJob: --- 10, [25002]
[2026-03-12 20:44:59] 2026-03-12 19:43:48,251 | INFO     | zombie collector waiting for pid 25002
[2026-03-12 20:44:59] 2026-03-12 19:43:48,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 20:44:59] 2026-03-12 19:43:48,252 | INFO     | collected zombie processes
[2026-03-12 20:44:59] 2026-03-12 19:43:48,252 | INFO     | will attempt to kill all subprocesses of pid=25002
[2026-03-12 20:44:59] 2026-03-12 19:43:48,372 | INFO     | process IDs to be killed: [25002] (in reverse order)
[2026-03-12 20:44:59] 2026-03-12 19:43:49,310 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 20:44:59] 2026-03-12 19:43:49,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 20:44:59] 2026-03-12 19:43:49,313 | INFO     | did not find any defunct processes belonging to 25002
[2026-03-12 20:44:59] 2026-03-12 19:43:49,316 | INFO     | did not find any defunct processes belonging to 25002
[2026-03-12 20:44:59] 2026-03-12 19:43:49,316 | INFO     | ready for new job
[2026-03-12 20:44:59] 2026-03-12 19:43:49,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 20:44:59] 2026-03-12 19:43:49,318 | INFO     | **************************************
[2026-03-12 20:44:59] 2026-03-12 19:43:49,319 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 20:44:59] 2026-03-12 19:43:49,319 | INFO     | **************************************
[2026-03-12 20:44:59] 2026-03-12 19:43:49,319 | INFO     | 
[2026-03-12 20:44:59] 2026-03-12 19:43:49,320 | INFO     | pilot is running in a VM
[2026-03-12 20:44:59] 2026-03-12 19:43:49,320 | INFO     | architecture information:
[2026-03-12 20:44:59] 2026-03-12 19:43:49,324 | INFO     | executing command: cat /etc/os-release
[2026-03-12 20:44:59] 2026-03-12 19:43:49,528 | INFO     | cat /etc/os-release:
[2026-03-12 20:44:59] NAME="CentOS Linux"
[2026-03-12 20:44:59] VERSION="7 (Core)"
[2026-03-12 20:44:59] ID="centos"
[2026-03-12 20:44:59] ID_LIKE="rhel fedora"
[2026-03-12 20:44:59] VERSION_ID="7"
[2026-03-12 20:44:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 20:44:59] ANSI_COLOR="0;31"
[2026-03-12 20:44:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 20:44:59] HOME_URL="https://www.centos.org/"
[2026-03-12 20:44:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 20:44:59] 
[2026-03-12 20:44:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 20:44:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 20:44:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 20:44:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 20:44:59] 
[2026-03-12 20:44:59] 2026-03-12 19:43:49,528 | INFO     | **************************************
[2026-03-12 20:44:59] 2026-03-12 19:43:50,032 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-03-12 20:44:59] 2026-03-12 19:43:50,251 | INFO     | sufficient remaining disk space (497536729088 B)
[2026-03-12 20:44:59] 2026-03-12 19:43:50,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 20:44:59] 2026-03-12 19:43:50,252 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 20:44:59] 2026-03-12 19:43:50,252 | INFO     | update_server=False
[2026-03-12 20:44:59] 2026-03-12 19:43:50,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 20:44:59] 2026-03-12 19:43:50,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:44:59] 2026-03-12 19:43:50,254 | INFO     | aborting loop
[2026-03-12 20:44:59] 2026-03-12 19:43:51,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 20:44:59] 2026-03-12 19:43:51,197 | INFO     | all data control threads have been joined
[2026-03-12 20:44:59] 2026-03-12 19:43:51,259 | INFO     | [job] retrieve thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:51,260 | INFO     | [job] job monitor thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:51,273 | INFO     | all payload control threads have been joined
[2026-03-12 20:44:59] 2026-03-12 19:43:51,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 20:44:59] 2026-03-12 19:43:51,828 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:51,959 | INFO     | all job control threads have been joined
[2026-03-12 20:44:59] 2026-03-12 19:43:52,057 | INFO     | [job] validate thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,084 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,204 | INFO     | [data] control thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,280 | INFO     | [payload] control thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 20:44:59] 2026-03-12 19:43:52,421 | INFO     | [payload] failed_post thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,464 | INFO     | [job] queue monitor thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,624 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,643 | INFO     | [data] copytool_in thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,669 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,849 | INFO     | [payload] validate_post thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:52,966 | INFO     | [job] control thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:53,030 | INFO     | [data] copytool_out thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:43:56,315 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 20:44:59] 2026-03-12 19:44:19,710 | INFO     | PID=20492 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 20:44:59] 2026-03-12 19:44:19,710 | INFO     | .. there are 9 such processes running
[2026-03-12 20:44:59] 2026-03-12 19:44:19,712 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 20:44:59] 2026-03-12 19:44:19,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 20:44:59] 2026-03-12 19:44:19,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 20:44:59] 2026-03-12 19:44:47,470 | INFO     | [monitor] cgroup control has ended
[2026-03-12 20:44:59] 2026-03-12 19:44:49,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950361102144)>', '<ExcThread(monitor, started 139949521217280)>']
[2026-03-12 20:44:59] 2026-03-12 19:44:49,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 20:44:59] 2026-03-12 19:44:49,893 | INFO     | [monitor] control thread has ended
[2026-03-12 20:44:59] 2026-03-12 19:44:54,275 | INFO     | all workflow threads have been joined
[2026-03-12 20:44:59] 2026-03-12 19:44:54,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 20:44:59] 2026-03-12 19:44:54,276 | INFO     | traces error code: 0
[2026-03-12 20:44:59] 2026-03-12 19:44:54,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 20:44:59] 2026-03-12 19:44:54,635 [wrapper] ==== pilot stdout END ====
[2026-03-12 20:44:59] 2026-03-12 19:44:54,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 20:44:59] 2026-03-12 19:44:54,815 [wrapper] pilotpid: 20492
[2026-03-12 20:44:59] 2026-03-12 19:44:54,903 [wrapper] Pilot exit status: 0
[2026-03-12 20:44:59] 2026-03-12 19:44:55,355 [wrapper] pandaids: 7051010878
[2026-03-12 20:44:59] 2026-03-12 19:44:56,442 [wrapper] cleanup supervisor_pilot 28912 20493
[2026-03-12 20:44:59] 2026-03-12 19:44:56,503 [wrapper] Test setup, not cleaning
[2026-03-12 20:44:59] 2026-03-12 19:44:56,604 [wrapper] apfmon messages muted
[2026-03-12 20:44:59] 2026-03-12 19:44:56,687 [wrapper] ==== wrapper stdout END ====
[2026-03-12 20:44:59] 2026-03-12 19:44:56,802 [wrapper] ==== wrapper stderr END ====
[2026-03-12 20:44:59]  *** Error codes and diagnostics ***
[2026-03-12 20:44:59]     "exeErrorCode": 0,
[2026-03-12 20:44:59]     "exeErrorDiag": "",
[2026-03-12 20:44:59]     "pilotErrorCode": 0,
[2026-03-12 20:44:59]     "pilotErrorDiag": "",
[2026-03-12 20:44:59]  *** Listing of results directory ***
[2026-03-12 20:44:59] total 424780
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc      5111 Mar 12 03:14 queuedata.json
[2026-03-12 20:44:59] -rwx------. 1 boinc boinc     36322 Mar 12 03:15 runpilot2-wrapper.sh
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc       100 Mar 12 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 20:44:59] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 16:18 run_atlas
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc       105 Mar 12 16:18 job.xml
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc      6390 Mar 12 16:18 init_data.xml
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc 219833644 Mar 12 16:18 EVNT.48967092._000286.pool.root.1
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc     15845 Mar 12 16:18 start_atlas.sh
[2026-03-12 20:44:59] drwxrwx--x. 2 boinc boinc        68 Mar 12 16:18 shared
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc    597532 Mar 12 16:18 input.tar.gz
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc         0 Mar 12 16:18 boinc_lockfile
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc      2596 Mar 12 16:18 pandaJob.out
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc       415 Mar 12 16:25 workernode_map.json
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc   1006536 Mar 12 16:25 agis_schedconf.cvmfs.json
[2026-03-12 20:44:59] drwx------. 5 boinc boinc      4096 Mar 12 16:25 pilot3
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc 205949123 Mar 12 20:42 HITS.48967094._006807.pool.root.1
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc       530 Mar 12 20:42 boinc_task_state.xml
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc      1018 Mar 12 20:43 memory_monitor_summary.json
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc   1511578 Mar 12 20:43 agis_ddmendpoints.agis.ALL.json
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc    464836 Mar 12 20:43 log.48967094._006807.job.log.tgz.1
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc      6323 Mar 12 20:43 heartbeat.json
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc        95 Mar 12 20:44 pilot_heartbeat.json
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc        28 Mar 12 20:44 wrapper_checkpoint.txt
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc      8192 Mar 12 20:44 boinc_mmap_file
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc      4880 Mar 12 20:44 pilotlog.txt
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc   2169955 Mar 12 20:44 log.48967094._006807.job.log.1
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc       357 Mar 12 20:44 output.list
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc       620 Mar 12 20:44 runtime_log
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc   2652160 Mar 12 20:44 result.tar.gz
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc       655 Mar 12 20:44 xMHMDmwkkK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSwiLDmpEKc2m.diag
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc      8816 Mar 12 20:44 runtime_log.err
[2026-03-12 20:44:59] -rw-r--r--. 1 boinc boinc     20796 Mar 12 20:44 stderr.txt
[2026-03-12 20:44:59] HITS file was successfully produced:
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc 205949123 Mar 12 20:42 shared/HITS.pool.root.1
[2026-03-12 20:44:59]  *** Contents of shared directory: ***
[2026-03-12 20:44:59] total 419000
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc 219833644 Mar 12 16:18 ATLAS.root_0
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc     15845 Mar 12 16:18 start_atlas.sh
[2026-03-12 20:44:59] -rw-r--r--. 2 boinc boinc    597532 Mar 12 16:18 input.tar.gz
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc 205949123 Mar 12 20:42 HITS.pool.root.1
[2026-03-12 20:44:59] -rw-------. 1 boinc boinc   2652160 Mar 12 20:44 result.tar.gz
20:45:01 (16507): run_atlas exited; CPU time 69566.462173
20:45:01 (16507): called boinc_finish(0)

</stderr_txt>
]]>

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