Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:55:49 (8439): wrapper (7.7.26015): starting
17:55:49 (8439): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 17:55:49] Arguments: --nthreads 8
[2026-03-12 17:55:49] Threads: 8
[2026-03-12 17:55:49] Checking for CVMFS
[2026-03-12 17:55:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 17:55:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 17:55:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 17:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 17:55:49] 2.11.2.0 22677 124961 131536 157208 0 118 23353977 25165824 694 130560 147 29696725 99.856 18796859 699 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 17:55:49] CVMFS is ok
[2026-03-12 17:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 17:55:49] Checking for apptainer binary...
[2026-03-12 17:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 17:55:49] Running /usr/bin/apptainer --version
[2026-03-12 17:55:49] apptainer version 1.3.2-1.el7
[2026-03-12 17:55:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 17:55:51] cg-vwn370.simple-grid.lan
[2026-03-12 17:55:51] apptainer works
[2026-03-12 17:55:51] Set ATHENA_PROC_NUMBER=8
[2026-03-12 17:55:51] Set ATHENA_CORE_NUMBER=8
[2026-03-12 17:55:51] Starting ATLAS job with PandaID=7050871795
[2026-03-12 17:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 22:44:57]  *** The last 200 lines of the pilot log: ***
[2026-03-12 22:44:57] 2026-03-12 21:43:49,506 | INFO     | total number of processed events: 400 (read)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,509 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7050871795/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,509 | INFO     | extracted standard info from prmon json
[2026-03-12 22:44:57] 2026-03-12 21:43:49,509 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 22:44:57] 2026-03-12 21:43:49,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 22:44:57] 2026-03-12 21:43:49,510 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 22:44:57] 2026-03-12 21:43:49,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 22:44:57] 2026-03-12 21:43:49,516 | INFO     | fitting pss+swap vs Time
[2026-03-12 22:44:57] 2026-03-12 21:43:49,516 | INFO     | sum of square deviations: 7028008982.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,519 | INFO     | sum of deviations: 31405147340.99999
[2026-03-12 22:44:57] 2026-03-12 21:43:49,520 | INFO     | mean x: 1773343200.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,520 | INFO     | mean y: 2464477.780918728
[2026-03-12 22:44:57] 2026-03-12 21:43:49,520 | INFO     | intersect: -7921843050.111823
[2026-03-12 22:44:57] 2026-03-12 21:43:49,520 | INFO     | chi2: 2.2188673032297443
[2026-03-12 22:44:57] 2026-03-12 21:43:49,521 | INFO     | sum of square deviations: 6662039329.5
[2026-03-12 22:44:57] 2026-03-12 21:43:49,523 | INFO     | sum of deviations: 49184130297.999985
[2026-03-12 22:44:57] 2026-03-12 21:43:49,524 | INFO     | mean x: 1773343047.5
[2026-03-12 22:44:57] 2026-03-12 21:43:49,524 | INFO     | mean y: 2471774.870503597
[2026-03-12 22:44:57] 2026-03-12 21:43:49,524 | INFO     | intersect: -13089665812.050413
[2026-03-12 22:44:57] 2026-03-12 21:43:49,524 | INFO     | chi2: 1.4460055210455867
[2026-03-12 22:44:57] 2026-03-12 21:43:49,524 | INFO     | current chi2=1.4460055210455867 (change=34.83136558275448 %)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,525 | INFO     | sum of square deviations: 6309000152.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,527 | INFO     | sum of deviations: 47987757977.000015
[2026-03-12 22:44:57] 2026-03-12 21:43:49,528 | INFO     | mean x: 1773342895.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,528 | INFO     | mean y: 2471258.0293040294
[2026-03-12 22:44:57] 2026-03-12 21:43:49,528 | INFO     | intersect: -13485997216.411232
[2026-03-12 22:44:57] 2026-03-12 21:43:49,528 | INFO     | chi2: 1.4464351688375068
[2026-03-12 22:44:57] 2026-03-12 21:43:49,528 | INFO     | current chi2=1.4464351688375068 (change=-0.029712735232811947 %)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,529 | INFO     | right removable region: 272
[2026-03-12 22:44:57] 2026-03-12 21:43:49,529 | INFO     | sum of square deviations: 6662039329.5
[2026-03-12 22:44:57] 2026-03-12 21:43:49,532 | INFO     | sum of deviations: -9555173071.500002
[2026-03-12 22:44:57] 2026-03-12 21:43:49,532 | INFO     | mean x: 1773343352.5
[2026-03-12 22:44:57] 2026-03-12 21:43:49,532 | INFO     | mean y: 2481397.118705036
[2026-03-12 22:44:57] 2026-03-12 21:43:49,532 | INFO     | intersect: 2545937208.509609
[2026-03-12 22:44:57] 2026-03-12 21:43:49,533 | INFO     | chi2: 0.8271130076501106
[2026-03-12 22:44:57] 2026-03-12 21:43:49,533 | INFO     | current chi2=0.8271130076501106 (change=62.72363802710602 %)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,533 | INFO     | sum of square deviations: 6309000152.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,536 | INFO     | sum of deviations: -7412433360.999996
[2026-03-12 22:44:57] 2026-03-12 21:43:49,536 | INFO     | mean x: 1773343505.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,536 | INFO     | mean y: 2480449.3516483516
[2026-03-12 22:44:57] 2026-03-12 21:43:49,536 | INFO     | intersect: 2085978664.644553
[2026-03-12 22:44:57] 2026-03-12 21:43:49,537 | INFO     | chi2: 0.8103474095138575
[2026-03-12 22:44:57] 2026-03-12 21:43:49,537 | INFO     | current chi2=0.8103474095138575 (change=2.0270021123093467 %)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,537 | INFO     | left removable region: 20
[2026-03-12 22:44:57] 2026-03-12 21:43:49,537 | INFO     | sum of square deviations: 4962187923.0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,540 | INFO     | sum of deviations: 10986618896.500002
[2026-03-12 22:44:57] 2026-03-12 21:43:49,540 | INFO     | mean x: 1773343474.5
[2026-03-12 22:44:57] 2026-03-12 21:43:49,540 | INFO     | mean y: 2487543.98015873
[2026-03-12 22:44:57] 2026-03-12 21:43:49,540 | INFO     | intersect: -3923814568.9691954
[2026-03-12 22:44:57] 2026-03-12 21:43:49,541 | INFO     | chi2: 0.0008081729974983846
[2026-03-12 22:44:57] 2026-03-12 21:43:49,541 | INFO     | current memory leak: 2.21 B/s (using 252 data points, chi2=0.00)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,541 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | ..............................
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . Timing measurements:
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . get job = 0 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . initial setup = 9 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . payload setup = 9 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . stage-in = 0 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . payload execution = 17229 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . stage-out = 4 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | . log creation = 1 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,542 | INFO     | ..............................
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | 
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | job summary report
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | --------------------------------------------------
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | PanDA job id: 7050871795
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | task id: 48967085
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | errors: (none)
[2026-03-12 22:44:57] 2026-03-12 21:43:49,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | pilot state: finished 
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | transexitcode: 0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | exeerrorcode: 0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | exeerrordiag: 
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | exitcode: 0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | exitmsg: OK
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | cpuconsumptiontime: 68538 s
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | nevents: 400
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | neventsw: 0
[2026-03-12 22:44:57] 2026-03-12 21:43:49,663 | INFO     | pid: 16763
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | pgrp: 16763
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | corecount: 8
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | event service: False
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | sizes: {0: 2279809, 1: 2280270, 17243: 2312228, 17244: 2312227, 17249: 2321475}
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | --------------------------------------------------
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | 
[2026-03-12 22:44:57] 2026-03-12 21:43:49,664 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-12 22:44:57] 2026-03-12 21:43:50,081 | INFO     | PID=12307 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 22:44:57] 2026-03-12 21:43:50,082 | INFO     | .. there are 2 such processes running
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | job 7050871795 has completed (purged errors)
[2026-03-12 22:44:57] 2026-03-12 21:43:50,165 | INFO     | overall cleanup function is called
[2026-03-12 22:44:57] 2026-03-12 21:43:51,174 | INFO     | --- collectZombieJob: --- 10, [16763]
[2026-03-12 22:44:57] 2026-03-12 21:43:51,174 | INFO     | zombie collector waiting for pid 16763
[2026-03-12 22:44:57] 2026-03-12 21:43:51,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 22:44:57] 2026-03-12 21:43:51,175 | INFO     | collected zombie processes
[2026-03-12 22:44:57] 2026-03-12 21:43:51,175 | INFO     | will attempt to kill all subprocesses of pid=16763
[2026-03-12 22:44:57] 2026-03-12 21:43:51,237 | INFO     | process IDs to be killed: [16763] (in reverse order)
[2026-03-12 22:44:57] 2026-03-12 21:43:52,307 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 22:44:57] 2026-03-12 21:43:52,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 22:44:57] 2026-03-12 21:43:52,310 | INFO     | did not find any defunct processes belonging to 16763
[2026-03-12 22:44:57] 2026-03-12 21:43:52,311 | INFO     | did not find any defunct processes belonging to 16763
[2026-03-12 22:44:57] 2026-03-12 21:43:52,312 | INFO     | ready for new job
[2026-03-12 22:44:57] 2026-03-12 21:43:52,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 22:44:57] 2026-03-12 21:43:52,314 | INFO     | **************************************
[2026-03-12 22:44:57] 2026-03-12 21:43:52,314 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 22:44:57] 2026-03-12 21:43:52,314 | INFO     | **************************************
[2026-03-12 22:44:57] 2026-03-12 21:43:52,314 | INFO     | 
[2026-03-12 22:44:57] 2026-03-12 21:43:52,315 | INFO     | pilot is running in a VM
[2026-03-12 22:44:57] 2026-03-12 21:43:52,315 | INFO     | architecture information:
[2026-03-12 22:44:57] 2026-03-12 21:43:52,323 | INFO     | executing command: cat /etc/os-release
[2026-03-12 22:44:57] 2026-03-12 21:43:52,681 | INFO     | cat /etc/os-release:
[2026-03-12 22:44:57] NAME="CentOS Linux"
[2026-03-12 22:44:57] VERSION="7 (Core)"
[2026-03-12 22:44:57] ID="centos"
[2026-03-12 22:44:57] ID_LIKE="rhel fedora"
[2026-03-12 22:44:57] VERSION_ID="7"
[2026-03-12 22:44:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 22:44:57] ANSI_COLOR="0;31"
[2026-03-12 22:44:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 22:44:57] HOME_URL="https://www.centos.org/"
[2026-03-12 22:44:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 22:44:57] 
[2026-03-12 22:44:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 22:44:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 22:44:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 22:44:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 22:44:57] 
[2026-03-12 22:44:57] 2026-03-12 21:43:52,681 | INFO     | **************************************
[2026-03-12 22:44:57] 2026-03-12 21:43:53,184 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-12 22:44:57] 2026-03-12 21:43:53,448 | INFO     | sufficient remaining disk space (496967352320 B)
[2026-03-12 22:44:57] 2026-03-12 21:43:53,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 22:44:57] 2026-03-12 21:43:53,448 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 22:44:57] 2026-03-12 21:43:53,448 | INFO     | update_server=False
[2026-03-12 22:44:57] 2026-03-12 21:43:53,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 22:44:57] 2026-03-12 21:43:53,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:44:57] 2026-03-12 21:43:53,449 | INFO     | aborting loop
[2026-03-12 22:44:57] 2026-03-12 21:43:54,184 | INFO     | all data control threads have been joined
[2026-03-12 22:44:57] 2026-03-12 21:43:54,384 | INFO     | all job control threads have been joined
[2026-03-12 22:44:57] 2026-03-12 21:43:54,454 | INFO     | [job] retrieve thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:54,455 | INFO     | [job] job monitor thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:54,597 | INFO     | all payload control threads have been joined
[2026-03-12 22:44:57] 2026-03-12 21:43:54,661 | INFO     | [payload] validate_post thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:54,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 22:44:57] 2026-03-12 21:43:54,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:54,835 | INFO     | [data] copytool_in thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:54,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 22:44:57] 2026-03-12 21:43:55,074 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,109 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,190 | INFO     | [data] control thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,202 | INFO     | [job] validate thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,390 | INFO     | [job] control thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 22:44:57] 2026-03-12 21:43:55,603 | INFO     | [payload] control thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,623 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,685 | INFO     | [job] queue monitor thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:55,715 | INFO     | [payload] failed_post thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:56,906 | INFO     | [data] copytool_out thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:43:59,527 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 22:44:57] 2026-03-12 21:44:22,208 | INFO     | PID=12307 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 22:44:57] 2026-03-12 21:44:22,208 | INFO     | .. there are 2 such processes running
[2026-03-12 22:44:57] 2026-03-12 21:44:22,210 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 22:44:57] 2026-03-12 21:44:22,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 22:44:57] 2026-03-12 21:44:22,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 22:44:57] 2026-03-12 21:44:48,620 | INFO     | [monitor] cgroup control has ended
[2026-03-12 22:44:57] 2026-03-12 21:44:48,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742720005952)>', '<ExcThread(monitor, started 139742045787904)>']
[2026-03-12 22:44:57] 2026-03-12 21:44:49,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 22:44:57] 2026-03-12 21:44:49,371 | INFO     | [monitor] control thread has ended
[2026-03-12 22:44:57] 2026-03-12 21:44:53,865 | INFO     | all workflow threads have been joined
[2026-03-12 22:44:57] 2026-03-12 21:44:53,866 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 22:44:57] 2026-03-12 21:44:53,866 | INFO     | traces error code: 0
[2026-03-12 22:44:57] 2026-03-12 21:44:53,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 22:44:57] 2026-03-12 21:44:54,287 [wrapper] ==== pilot stdout END ====
[2026-03-12 22:44:57] 2026-03-12 21:44:54,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 22:44:57] 2026-03-12 21:44:54,477 [wrapper] pilotpid: 12307
[2026-03-12 22:44:57] 2026-03-12 21:44:54,549 [wrapper] Pilot exit status: 0
[2026-03-12 22:44:57] 2026-03-12 21:44:55,102 [wrapper] pandaids: 7050871795
[2026-03-12 22:44:57] 2026-03-12 21:44:55,270 [wrapper] cleanup supervisor_pilot  5855 12308
[2026-03-12 22:44:57] 2026-03-12 21:44:55,289 [wrapper] Test setup, not cleaning
[2026-03-12 22:44:57] 2026-03-12 21:44:55,294 [wrapper] apfmon messages muted
[2026-03-12 22:44:57] 2026-03-12 21:44:55,354 [wrapper] ==== wrapper stdout END ====
[2026-03-12 22:44:57] 2026-03-12 21:44:55,425 [wrapper] ==== wrapper stderr END ====
[2026-03-12 22:44:57]  *** Error codes and diagnostics ***
[2026-03-12 22:44:57]     "exeErrorCode": 0,
[2026-03-12 22:44:57]     "exeErrorDiag": "",
[2026-03-12 22:44:57]     "pilotErrorCode": 0,
[2026-03-12 22:44:57]     "pilotErrorDiag": "",
[2026-03-12 22:44:57]  *** Listing of results directory ***
[2026-03-12 22:44:57] total 404836
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-12 22:44:57] -rwx------. 1 boinc boinc     36322 Mar 12 03:14 runpilot2-wrapper.sh
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc      5111 Mar 12 03:14 queuedata.json
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc       100 Mar 12 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 22:44:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 17:55 run_atlas
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc       105 Mar 12 17:55 job.xml
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc      6391 Mar 12 17:55 init_data.xml
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc 211755050 Mar 12 17:55 EVNT.48967083._000551.pool.root.1
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc     15845 Mar 12 17:55 start_atlas.sh
[2026-03-12 22:44:57] drwxrwx--x. 2 boinc boinc        68 Mar 12 17:55 shared
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc    597523 Mar 12 17:55 input.tar.gz
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc         0 Mar 12 17:55 boinc_lockfile
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc      2563 Mar 12 17:55 pandaJob.out
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc   1006536 Mar 12 17:56 agis_schedconf.cvmfs.json
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc       415 Mar 12 17:56 workernode_map.json
[2026-03-12 22:44:57] drwx------. 5 boinc boinc      4096 Mar 12 17:56 pilot3
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc 192991640 Mar 12 22:42 HITS.48967085._013448.pool.root.1
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc       530 Mar 12 22:42 boinc_task_state.xml
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc      1021 Mar 12 22:43 memory_monitor_summary.json
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc   1511578 Mar 12 22:43 agis_ddmendpoints.agis.ALL.json
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc    515044 Mar 12 22:43 log.48967085._013448.job.log.tgz.1
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc      6321 Mar 12 22:43 heartbeat.json
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc        95 Mar 12 22:44 pilot_heartbeat.json
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc      8192 Mar 12 22:44 boinc_mmap_file
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc        28 Mar 12 22:44 wrapper_checkpoint.txt
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc      4880 Mar 12 22:44 pilotlog.txt
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc   2422627 Mar 12 22:44 log.48967085._013448.job.log.1
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc       357 Mar 12 22:44 output.list
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc       620 Mar 12 22:44 runtime_log
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc   2959360 Mar 12 22:44 result.tar.gz
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc      8816 Mar 12 22:44 runtime_log.err
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc       656 Mar 12 22:44 okILDmokkK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhhlLDmF5xh3m.diag
[2026-03-12 22:44:57] -rw-r--r--. 1 boinc boinc     20785 Mar 12 22:44 stderr.txt
[2026-03-12 22:44:57] HITS file was successfully produced:
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc 192991640 Mar 12 22:42 shared/HITS.pool.root.1
[2026-03-12 22:44:57]  *** Contents of shared directory: ***
[2026-03-12 22:44:57] total 398760
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc 211755050 Mar 12 17:55 ATLAS.root_0
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc     15845 Mar 12 17:55 start_atlas.sh
[2026-03-12 22:44:57] -rw-r--r--. 2 boinc boinc    597523 Mar 12 17:55 input.tar.gz
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc 192991640 Mar 12 22:42 HITS.pool.root.1
[2026-03-12 22:44:57] -rw-------. 1 boinc boinc   2959360 Mar 12 22:44 result.tar.gz
22:44:59 (8439): run_atlas exited; CPU time 68702.335760
22:44:59 (8439): called boinc_finish(0)

</stderr_txt>
]]>

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