Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:08:45 (6866): wrapper (7.7.26015): starting
22:08:45 (6866): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 22:08:45] Arguments: --nthreads 12
[2026-03-11 22:08:45] Threads: 12
[2026-03-11 22:08:45] Checking for CVMFS
[2026-03-11 22:08:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 22:08:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 22:08:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 22:08:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 22:08:45] 2.11.2.0 2987 439656 99152 157178 2 50 12455969 20275200 1 130560 1 189592928 99.950 26019695 16976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 22:08:45] CVMFS is ok
[2026-03-11 22:08:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 22:08:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 22:08:45] Further information can be found at the LHC@home message board.
[2026-03-11 22:08:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 22:08:45] Checking for apptainer binary...
[2026-03-11 22:08:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 22:08:45] Running /usr/bin/apptainer --version
[2026-03-11 22:08:45] apptainer version 1.3.2-1.el7
[2026-03-11 22:08:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 22:08:47] c-205-19.aglt2.org
[2026-03-11 22:08:47] apptainer works
[2026-03-11 22:08:47] Set ATHENA_PROC_NUMBER=12
[2026-03-11 22:08:47] Set ATHENA_CORE_NUMBER=12
[2026-03-11 22:08:47] Starting ATLAS job with PandaID=7036809563
[2026-03-11 22:08:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 23:26:43]  *** The last 200 lines of the pilot log: ***
[2026-03-11 23:26:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 23:26:43]  is_altstaged=None
[2026-03-11 23:26:43]  is_tar=False
[2026-03-11 23:26:43]  lfn=log.48868979._001430.job.log.tgz.1
[2026-03-11 23:26:43]  mtime=0
[2026-03-11 23:26:43]  protocol_id=None
[2026-03-11 23:26:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 23:26:43]  replicas=None
[2026-03-11 23:26:43]  scope=mc23_13p6TeV
[2026-03-11 23:26:43]  status=None
[2026-03-11 23:26:43]  status_code=0
[2026-03-11 23:26:43]  storage_token=
[2026-03-11 23:26:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036809563/log.48868979._001430.job.log.tgz.1
[2026-03-11 23:26:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/3b/log.48868979._001430.job.log.tgz.1
[2026-03-11 23:26:43]  workdir=None
[2026-03-11 23:26:43] ]
[2026-03-11 23:26:43] 2026-03-12 03:26:06,872 | INFO     | transferring file log.48868979._001430.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036809563/log.48868979._001430.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-11 23:26:43] 2026-03-12 03:26:06,873 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036809563/log.48868979._001430.job.log.tgz.1 /tmp/boinchome/slots/0/log.48868979._001430.job
[2026-03-11 23:26:43] 2026-03-12 03:26:06,895 | INFO     | adding to output.list: log.48868979._001430.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/3b/log.48868979._001430.job.log.tg
[2026-03-11 23:26:43] 2026-03-12 03:26:06,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 23:26:43] 2026-03-12 03:26:06,896 | INFO     | summary of transferred files:
[2026-03-11 23:26:43] 2026-03-12 03:26:06,896 | INFO     |  -- lfn=log.48868979._001430.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 23:26:43] 2026-03-12 03:26:06,896 | INFO     | stage-out finished correctly
[2026-03-11 23:26:43] 2026-03-12 03:26:08,007 | INFO     | time since job start (4621s) is within the limit (349056.0s)
[2026-03-11 23:26:43] 2026-03-12 03:26:08,322 | INFO     | monitor loop #351: job 0:7036809563 is in state 'finished'
[2026-03-11 23:26:43] 2026-03-12 03:26:08,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 23:26:43] 2026-03-12 03:26:08,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 23:26:43] 2026-03-12 03:26:10,013 | INFO     | time since job start (4623s) is within the limit (349056.0s)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,834 | INFO     | monitor loop #352: job 0:7036809563 is in state 'finished'
[2026-03-11 23:26:43] 2026-03-12 03:26:10,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,873 | INFO     | job 7036809563 has state=finished
[2026-03-11 23:26:43] 2026-03-12 03:26:10,873 | INFO     | preparing for final server update for job 7036809563 in state='finished'
[2026-03-11 23:26:43] 2026-03-12 03:26:10,873 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036809563/jobReport.json
[2026-03-11 23:26:43] 2026-03-12 03:26:10,876 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-11 23:26:43] 2026-03-12 03:26:10,877 | INFO     | this job has now completed (state=finished)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,877 | INFO     | log transfer has been attempted: DONE
[2026-03-11 23:26:43] 2026-03-12 03:26:10,877 | INFO     | job 7036809563 has finished - writing final server update
[2026-03-11 23:26:43] 2026-03-12 03:26:10,877 | INFO     | total number of processed events: 400 (read)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,879 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036809563/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,879 | INFO     | extracted standard info from prmon json
[2026-03-11 23:26:43] 2026-03-12 03:26:10,880 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 23:26:43] 2026-03-12 03:26:10,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 23:26:43] 2026-03-12 03:26:10,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 23:26:43] 2026-03-12 03:26:10,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 23:26:43] 2026-03-12 03:26:10,881 | INFO     | fitting pss+swap vs Time
[2026-03-11 23:26:43] 2026-03-12 03:26:10,882 | INFO     | sum of square deviations: 101843770.0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,882 | INFO     | sum of deviations: -1378072228.0000002
[2026-03-11 23:26:43] 2026-03-12 03:26:10,882 | INFO     | mean x: 1773283750.0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,882 | INFO     | mean y: 2704205.84057971
[2026-03-11 23:26:43] 2026-03-12 03:26:10,882 | INFO     | intersect: 23997427577.12481
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | chi2: 0.03519686415152818
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | current memory leak: -13.53 B/s (using 69 data points, chi2=0.04)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | could have reported an average CPU frequency of 1706 MHz (6 samples)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | ..............................
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | . Timing measurements:
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | . get job = 0 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,883 | INFO     | . initial setup = 7 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | . payload setup = 7 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | . stage-in = 0 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | . payload execution = 4596 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | . stage-out = 0 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | . log creation = 0 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,884 | INFO     | ..............................
[2026-03-11 23:26:43] 2026-03-12 03:26:10,960 | INFO     | 
[2026-03-11 23:26:43] 2026-03-12 03:26:10,960 | INFO     | job summary report
[2026-03-11 23:26:43] 2026-03-12 03:26:10,960 | INFO     | --------------------------------------------------
[2026-03-11 23:26:43] 2026-03-12 03:26:10,960 | INFO     | PanDA job id: 7036809563
[2026-03-11 23:26:43] 2026-03-12 03:26:10,960 | INFO     | task id: 48868979
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | errors: (none)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | pilot state: finished 
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | transexitcode: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | exeerrorcode: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,961 | INFO     | exeerrordiag: 
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | exitcode: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | exitmsg: OK
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | cpuconsumptiontime: 50936 s
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | nevents: 400
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | neventsw: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,962 | INFO     | pid: 14973
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | pgrp: 14973
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | corecount: 12
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | event service: False
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | sizes: {0: 2280016, 1: 2280222, 11: 2280250, 4607: 2306399, 4608: 2315397, 4610: 2315453, 4612: 2315775}
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | --------------------------------------------------
[2026-03-11 23:26:43] 2026-03-12 03:26:10,963 | INFO     | 
[2026-03-11 23:26:43] 2026-03-12 03:26:10,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-11 23:26:43] 2026-03-12 03:26:10,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 23:26:43] 2026-03-12 03:26:10,993 | INFO     | job 7036809563 has completed (purged errors)
[2026-03-11 23:26:43] 2026-03-12 03:26:10,993 | INFO     | overall cleanup function is called
[2026-03-11 23:26:43] 2026-03-12 03:26:12,001 | INFO     | --- collectZombieJob: --- 10, [14973]
[2026-03-11 23:26:43] 2026-03-12 03:26:12,001 | INFO     | zombie collector waiting for pid 14973
[2026-03-11 23:26:43] 2026-03-12 03:26:12,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 23:26:43] 2026-03-12 03:26:12,002 | INFO     | collected zombie processes
[2026-03-11 23:26:43] 2026-03-12 03:26:12,002 | INFO     | will attempt to kill all subprocesses of pid=14973
[2026-03-11 23:26:43] 2026-03-12 03:26:12,093 | INFO     | process IDs to be killed: [14973] (in reverse order)
[2026-03-11 23:26:43] 2026-03-12 03:26:12,147 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 23:26:43] 2026-03-12 03:26:12,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 23:26:43] 2026-03-12 03:26:12,151 | INFO     | did not find any defunct processes belonging to 14973
[2026-03-11 23:26:43] 2026-03-12 03:26:12,155 | INFO     | did not find any defunct processes belonging to 14973
[2026-03-11 23:26:43] 2026-03-12 03:26:12,155 | INFO     | ready for new job
[2026-03-11 23:26:43] 2026-03-12 03:26:12,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 23:26:43] 2026-03-12 03:26:12,157 | INFO     | **************************************
[2026-03-11 23:26:43] 2026-03-12 03:26:12,157 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 23:26:43] 2026-03-12 03:26:12,157 | INFO     | **************************************
[2026-03-11 23:26:43] 2026-03-12 03:26:12,157 | INFO     | 
[2026-03-11 23:26:43] 2026-03-12 03:26:12,158 | INFO     | architecture information:
[2026-03-11 23:26:43] 2026-03-12 03:26:12,158 | INFO     | executing command: cat /etc/os-release
[2026-03-11 23:26:43] 2026-03-12 03:26:12,175 | INFO     | cat /etc/os-release:
[2026-03-11 23:26:43] NAME="CentOS Linux"
[2026-03-11 23:26:43] VERSION="7 (Core)"
[2026-03-11 23:26:43] ID="centos"
[2026-03-11 23:26:43] ID_LIKE="rhel fedora"
[2026-03-11 23:26:43] VERSION_ID="7"
[2026-03-11 23:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 23:26:43] ANSI_COLOR="0;31"
[2026-03-11 23:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 23:26:43] HOME_URL="https://www.centos.org/"
[2026-03-11 23:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 23:26:43] 
[2026-03-11 23:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 23:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 23:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 23:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 23:26:43] 
[2026-03-11 23:26:43] 2026-03-12 03:26:12,176 | INFO     | **************************************
[2026-03-11 23:26:43] 2026-03-12 03:26:12,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-11 23:26:43] 2026-03-12 03:26:12,695 | INFO     | sufficient remaining disk space (29170335744 B)
[2026-03-11 23:26:43] 2026-03-12 03:26:12,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 23:26:43] 2026-03-12 03:26:12,696 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 23:26:43] 2026-03-12 03:26:12,696 | INFO     | update_server=False
[2026-03-11 23:26:43] 2026-03-12 03:26:12,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 23:26:43] 2026-03-12 03:26:12,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 23:26:43] 2026-03-12 03:26:12,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 23:26:43] 2026-03-12 03:26:12,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 23:26:43] 2026-03-12 03:26:12,698 | INFO     | aborting loop
[2026-03-11 23:26:43] 2026-03-12 03:26:13,200 | INFO     | all data control threads have been joined
[2026-03-11 23:26:43] 2026-03-12 03:26:13,250 | INFO     | all payload control threads have been joined
[2026-03-11 23:26:43] 2026-03-12 03:26:13,612 | INFO     | all job control threads have been joined
[2026-03-11 23:26:43] 2026-03-12 03:26:13,698 | INFO     | [job] retrieve thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:13,703 | INFO     | [job] queue monitor thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:13,703 | INFO     | [job] job monitor thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,161 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,206 | INFO     | [data] control thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,255 | INFO     | [payload] control thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,455 | INFO     | [payload] failed_post thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,475 | INFO     | [job] validate thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 23:26:43] 2026-03-12 03:26:14,613 | INFO     | [job] control thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,655 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,691 | INFO     | [monitor] cgroup control has ended
[2026-03-11 23:26:43] 2026-03-12 03:26:14,702 | INFO     | [data] copytool_out thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,708 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:14,709 | INFO     | [data] copytool_in thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:15,041 | INFO     | [payload] validate_post thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:18,490 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:23,687 | INFO     | job.realtimelogging is not enabled
[2026-03-11 23:26:43] 2026-03-12 03:26:24,692 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 23:26:43] 2026-03-12 03:26:26,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281070249792)>', '<ExcThread(monitor, started 140280317593344)>']
[2026-03-11 23:26:43] 2026-03-12 03:26:31,413 | INFO     | all workflow threads have been joined
[2026-03-11 23:26:43] 2026-03-12 03:26:31,413 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 23:26:43] 2026-03-12 03:26:31,414 | INFO     | traces error code: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:31,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 23:26:43] 2026-03-12 03:26:42,090 | INFO     | 4631s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-11 23:26:43] 2026-03-12 03:26:43,208 | INFO     | PID=10549 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-11 23:26:43] 2026-03-12 03:26:43,208 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 23:26:43] 2026-03-12 03:26:43,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 23:26:43] 2026-03-12 03:26:43,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 23:26:43] 2026-03-12 03:26:43,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 23:26:43] 2026-03-12 03:26:43,219 | INFO     | [monitor] control thread has ended
[2026-03-11 23:26:43] 2026-03-12 03:26:43,317 [wrapper] ==== pilot stdout END ====
[2026-03-11 23:26:43] 2026-03-12 03:26:43,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 23:26:43] 2026-03-12 03:26:43,325 [wrapper] pilotpid: 10549
[2026-03-11 23:26:43] 2026-03-12 03:26:43,328 [wrapper] Pilot exit status: 0
[2026-03-11 23:26:43] 2026-03-12 03:26:43,344 [wrapper] pandaids: 7036809563
[2026-03-11 23:26:43] 2026-03-12 03:26:43,384 [wrapper] cleanup supervisor_pilot  4905 10550
[2026-03-11 23:26:43] 2026-03-12 03:26:43,388 [wrapper] Test setup, not cleaning
[2026-03-11 23:26:43] 2026-03-12 03:26:43,392 [wrapper] apfmon messages muted
[2026-03-11 23:26:43] 2026-03-12 03:26:43,396 [wrapper] ==== wrapper stdout END ====
[2026-03-11 23:26:43] 2026-03-12 03:26:43,400 [wrapper] ==== wrapper stderr END ====
[2026-03-11 23:26:43]  *** Error codes and diagnostics ***
[2026-03-11 23:26:43]     "exeErrorCode": 0,
[2026-03-11 23:26:43]     "exeErrorDiag": "",
[2026-03-11 23:26:43]     "pilotErrorCode": 0,
[2026-03-11 23:26:43]     "pilotErrorDiag": "",
[2026-03-11 23:26:43]  *** Listing of results directory ***
[2026-03-11 23:26:43] total 498396
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 18:05 pilot3.tar.gz
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 18:13 queuedata.json
[2026-03-11 23:26:43] -rwx------ 1 boincer umatlas     36322 Mar  3 18:14 runpilot2-wrapper.sh
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas       100 Mar 11 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 23:26:43] -rwxr-xr-x 1 boincer umatlas      7986 Mar 11 22:08 run_atlas
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas       105 Mar 11 22:08 job.xml
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas 295323049 Mar 11 22:08 EVNT.48717036._000058.pool.root.1
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 22:08 start_atlas.sh
[2026-03-11 23:26:43] drwxrwx--x 2 boincer umatlas      4096 Mar 11 22:08 shared
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas    597967 Mar 11 22:08 input.tar.gz
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas         0 Mar 11 22:08 boinc_lockfile
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas      2596 Mar 11 22:08 pandaJob.out
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas        57 Mar 11 22:08 setup.sh.local
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas   1006235 Mar 11 22:09 agis_schedconf.cvmfs.json
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas   1511578 Mar 11 22:09 agis_ddmendpoints.agis.ALL.json
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas       445 Mar 11 22:09 workernode_map.json
[2026-03-11 23:26:43] drwx------ 5 boincer umatlas      4096 Mar 11 22:09 pilot3
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas      5953 Mar 11 23:19 init_data.xml
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas 208999863 Mar 11 23:25 HITS.48868979._001430.pool.root.1
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas       529 Mar 11 23:25 boinc_task_state.xml
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas      1046 Mar 11 23:26 memory_monitor_summary.json
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas        95 Mar 11 23:26 pilot_heartbeat.json
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas    375219 Mar 11 23:26 log.48868979._001430.job.log.tgz.1
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas      6415 Mar 11 23:26 heartbeat.json
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas      8192 Mar 11 23:26 boinc_mmap_file
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas        27 Mar 11 23:26 wrapper_checkpoint.txt
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas       860 Mar 11 23:26 pilotlog.txt
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas    672735 Mar 11 23:26 log.48868979._001430.job.log.1
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas       357 Mar 11 23:26 output.list
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas       620 Mar 11 23:26 runtime_log
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas   1064960 Mar 11 23:26 result.tar.gz
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas      9343 Mar 11 23:26 runtime_log.err
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas       659 Mar 11 23:26 F6bKDmP7nH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTMGLDmeLkmJm.diag
[2026-03-11 23:26:43] -rw-r--r-- 1 boincer umatlas     21450 Mar 11 23:26 stderr.txt
[2026-03-11 23:26:43] HITS file was successfully produced:
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas 208999863 Mar 11 23:25 shared/HITS.pool.root.1
[2026-03-11 23:26:43]  *** Contents of shared directory: ***
[2026-03-11 23:26:43] total 494156
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas 295323049 Mar 11 22:08 ATLAS.root_0
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 22:08 start_atlas.sh
[2026-03-11 23:26:43] -rw-r--r-- 2 boincer umatlas    597967 Mar 11 22:08 input.tar.gz
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas 208999863 Mar 11 23:25 HITS.pool.root.1
[2026-03-11 23:26:43] -rw------- 1 boincer umatlas   1064960 Mar 11 23:26 result.tar.gz
23:26:44 (6866): run_atlas exited; CPU time 50916.552066
23:26:44 (6866): called boinc_finish(0)

</stderr_txt>
]]>

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