Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:40 (12833): wrapper (7.7.26015): starting
11:19:40 (12833): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 11:19:40] Arguments: --nthreads 4
[2026-03-13 11:19:40] Threads: 4
[2026-03-13 11:19:40] Checking for CVMFS
[2026-03-13 11:19:40] No cvmfs_config command found, will try listing directly
[2026-03-13 11:19:40] CVMFS is ok
[2026-03-13 11:19:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 11:19:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 11:19:40] Further information can be found at the LHC@home message board.
[2026-03-13 11:19:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 11:19:40] Checking for apptainer binary...
[2026-03-13 11:19:40] which: no apptainer in ((null))
[2026-03-13 11:19:40] apptainer is not installed, using version from CVMFS
[2026-03-13 11:19:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 11:19:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-13 11:19:40] apptainer works
[2026-03-13 11:19:40] Set ATHENA_PROC_NUMBER=4
[2026-03-13 11:19:40] Set ATHENA_CORE_NUMBER=4
[2026-03-13 11:19:40] Starting ATLAS job with PandaID=7050361720
[2026-03-13 11:19:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 14:25:17]  *** The last 200 lines of the pilot log: ***
[2026-03-13 14:25:17] 2026-03-13 13:24:24,282 | INFO     | total number of processed events: 400 (read)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7050361720/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | INFO     | extracted standard info from prmon json
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 14:25:17] 2026-03-13 13:24:24,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 14:25:17] 2026-03-13 13:24:24,302 | INFO     | fitting pss+swap vs Time
[2026-03-13 14:25:17] 2026-03-13 13:24:24,302 | INFO     | sum of square deviations: 1869302025.5
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | sum of deviations: 5088439256.999998
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | mean x: 1773402736.5
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | mean y: 2322119.89010989
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | intersect: -4825069055.949508
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | chi2: 1.8232764539094086
[2026-03-13 14:25:17] 2026-03-13 13:24:24,303 | INFO     | sum of square deviations: 1719429448.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | sum of deviations: 15934337223.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | mean x: 1773402584.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | mean y: 2332903.1242937855
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | intersect: -16432185441.58861
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | chi2: 1.0623615880217623
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | current chi2=1.0623615880217623 (change=41.73337862484419 %)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,304 | INFO     | sum of square deviations: 1577789583.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | sum of deviations: 15423662181.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | mean x: 1773402431.5
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | mean y: 2332353.2558139535
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | intersect: -17333540762.6082
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | chi2: 1.0630431761315327
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | current chi2=1.0630431761315327 (change=-0.06415782700121571 %)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | right removable region: 171
[2026-03-13 14:25:17] 2026-03-13 13:24:24,305 | INFO     | sum of square deviations: 1719429448.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | sum of deviations: -10345157567.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | mean x: 1773402889.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | mean y: 2337508.0790960453
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | intersect: 10672232884.0236
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | chi2: 0.7796159455280255
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | current chi2=0.7796159455280255 (change=57.24093601623611 %)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,306 | INFO     | sum of square deviations: 1577789583.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | sum of deviations: -10062973152.999998
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | mean x: 1773403041.5
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | mean y: 2337205.7093023257
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | intersect: 11312912068.37972
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | chi2: 0.7799551889276887
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | current chi2=0.7799551889276887 (change=-0.04351416894550748 %)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | left removable region: 20
[2026-03-13 14:25:17] 2026-03-13 13:24:24,307 | INFO     | sum of square deviations: 1067554900.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | sum of deviations: 1188116825.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | mean x: 1773403011.0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | mean y: 2348062.5298013245
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | intersect: -1971330251.2269528
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | chi2: 0.0004137607464050983
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | current memory leak: 1.11 B/s (using 151 data points, chi2=0.00)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | could have reported an average CPU frequency of 3535 MHz (10 samples)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | ..............................
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . Timing measurements:
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . get job = 0 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . initial setup = 5 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . payload setup = 5 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . stage-in = 0 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . payload execution = 11047 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . stage-out = 0 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | . log creation = 0 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,308 | INFO     | ..............................
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | 
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | job summary report
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | --------------------------------------------------
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | PanDA job id: 7050361720
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | task id: 48967067
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | errors: (none)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | pilot state: finished 
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | transexitcode: 0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | exeerrorcode: 0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | exeerrordiag: 
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | exitcode: 0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | exitmsg: OK
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | cpuconsumptiontime: 42903 s
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | nevents: 400
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | neventsw: 0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | pid: 34328
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | pgrp: 34328
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | corecount: 4
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | event service: False
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | sizes: {0: 2280030, 1: 2280292, 11: 2280320, 11056: 2309548, 11057: 2318570, 11059: 2318948}
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | --------------------------------------------------
[2026-03-13 14:25:17] 2026-03-13 13:24:24,360 | INFO     | 
[2026-03-13 14:25:17] 2026-03-13 13:24:24,361 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-03-13 14:25:17] 2026-03-13 13:24:24,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | job 7050361720 has completed (purged errors)
[2026-03-13 14:25:17] 2026-03-13 13:24:24,378 | INFO     | overall cleanup function is called
[2026-03-13 14:25:17] 2026-03-13 13:24:25,385 | INFO     | --- collectZombieJob: --- 10, [34328]
[2026-03-13 14:25:17] 2026-03-13 13:24:25,385 | INFO     | zombie collector waiting for pid 34328
[2026-03-13 14:25:17] 2026-03-13 13:24:25,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 14:25:17] 2026-03-13 13:24:25,385 | INFO     | collected zombie processes
[2026-03-13 14:25:17] 2026-03-13 13:24:25,385 | INFO     | will attempt to kill all subprocesses of pid=34328
[2026-03-13 14:25:17] 2026-03-13 13:24:25,847 | INFO     | process IDs to be killed: [34328] (in reverse order)
[2026-03-13 14:25:17] 2026-03-13 13:24:26,076 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 14:25:17] 2026-03-13 13:24:26,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 14:25:17] 2026-03-13 13:24:26,104 | INFO     | did not find any defunct processes belonging to 34328
[2026-03-13 14:25:17] 2026-03-13 13:24:26,130 | INFO     | did not find any defunct processes belonging to 34328
[2026-03-13 14:25:17] 2026-03-13 13:24:26,131 | INFO     | ready for new job
[2026-03-13 14:25:17] 2026-03-13 13:24:26,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 14:25:17] 2026-03-13 13:24:26,132 | INFO     | **************************************
[2026-03-13 14:25:17] 2026-03-13 13:24:26,132 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 14:25:17] 2026-03-13 13:24:26,132 | INFO     | **************************************
[2026-03-13 14:25:17] 2026-03-13 13:24:26,132 | INFO     | 
[2026-03-13 14:25:17] 2026-03-13 13:24:26,138 | INFO     | architecture information:
[2026-03-13 14:25:17] 2026-03-13 13:24:26,138 | INFO     | executing command: cat /etc/os-release
[2026-03-13 14:25:17] 2026-03-13 13:24:26,149 | INFO     | cat /etc/os-release:
[2026-03-13 14:25:17] NAME="CentOS Linux"
[2026-03-13 14:25:17] VERSION="7 (Core)"
[2026-03-13 14:25:17] ID="centos"
[2026-03-13 14:25:17] ID_LIKE="rhel fedora"
[2026-03-13 14:25:17] VERSION_ID="7"
[2026-03-13 14:25:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 14:25:17] ANSI_COLOR="0;31"
[2026-03-13 14:25:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 14:25:17] HOME_URL="https://www.centos.org/"
[2026-03-13 14:25:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 14:25:17] 
[2026-03-13 14:25:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 14:25:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 14:25:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 14:25:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 14:25:17] 
[2026-03-13 14:25:17] 2026-03-13 13:24:26,149 | INFO     | **************************************
[2026-03-13 14:25:17] 2026-03-13 13:24:26,651 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | INFO     | sufficient remaining disk space (20661141504 B)
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | INFO     | update_server=False
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 14:25:17] 2026-03-13 13:24:26,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 14:25:17] 2026-03-13 13:24:26,728 | INFO     | all payload control threads have been joined
[2026-03-13 14:25:17] 2026-03-13 13:24:26,861 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 14:25:17] 2026-03-13 13:24:26,861 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 14:25:17] 2026-03-13 13:24:26,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:25:17] 2026-03-13 13:24:26,861 | INFO     | will abort loop
[2026-03-13 14:25:17] 2026-03-13 13:24:27,293 | INFO     | all job control threads have been joined
[2026-03-13 14:25:17] 2026-03-13 13:24:27,394 | INFO     | all data control threads have been joined
[2026-03-13 14:25:17] 2026-03-13 13:24:27,675 | INFO     | [job] retrieve thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:27,686 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:27,734 | INFO     | [payload] control thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:27,866 | INFO     | [job] job monitor thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:27,915 | INFO     | [data] copytool_in thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 14:25:17] 2026-03-13 13:24:28,089 | INFO     | [payload] failed_post thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,298 | INFO     | [job] control thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,399 | INFO     | [data] control thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,686 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,759 | INFO     | [job] validate thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:28,769 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:29,117 | INFO     | [payload] validate_post thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:29,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:25:17] 2026-03-13 13:24:30,039 | INFO     | [data] copytool_out thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:30,374 | INFO     | [job] queue monitor thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:30,676 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:37,395 | INFO     | job.realtimelogging is not enabled
[2026-03-13 14:25:17] 2026-03-13 13:24:38,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 14:25:17] 2026-03-13 13:24:57,595 | INFO     | PID=22324 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-13 14:25:17] 2026-03-13 13:24:57,595 | INFO     | .. there are 44 such processes running
[2026-03-13 14:25:17] 2026-03-13 13:24:57,595 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 14:25:17] 2026-03-13 13:24:57,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 14:25:17] 2026-03-13 13:24:57,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 14:25:17] 2026-03-13 13:25:12,285 | INFO     | [monitor] cgroup control has ended
[2026-03-13 14:25:17] 2026-03-13 13:25:12,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23083521357632)>', '<ExcThread(monitor, started 23083277879040)>']
[2026-03-13 14:25:17] 2026-03-13 13:25:12,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 14:25:17] 2026-03-13 13:25:12,665 | INFO     | [monitor] control thread has ended
[2026-03-13 14:25:17] 2026-03-13 13:25:17,345 | INFO     | all workflow threads have been joined
[2026-03-13 14:25:17] 2026-03-13 13:25:17,345 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 14:25:17] 2026-03-13 13:25:17,345 | INFO     | traces error code: 0
[2026-03-13 14:25:17] 2026-03-13 13:25:17,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 14:25:17] 2026-03-13 13:25:17,472 [wrapper] ==== pilot stdout END ====
[2026-03-13 14:25:17] 2026-03-13 13:25:17,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 14:25:17] 2026-03-13 13:25:17,478 [wrapper] pilotpid: 22324
[2026-03-13 14:25:17] 2026-03-13 13:25:17,480 [wrapper] Pilot exit status: 0
[2026-03-13 14:25:17] 2026-03-13 13:25:17,489 [wrapper] pandaids: 7050361720
[2026-03-13 14:25:17] 2026-03-13 13:25:17,629 [wrapper] cleanup supervisor_pilot 1454595 22325
[2026-03-13 14:25:17] 2026-03-13 13:25:17,631 [wrapper] Test setup, not cleaning
[2026-03-13 14:25:17] 2026-03-13 13:25:17,634 [wrapper] apfmon messages muted
[2026-03-13 14:25:17] 2026-03-13 13:25:17,636 [wrapper] ==== wrapper stdout END ====
[2026-03-13 14:25:17] 2026-03-13 13:25:17,638 [wrapper] ==== wrapper stderr END ====
[2026-03-13 14:25:17]  *** Error codes and diagnostics ***
[2026-03-13 14:25:17]     "exeErrorCode": 0,
[2026-03-13 14:25:17]     "exeErrorDiag": "",
[2026-03-13 14:25:17]     "pilotErrorCode": 0,
[2026-03-13 14:25:17]     "pilotErrorDiag": "",
[2026-03-13 14:25:17]  *** Listing of results directory ***
[2026-03-13 14:25:17] total 506368
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc      5111 Mar 11 22:07 queuedata.json
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc    585013 Mar 11 22:07 pilot3.tar.gz
[2026-03-13 14:25:17] -rwx------. 1 boinc boinc     36322 Mar 11 22:07 runpilot2-wrapper.sh
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc       100 Mar 13 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 14:25:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 11:19 run_atlas
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc       105 Mar 13 11:19 job.xml
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:19 start_atlas.sh
[2026-03-13 14:25:17] drwxrwx--x. 2 boinc boinc      4096 Mar 13 11:19 shared
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc    597545 Mar 13 11:19 input.tar.gz
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc      6709 Mar 13 11:19 init_data.xml
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc 234691222 Mar 13 11:19 EVNT.48967065._000060.pool.root.1
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc         0 Mar 13 11:19 boinc_lockfile
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc      2614 Mar 13 11:19 pandaJob.out
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc   1006495 Mar 13 11:19 agis_schedconf.cvmfs.json
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc       444 Mar 13 11:19 workernode_map.json
[2026-03-13 14:25:17] drwx------. 5 boinc boinc      4096 Mar 13 11:19 pilot3
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc 276078043 Mar 13 14:23 HITS.48967067._001494.pool.root.1
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc       529 Mar 13 14:23 boinc_task_state.xml
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc        95 Mar 13 14:24 pilot_heartbeat.json
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc      1047 Mar 13 14:24 memory_monitor_summary.json
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc   1511578 Mar 13 14:24 agis_ddmendpoints.agis.ALL.json
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc    353724 Mar 13 14:24 log.48967067._001494.job.log.tgz.1
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc      6360 Mar 13 14:24 heartbeat.json
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc      8192 Mar 13 14:24 boinc_mmap_file
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc        27 Mar 13 14:24 wrapper_checkpoint.txt
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc      5086 Mar 13 14:25 pilotlog.txt
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc   1554895 Mar 13 14:25 log.48967067._001494.job.log.1
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc       357 Mar 13 14:25 output.list
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc       620 Mar 13 14:25 runtime_log
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc   1925120 Mar 13 14:25 result.tar.gz
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc      9222 Mar 13 14:25 runtime_log.err
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc       665 Mar 13 14:25 LVYLDmjxfK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm43kLDmOkIpjm.diag
[2026-03-13 14:25:17] -rw-r--r--. 1 boinc boinc     20788 Mar 13 14:25 stderr.txt
[2026-03-13 14:25:17] HITS file was successfully produced:
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc 276078043 Mar 13 14:23 shared/HITS.pool.root.1
[2026-03-13 14:25:17]  *** Contents of shared directory: ***
[2026-03-13 14:25:17] total 501288
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc     15845 Mar 13 11:19 start_atlas.sh
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc    597545 Mar 13 11:19 input.tar.gz
[2026-03-13 14:25:17] -rw-r--r--. 2 boinc boinc 234691222 Mar 13 11:19 ATLAS.root_0
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc 276078043 Mar 13 14:23 HITS.pool.root.1
[2026-03-13 14:25:17] -rw-------. 1 boinc boinc   1925120 Mar 13 14:25 result.tar.gz
14:25:19 (12833): run_atlas exited; CPU time 43446.226690
14:25:19 (12833): called boinc_finish(0)

</stderr_txt>
]]>

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