Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:54 (867467): wrapper (7.7.26015): starting
04:53:54 (867467): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 04:53:54] Arguments: --nthreads 4
[2026-03-14 04:53:54] Threads: 4
[2026-03-14 04:53:54] Checking for CVMFS
[2026-03-14 04:53:54] No cvmfs_config command found, will try listing directly
[2026-03-14 04:53:54] CVMFS is ok
[2026-03-14 04:53:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:53:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:53:54] Further information can be found at the LHC@home message board.
[2026-03-14 04:53:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:53:54] Checking for apptainer binary...
[2026-03-14 04:53:54] which: no apptainer in ((null))
[2026-03-14 04:53:54] apptainer is not installed, using version from CVMFS
[2026-03-14 04:53:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:53:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-14 04:53:54] apptainer works
[2026-03-14 04:53:54] Set ATHENA_PROC_NUMBER=4
[2026-03-14 04:53:54] Set ATHENA_CORE_NUMBER=4
[2026-03-14 04:53:54] Starting ATLAS job with PandaID=7050768130
[2026-03-14 04:53:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 08:48:25]  *** The last 200 lines of the pilot log: ***
[2026-03-14 08:48:25] 2026-03-14 07:46:37,916 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_849644/.job.ad'
[2026-03-14 08:48:25] 2026-03-14 07:46:37,916 | INFO     | total number of processed events: 400 (read)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,928 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7050768130/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,928 | INFO     | extracted standard info from prmon json
[2026-03-14 08:48:25] 2026-03-14 07:46:37,928 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 08:48:25] 2026-03-14 07:46:37,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:48:25] 2026-03-14 07:46:37,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:48:25] 2026-03-14 07:46:37,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:48:25] 2026-03-14 07:46:37,933 | INFO     | fitting pss+swap vs Time
[2026-03-14 08:48:25] 2026-03-14 07:46:37,933 | INFO     | sum of square deviations: 3723716330.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,935 | INFO     | sum of deviations: 19059585969.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,935 | INFO     | mean x: 1773467426.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,935 | INFO     | mean y: 2310837.8515283843
[2026-03-14 08:48:25] 2026-03-14 07:46:37,935 | INFO     | intersect: -9075060227.37893
[2026-03-14 08:48:25] 2026-03-14 07:46:37,936 | INFO     | chi2: 2.0612677028749427
[2026-03-14 08:48:25] 2026-03-14 07:46:37,936 | INFO     | sum of square deviations: 3485088600.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,937 | INFO     | sum of deviations: 32697735175.5
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | mean x: 1773467273.5
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | mean y: 2319392.4241071427
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | intersect: -16636673157.526857
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | chi2: 1.2758080817607762
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | current chi2=1.2758080817607762 (change=38.10565798991808 %)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,938 | INFO     | sum of square deviations: 3256879670.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,940 | INFO     | sum of deviations: 31842991311.000008
[2026-03-14 08:48:25] 2026-03-14 07:46:37,940 | INFO     | mean x: 1773467121.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,940 | INFO     | mean y: 2318821.1552511416
[2026-03-14 08:48:25] 2026-03-14 07:46:37,940 | INFO     | intersect: -17337129929.294655
[2026-03-14 08:48:25] 2026-03-14 07:46:37,940 | INFO     | chi2: 1.276223427550639
[2026-03-14 08:48:25] 2026-03-14 07:46:37,941 | INFO     | current chi2=1.276223427550639 (change=-0.032555507039081305 %)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,941 | INFO     | right removable region: 218
[2026-03-14 08:48:25] 2026-03-14 07:46:37,941 | INFO     | sum of square deviations: 3485088600.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | sum of deviations: -9466985707.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | mean x: 1773467578.5
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | mean y: 2328864.9553571427
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | intersect: 4819822519.919367
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | chi2: 0.8070321068281809
[2026-03-14 08:48:25] 2026-03-14 07:46:37,943 | INFO     | current chi2=0.8070321068281809 (change=60.84777801046526 %)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,944 | INFO     | sum of square deviations: 3256879670.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,945 | INFO     | sum of deviations: -9868333621.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,945 | INFO     | mean x: 1773467731.0
[2026-03-14 08:48:25] 2026-03-14 07:46:37,945 | INFO     | mean y: 2329122.3242009133
[2026-03-14 08:48:25] 2026-03-14 07:46:37,945 | INFO     | intersect: 5375929933.184334
[2026-03-14 08:48:25] 2026-03-14 07:46:37,946 | INFO     | chi2: 0.8048303023898843
[2026-03-14 08:48:25] 2026-03-14 07:46:37,946 | INFO     | current chi2=0.8048303023898843 (change=0.27282736580955136 %)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,946 | INFO     | left removable region: 20
[2026-03-14 08:48:25] 2026-03-14 07:46:37,946 | INFO     | sum of square deviations: 2406926989.5
[2026-03-14 08:48:25] 2026-03-14 07:46:37,947 | INFO     | sum of deviations: 4686518705.500001
[2026-03-14 08:48:25] 2026-03-14 07:46:37,947 | INFO     | mean x: 1773467700.5
[2026-03-14 08:48:25] 2026-03-14 07:46:37,948 | INFO     | mean y: 2337435.1363636362
[2026-03-14 08:48:25] 2026-03-14 07:46:37,948 | INFO     | intersect: -3450775014.161436
[2026-03-14 08:48:25] 2026-03-14 07:46:37,948 | INFO     | chi2: 0.0016682871085140281
[2026-03-14 08:48:25] 2026-03-14 07:46:37,948 | INFO     | current memory leak: 1.95 B/s (using 198 data points, chi2=0.00)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | could have reported an average CPU frequency of 2651 MHz (11 samples)
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | ..............................
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . Timing measurements:
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . get job = 0 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . initial setup = 5 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . payload setup = 5 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . stage-in = 0 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . payload execution = 13919 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . stage-out = 1 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,949 | INFO     | . log creation = 0 s
[2026-03-14 08:48:25] 2026-03-14 07:46:37,950 | INFO     | ..............................
[2026-03-14 08:48:25] 2026-03-14 07:46:38,230 | INFO     | 
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | job summary report
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | --------------------------------------------------
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | PanDA job id: 7050768130
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | task id: 48967094
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | errors: (none)
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | pilot state: finished 
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | transexitcode: 0
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | exeerrorcode: 0
[2026-03-14 08:48:25] 2026-03-14 07:46:38,231 | INFO     | exeerrordiag: 
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | exitcode: 0
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | exitmsg: OK
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | cpuconsumptiontime: 53695 s
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | nevents: 400
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | neventsw: 0
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | pid: 879056
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | pgrp: 879056
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | corecount: 4
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | event service: False
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | sizes: {0: 2279746, 1: 2280263, 12: 2280263, 13929: 2310683, 13931: 2319703, 13933: 2319759, 13936: 2320081}
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | --------------------------------------------------
[2026-03-14 08:48:25] 2026-03-14 07:46:38,232 | INFO     | 
[2026-03-14 08:48:25] 2026-03-14 07:46:38,233 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-03-14 08:48:25] 2026-03-14 07:46:38,254 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,254 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | job 7050768130 has completed (purged errors)
[2026-03-14 08:48:25] 2026-03-14 07:46:38,256 | INFO     | overall cleanup function is called
[2026-03-14 08:48:25] 2026-03-14 07:46:39,265 | INFO     | --- collectZombieJob: --- 10, [879056]
[2026-03-14 08:48:25] 2026-03-14 07:46:39,265 | INFO     | zombie collector waiting for pid 879056
[2026-03-14 08:48:25] 2026-03-14 07:46:39,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 08:48:25] 2026-03-14 07:46:39,265 | INFO     | collected zombie processes
[2026-03-14 08:48:25] 2026-03-14 07:46:39,265 | INFO     | will attempt to kill all subprocesses of pid=879056
[2026-03-14 08:48:25] 2026-03-14 07:46:39,683 | INFO     | process IDs to be killed: [879056] (in reverse order)
[2026-03-14 08:48:25] 2026-03-14 07:46:39,807 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 08:48:25] 2026-03-14 07:46:39,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 08:48:25] 2026-03-14 07:46:39,820 | INFO     | did not find any defunct processes belonging to 879056
[2026-03-14 08:48:25] 2026-03-14 07:46:39,832 | INFO     | did not find any defunct processes belonging to 879056
[2026-03-14 08:48:25] 2026-03-14 07:46:39,832 | INFO     | ready for new job
[2026-03-14 08:48:25] 2026-03-14 07:46:39,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 08:48:25] 2026-03-14 07:46:39,835 | INFO     | **************************************
[2026-03-14 08:48:25] 2026-03-14 07:46:39,835 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 08:48:25] 2026-03-14 07:46:39,835 | INFO     | **************************************
[2026-03-14 08:48:25] 2026-03-14 07:46:39,835 | INFO     | 
[2026-03-14 08:48:25] 2026-03-14 07:46:39,839 | INFO     | architecture information:
[2026-03-14 08:48:25] 2026-03-14 07:46:39,839 | INFO     | executing command: cat /etc/os-release
[2026-03-14 08:48:25] 2026-03-14 07:46:39,854 | INFO     | cat /etc/os-release:
[2026-03-14 08:48:25] NAME="CentOS Linux"
[2026-03-14 08:48:25] VERSION="7 (Core)"
[2026-03-14 08:48:25] ID="centos"
[2026-03-14 08:48:25] ID_LIKE="rhel fedora"
[2026-03-14 08:48:25] VERSION_ID="7"
[2026-03-14 08:48:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 08:48:25] ANSI_COLOR="0;31"
[2026-03-14 08:48:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 08:48:25] HOME_URL="https://www.centos.org/"
[2026-03-14 08:48:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 08:48:25] 
[2026-03-14 08:48:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 08:48:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 08:48:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 08:48:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 08:48:25] 
[2026-03-14 08:48:25] 2026-03-14 07:46:39,854 | INFO     | **************************************
[2026-03-14 08:48:25] 2026-03-14 07:46:40,357 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-03-14 08:48:25] 2026-03-14 07:46:40,374 | INFO     | sufficient remaining disk space (20678967296 B)
[2026-03-14 08:48:25] 2026-03-14 07:46:40,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 08:48:25] 2026-03-14 07:46:40,374 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 08:48:25] 2026-03-14 07:46:40,375 | INFO     | update_server=False
[2026-03-14 08:48:25] 2026-03-14 07:46:40,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 08:48:25] 2026-03-14 07:46:40,384 | INFO     | all payload control threads have been joined
[2026-03-14 08:48:25] 2026-03-14 07:46:40,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 08:48:25] 2026-03-14 07:46:41,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:48:25] 2026-03-14 07:46:41,091 | INFO     | aborting loop
[2026-03-14 08:48:25] 2026-03-14 07:46:41,380 | INFO     | [job] retrieve thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:41,389 | INFO     | [payload] control thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:41,427 | INFO     | all data control threads have been joined
[2026-03-14 08:48:25] 2026-03-14 07:46:41,552 | INFO     | [data] copytool_in thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:41,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 08:48:25] 2026-03-14 07:46:41,671 | INFO     | [payload] validate_post thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:41,781 | INFO     | [payload] failed_post thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:41,841 | INFO     | all job control threads have been joined
[2026-03-14 08:48:25] 2026-03-14 07:46:41,973 | INFO     | [job] validate thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,096 | INFO     | [job] job monitor thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,177 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,390 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,432 | INFO     | [data] control thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,569 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,847 | INFO     | [job] control thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:42,988 | INFO     | [data] copytool_out thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:43,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:48:25] 2026-03-14 07:46:44,054 | INFO     | [job] queue monitor thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:45,580 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:46:51,298 | INFO     | job.realtimelogging is not enabled
[2026-03-14 08:48:25] 2026-03-14 07:46:52,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 08:48:25] 2026-03-14 07:47:09,343 | INFO     | 13954s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-14 08:48:25] 2026-03-14 07:47:10,822 | INFO     | PID=871669 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 08:48:25] 2026-03-14 07:47:10,822 | INFO     | .. there are 12 such processes running
[2026-03-14 08:48:25] 2026-03-14 07:47:10,822 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 08:48:25] 2026-03-14 07:47:10,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 08:48:25] 2026-03-14 07:47:10,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 08:48:25] 2026-03-14 07:47:32,994 | INFO     | [monitor] cgroup control has ended
[2026-03-14 08:48:25] 2026-03-14 07:47:34,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22789879551808)>', '<ExcThread(monitor, started 22789566232320)>']
[2026-03-14 08:48:25] 2026-03-14 07:47:34,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 08:48:25] 2026-03-14 07:47:34,928 | INFO     | [monitor] control thread has ended
[2026-03-14 08:48:25] 2026-03-14 07:47:39,327 | INFO     | all workflow threads have been joined
[2026-03-14 08:48:25] 2026-03-14 07:47:39,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 08:48:25] 2026-03-14 07:47:39,328 | INFO     | traces error code: 0
[2026-03-14 08:48:25] 2026-03-14 07:47:39,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 08:48:25] 2026-03-14 07:47:39,464 [wrapper] ==== pilot stdout END ====
[2026-03-14 08:48:25] 2026-03-14 07:47:39,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 08:48:25] 2026-03-14 07:47:39,470 [wrapper] pilotpid: 871669
[2026-03-14 08:48:25] 2026-03-14 07:47:39,473 [wrapper] Pilot exit status: 0
[2026-03-14 08:48:25] 2026-03-14 07:47:39,483 [wrapper] pandaids: 7050768130
[2026-03-14 08:48:25] 2026-03-14 07:47:39,561 [wrapper] cleanup supervisor_pilot 1178428 871670
[2026-03-14 08:48:25] 2026-03-14 07:47:39,565 [wrapper] Test setup, not cleaning
[2026-03-14 08:48:25] 2026-03-14 07:47:39,568 [wrapper] apfmon messages muted
[2026-03-14 08:48:25] 2026-03-14 07:47:39,571 [wrapper] ==== wrapper stdout END ====
[2026-03-14 08:48:25] 2026-03-14 07:47:39,573 [wrapper] ==== wrapper stderr END ====
[2026-03-14 08:48:25]  *** Error codes and diagnostics ***
[2026-03-14 08:48:25]     "exeErrorCode": 0,
[2026-03-14 08:48:25]     "exeErrorDiag": "",
[2026-03-14 08:48:25]     "pilotErrorCode": 0,
[2026-03-14 08:48:25]     "pilotErrorDiag": "",
[2026-03-14 08:48:25]  *** Listing of results directory ***
[2026-03-14 08:48:25] total 430400
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc    585013 Mar 12 02:25 pilot3.tar.gz
[2026-03-14 08:48:25] -rwx------. 1 boinc boinc     36322 Mar 12 02:27 runpilot2-wrapper.sh
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc      5111 Mar 12 02:29 queuedata.json
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc       100 Mar 14 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 08:48:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 04:53 run_atlas
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc       105 Mar 14 04:53 job.xml
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc      6563 Mar 14 04:53 init_data.xml
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc 220374604 Mar 14 04:53 EVNT.48967092._000274.pool.root.1
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:53 start_atlas.sh
[2026-03-14 08:48:25] drwxrwx--x. 2 boinc boinc      4096 Mar 14 04:53 shared
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc    597531 Mar 14 04:53 input.tar.gz
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc         0 Mar 14 04:53 boinc_lockfile
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc      2597 Mar 14 04:53 pandaJob.out
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc   1004579 Mar 14 04:54 agis_schedconf.cvmfs.json
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc       451 Mar 14 04:54 workernode_map.json
[2026-03-14 08:48:25] drwx------. 5 boinc boinc      4096 Mar 14 04:54 pilot3
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc 211684909 Mar 14 08:45 HITS.48967094._006523.pool.root.1
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc       531 Mar 14 08:46 boinc_task_state.xml
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc        95 Mar 14 08:46 pilot_heartbeat.json
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc      1044 Mar 14 08:46 memory_monitor_summary.json
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc   1511579 Mar 14 08:46 agis_ddmendpoints.agis.ALL.json
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc    403438 Mar 14 08:46 log.48967094._006523.job.log.tgz.1
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc      6393 Mar 14 08:46 heartbeat.json
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc      5016 Mar 14 08:47 pilotlog.txt
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc   1960425 Mar 14 08:47 log.48967094._006523.job.log.1
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc       357 Mar 14 08:47 output.list
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc       620 Mar 14 08:47 runtime_log
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc   2385920 Mar 14 08:47 result.tar.gz
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc      9205 Mar 14 08:47 runtime_log.err
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc       665 Mar 14 08:47 OMCNDmi0jK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMtiLDmk67F3m.diag
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc        28 Mar 14 08:48 wrapper_checkpoint.txt
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc      8192 Mar 14 08:48 boinc_mmap_file
[2026-03-14 08:48:25] -rw-r--r--. 1 boinc boinc     20898 Mar 14 08:48 stderr.txt
[2026-03-14 08:48:25] HITS file was successfully produced:
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc 211684909 Mar 14 08:45 shared/HITS.pool.root.1
[2026-03-14 08:48:25]  *** Contents of shared directory: ***
[2026-03-14 08:48:25] total 424876
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc 220374604 Mar 14 04:53 ATLAS.root_0
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc     15845 Mar 14 04:53 start_atlas.sh
[2026-03-14 08:48:25] -rw-r--r--. 2 boinc boinc    597531 Mar 14 04:53 input.tar.gz
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc 211684909 Mar 14 08:45 HITS.pool.root.1
[2026-03-14 08:48:25] -rw-------. 1 boinc boinc   2385920 Mar 14 08:47 result.tar.gz
08:48:27 (867467): run_atlas exited; CPU time 54276.267265
08:48:27 (867467): called boinc_finish(0)

</stderr_txt>
]]>

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