Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:00 (2045850): wrapper (7.7.26015): starting
18:00:00 (2045850): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 18:00:00] Arguments: --nthreads 12
[2026-03-11 18:00:00] Threads: 12
[2026-03-11 18:00:00] Checking for CVMFS
[2026-03-11 18:00:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 18:00:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 18:00:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 18:00:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 18:00:00] 2.11.5.0 1774115 145168 154228 157177 1 712 45554091 45568000 27262 130560 0 1297244541 99.821 704719389 17639 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-11 18:00:00] CVMFS is ok
[2026-03-11 18:00:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 18:00:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 18:00:00] Further information can be found at the LHC@home message board.
[2026-03-11 18:00:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 18:00:00] Checking for apptainer binary...
[2026-03-11 18:00:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 18:00:00] Running /usr/bin/apptainer --version
[2026-03-11 18:00:00] apptainer version 1.4.1-1.el9
[2026-03-11 18:00:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 18:00:01] wns0089.triumf.lcg
[2026-03-11 18:00:01] apptainer works
[2026-03-11 18:00:01] Set ATHENA_PROC_NUMBER=12
[2026-03-11 18:00:01] Set ATHENA_CORE_NUMBER=12
[2026-03-11 18:00:01] Starting ATLAS job with PandaID=7036754424
[2026-03-11 18:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 18:03:45]  *** The last 200 lines of the pilot log: ***
[2026-03-11 18:03:45] 2026-03-12 01:03:11,882 | WARNING  | found no stored workdir sizes
[2026-03-11 18:03:45] 2026-03-12 01:03:11,883 | INFO     | will not add max space = 0 B to job metrics
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | WARNING  | wrong length of table data, x=[1773277254.0], y=[1044.0] (must be same and length>=4)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . Timing measurements:
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . get job = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . initial setup = 12 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload setup = 8 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . stage-in = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload execution = 25 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . stage-out = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . log creation = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:03:45] 2026-03-12 01:03:11,893 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036754424/pilotlog.txt
[2026-03-11 18:03:45] 2026-03-12 01:03:12,004 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-11 18:03:45] - Log from pilotlog.txt -
[2026-03-11 18:03:45] 2026-03-12 01:03:11,878 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 18:03:45] 2026-03-12 01:03:11,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 18:03:45] 2026-03-12 01:03:11,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 18:03:45] 2026-03-12 01:03:11,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:03:45] 2026-03-12 01:03:11,882 | WARNING  | found no stored workdir sizes
[2026-03-11 18:03:45] 2026-03-12 01:03:11,883 | INFO     | will not add max space = 0 B to job metrics
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | WARNING  | wrong length of table data, x=[1773277254.0], y=[1044.0] (must be same and length>=4)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . Timing measurements:
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . get job = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . initial setup = 12 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload setup = 8 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . stage-in = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload execution = 25 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . stage-out = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . log creation = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:03:45] 2026-03-12 01:03:11,893 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036754424/pilotlog.txt
[2026-03-11 18:03:45] 2026-03-12 01:03:12,005 | WARNING  | 
[2026-03-11 18:03:45] [begin log extracts]
[2026-03-11 18:03:45] - Log from pilotlog.txt -
[2026-03-11 18:03:45] 2026-03-12 01:03:11,878 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 18:03:45] 2026-03-12 01:03:11,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 18:03:45] 2026-03-12 01:03:11,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 18:03:45] 2026-03-12 01:03:11,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:03:45] 2026-03-12 01:03:11,882 | WARNING  | found no stored workdir sizes
[2026-03-11 18:03:45] 2026-03-12 01:03:11,883 | INFO     | will not add max space = 0 B to job metrics
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | WARNING  | wrong length of table data, x=[1773277254.0], y=[1044.0] (must be same and length>=4)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,886 | INFO     | could have reported an average CPU frequency of 2800 MHz (4 samples)
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . Timing measurements:
[2026-03-11 18:03:45] 2026-03-12 01:03:11,888 | INFO     | . get job = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . initial setup = 12 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload setup = 8 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . stage-in = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,889 | INFO     | . payload execution = 25 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . stage-out = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,890 | INFO     | . log creation = 0 s
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | ..............................
[2026-03-11 18:03:45] 2026-03-12 01:03:11,891 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:03:45] 2026-03-12 01:03:11,893 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036754424/pilotlog.txt
[2026-03-11 18:03:45] [end log extracts]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,005 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-11 18:03:45] 2026-03-12 01:03:12,005 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | 
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | job summary report
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | --------------------------------------------------
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | PanDA job id: 7036754424
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | task id: 48838577
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-11 18:01:06,474 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | pilot state: failed 
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | transexitcode: 65
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | exeerrorcode: 65
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | exitcode: 65
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | cpuconsumptiontime: 14 s
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | nevents: 0
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | neventsw: 0
[2026-03-11 18:03:45] 2026-03-12 01:03:12,403 | INFO     | pid: 2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | pgrp: 2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | corecount: 12
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | event service: False
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | sizes: {0: 2279804, 1: 2280265, 11: 2280265, 38: 2307910, 41: 2307910, 156: 2308076}
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | --------------------------------------------------
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | 
[2026-03-11 18:03:45] 2026-03-12 01:03:12,404 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-11 18:03:45] 2026-03-12 01:03:12,460 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 18:03:45] 2026-03-12 01:03:12,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 18:03:45] 2026-03-12 01:03:12,462 | INFO     | job 7036754424 has completed (purged errors)
[2026-03-11 18:03:45] 2026-03-12 01:03:12,462 | INFO     | overall cleanup function is called
[2026-03-11 18:03:45] 2026-03-12 01:03:13,469 | INFO     | --- collectZombieJob: --- 10, [2057729]
[2026-03-11 18:03:45] 2026-03-12 01:03:13,469 | INFO     | zombie collector waiting for pid 2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:13,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 18:03:45] 2026-03-12 01:03:13,470 | INFO     | collected zombie processes
[2026-03-11 18:03:45] 2026-03-12 01:03:13,470 | INFO     | will attempt to kill all subprocesses of pid=2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:14,356 | INFO     | process IDs to be killed: [2057729] (in reverse order)
[2026-03-11 18:03:45] 2026-03-12 01:03:14,521 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 18:03:45] 2026-03-12 01:03:14,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 18:03:45] 2026-03-12 01:03:14,541 | INFO     | did not find any defunct processes belonging to 2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:14,551 | INFO     | did not find any defunct processes belonging to 2057729
[2026-03-11 18:03:45] 2026-03-12 01:03:14,552 | INFO     | ready for new job
[2026-03-11 18:03:45] 2026-03-12 01:03:14,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 18:03:45] 2026-03-12 01:03:14,554 | INFO     | **************************************
[2026-03-11 18:03:45] 2026-03-12 01:03:14,554 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 18:03:45] 2026-03-12 01:03:14,554 | INFO     | **************************************
[2026-03-11 18:03:45] 2026-03-12 01:03:14,554 | INFO     | 
[2026-03-11 18:03:45] 2026-03-12 01:03:14,559 | INFO     | architecture information:
[2026-03-11 18:03:45] 2026-03-12 01:03:14,560 | INFO     | executing command: cat /etc/os-release
[2026-03-11 18:03:45] 2026-03-12 01:03:14,624 | INFO     | cat /etc/os-release:
[2026-03-11 18:03:45] NAME="CentOS Linux"
[2026-03-11 18:03:45] VERSION="7 (Core)"
[2026-03-11 18:03:45] ID="centos"
[2026-03-11 18:03:45] ID_LIKE="rhel fedora"
[2026-03-11 18:03:45] VERSION_ID="7"
[2026-03-11 18:03:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 18:03:45] ANSI_COLOR="0;31"
[2026-03-11 18:03:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 18:03:45] HOME_URL="https://www.centos.org/"
[2026-03-11 18:03:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 18:03:45] 
[2026-03-11 18:03:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 18:03:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 18:03:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 18:03:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 18:03:45] 
[2026-03-11 18:03:45] 2026-03-12 01:03:14,625 | INFO     | **************************************
[2026-03-11 18:03:45] 2026-03-12 01:03:15,128 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-11 18:03:45] 2026-03-12 01:03:15,152 | INFO     | sufficient remaining disk space (1486383742976 B)
[2026-03-11 18:03:45] 2026-03-12 01:03:15,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 18:03:45] 2026-03-12 01:03:15,152 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 18:03:45] 2026-03-12 01:03:15,152 | INFO     | update_server=False
[2026-03-11 18:03:45] 2026-03-12 01:03:15,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 18:03:45] 2026-03-12 01:03:15,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:03:45] 2026-03-12 01:03:15,153 | INFO     | aborting loop
[2026-03-11 18:03:45] 2026-03-12 01:03:15,170 | INFO     | all payload control threads have been joined
[2026-03-11 18:03:45] 2026-03-12 01:03:15,234 | INFO     | all job control threads have been joined
[2026-03-11 18:03:45] 2026-03-12 01:03:15,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 18:03:45] 2026-03-12 01:03:15,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 18:03:45] 2026-03-12 01:03:15,881 | INFO     | all data control threads have been joined
[2026-03-11 18:03:45] 2026-03-12 01:03:16,158 | INFO     | [job] retrieve thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,159 | INFO     | [job] job monitor thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,189 | INFO     | [payload] control thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,251 | INFO     | [job] control thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,410 | INFO     | [job] validate thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,504 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,703 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,886 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:16,909 | INFO     | [data] control thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:17,160 | INFO     | [data] copytool_in thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:17,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:17,306 | INFO     | [payload] failed_post thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:17,411 | INFO     | [data] copytool_out thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:17,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:03:45] 2026-03-12 01:03:17,617 | INFO     | [payload] validate_post thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:18,423 | INFO     | [job] queue monitor thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:19,450 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 18:03:45] 2026-03-12 01:03:24,755 | INFO     | [monitor] cgroup control has ended
[2026-03-11 18:03:45] 2026-03-12 01:03:26,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301531866944)>', '<ExcThread(monitor, started 140300995516160)>']
[2026-03-11 18:03:45] 2026-03-12 01:03:31,277 | INFO     | all workflow threads have been joined
[2026-03-11 18:03:45] 2026-03-12 01:03:31,277 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 18:03:45] 2026-03-12 01:03:31,278 | INFO     | traces error code: 0
[2026-03-11 18:03:45] 2026-03-12 01:03:31,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | INFO     | PID=2050991 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | INFO     | .. there are 49 such processes running
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 18:03:45] 2026-03-12 01:03:45,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 18:03:45] 2026-03-12 01:03:45,066 | CRITICAL | thread 'MainThread' is not alive
[2026-03-11 18:03:45] 2026-03-12 01:03:45,066 | INFO     | [monitor] control thread has ended
[2026-03-11 18:03:45] 2026-03-12 01:03:45,377 [wrapper] ==== pilot stdout END ====
[2026-03-11 18:03:45] 2026-03-12 01:03:45,379 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 18:03:45] 2026-03-12 01:03:45,381 [wrapper] pilotpid: 2050991
[2026-03-11 18:03:45] 2026-03-12 01:03:45,383 [wrapper] Pilot exit status: 0
[2026-03-11 18:03:45] 2026-03-12 01:03:45,436 [wrapper] pandaids: 7036754424
[2026-03-11 18:03:45] 2026-03-12 01:03:45,495 [wrapper] cleanup supervisor_pilot 2050997 2050992
[2026-03-11 18:03:45] 2026-03-12 01:03:45,498 [wrapper] Test setup, not cleaning
[2026-03-11 18:03:45] 2026-03-12 01:03:45,501 [wrapper] apfmon messages muted
[2026-03-11 18:03:45] 2026-03-12 01:03:45,511 [wrapper] ==== wrapper stdout END ====
[2026-03-11 18:03:45] 2026-03-12 01:03:45,532 [wrapper] ==== wrapper stderr END ====
[2026-03-11 18:03:45]  *** Error codes and diagnostics ***
[2026-03-11 18:03:45]     "exeErrorCode": 65,
[2026-03-11 18:03:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-11 18:03:45]     "pilotErrorCode": 1305,
[2026-03-11 18:03:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-11 18:03:45]  *** Listing of results directory ***
[2026-03-11 18:03:45] total 288956
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:22 pilot3.tar.gz
[2026-03-11 18:03:45] -rwx------. 1 boinc boinc     36322 Mar  3 14:24 runpilot2-wrapper.sh
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:26 queuedata.json
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc       100 Mar 11 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 18:03:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 17:59 run_atlas
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc       105 Mar 11 17:59 job.xml
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc      6594 Mar 11 18:00 init_data.xml
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc 291753757 Mar 11 18:00 EVNT.48220197._000228.pool.root.1
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc     15845 Mar 11 18:00 start_atlas.sh
[2026-03-11 18:03:45] drwxrwx--x. 2 boinc boinc      4096 Mar 11 18:00 shared
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc    597974 Mar 11 18:00 input.tar.gz
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc         0 Mar 11 18:00 boinc_lockfile
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc      2567 Mar 11 18:00 pandaJob.out
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc   1006227 Mar 11 18:00 agis_schedconf.cvmfs.json
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc   1511578 Mar 11 18:00 agis_ddmendpoints.agis.ALL.json
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc       445 Mar 11 18:00 workernode_map.json
[2026-03-11 18:03:45] drwx------. 5 boinc boinc      4096 Mar 11 18:00 pilot3
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc       521 Mar 11 18:01 boinc_task_state.xml
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc       988 Mar 11 18:01 memory_monitor_summary.json
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc     21278 Mar 11 18:01 log.48838577._005760.job.log.tgz.1
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc      7045 Mar 11 18:03 heartbeat.json
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc      8192 Mar 11 18:03 boinc_mmap_file
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc        22 Mar 11 18:03 wrapper_checkpoint.txt
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc       893 Mar 11 18:03 pilotlog.txt
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc        95 Mar 11 18:03 pilot_heartbeat.json
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc     82164 Mar 11 18:03 log.48838577._005760.job.log.1
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc       188 Mar 11 18:03 output.list
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc       620 Mar 11 18:03 runtime_log
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc    122880 Mar 11 18:03 result.tar.gz
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc      8635 Mar 11 18:03 runtime_log.err
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc       646 Mar 11 18:03 qF3KDmGLnH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmo8FLDmQPWi9m.diag
[2026-03-11 18:03:45] -rw-r--r--. 1 boinc boinc     21556 Mar 11 18:03 stderr.txt
[2026-03-11 18:03:45] No HITS result produced
[2026-03-11 18:03:45]  *** Contents of shared directory: ***
[2026-03-11 18:03:45] total 285640
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc 291753757 Mar 11 18:00 ATLAS.root_0
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc     15845 Mar 11 18:00 start_atlas.sh
[2026-03-11 18:03:45] -rw-r--r--. 2 boinc boinc    597974 Mar 11 18:00 input.tar.gz
[2026-03-11 18:03:45] -rw-------. 1 boinc boinc    122880 Mar 11 18:03 result.tar.gz
18:03:47 (2045850): run_atlas exited; CPU time 19.140831
18:03:47 (2045850): called boinc_finish(0)

</stderr_txt>
]]>

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