Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:20 (73435): wrapper (7.7.26015): starting
13:52:20 (73435): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 13:52:20] Arguments: --nthreads 4
[2026-03-12 13:52:20] Threads: 4
[2026-03-12 13:52:20] Checking for CVMFS
[2026-03-12 13:52:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 13:52:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 13:52:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 13:52:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 13:52:21] 2.9.2.0 3054 440 67436 157201 0 50 30519092 36864000 0 130560 0 194949 99.984 20422 8162 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 13:52:21] CVMFS is ok
[2026-03-12 13:52:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 13:52:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 13:52:21] Further information can be found at the LHC@home message board.
[2026-03-12 13:52:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 13:52:21] Checking for apptainer binary...
[2026-03-12 13:52:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 13:52:21] Running /usr/bin/apptainer --version
[2026-03-12 13:52:21] apptainer version 1.4.1-1.1
[2026-03-12 13:52:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 13:52:21] thA375a
[2026-03-12 13:52:21] apptainer works
[2026-03-12 13:52:21] Set ATHENA_PROC_NUMBER=4
[2026-03-12 13:52:21] Set ATHENA_CORE_NUMBER=4
[2026-03-12 13:52:21] Starting ATLAS job with PandaID=7036753860
[2026-03-12 13:52:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 15:19:48]  *** The last 200 lines of the pilot log: ***
[2026-03-12 15:19:48] 2026-03-12 14:19:19,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 15:19:48] 2026-03-12 14:19:19,923 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:19,943 | INFO     | [job] control thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,154 | INFO     | [data] control thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,222 | INFO     | [job] validate thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,325 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,368 | INFO     | [data] copytool_out thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,398 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,562 | INFO     | [payload] validate_post thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:20,577 | INFO     | [data] copytool_in thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:23,881 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:29,142 | INFO     | job.realtimelogging is not enabled
[2026-03-12 15:19:48] 2026-03-12 14:19:30,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 15:19:48] 2026-03-12 14:19:41,300 | INFO     | [monitor] cgroup control has ended
[2026-03-12 15:19:48] 2026-03-12 14:19:43,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376334247744)>', '<ExcThread(monitor, started 140375519893248)>']
[2026-03-12 15:19:48] 2026-03-12 14:19:48,291 | INFO     | all workflow threads have been joined
[2026-03-12 15:19:48] 2026-03-12 14:19:48,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 15:19:48] 2026-03-12 14:19:48,292 | INFO     | traces error code: 0
[2026-03-12 15:19:48] 2026-03-12 14:19:48,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | INFO     | PID=77552 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 15:19:48] 2026-03-12 14:19:48,432 | INFO     | [monitor] control thread has ended
[2026-03-12 15:19:48] 2026-03-12 14:19:48,506 [wrapper] ==== pilot stdout END ====
[2026-03-12 15:19:48] 2026-03-12 14:19:48,511 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 15:19:48] 2026-03-12 14:19:48,515 [wrapper] pilotpid: 77552
[2026-03-12 15:19:48] 2026-03-12 14:19:48,519 [wrapper] Pilot exit status: 0
[2026-03-12 15:19:48] 2026-03-12 14:19:48,532 [wrapper] pandaids: 7036753860
[2026-03-12 15:19:48] 2026-03-12 14:19:48,554 [wrapper] cleanup supervisor_pilot   87353 77553
[2026-03-12 15:19:48] 2026-03-12 14:19:48,558 [wrapper] Test setup, not cleaning
[2026-03-12 15:19:48] 2026-03-12 14:19:48,563 [wrapper] apfmon messages muted
[2026-03-12 15:19:48] 2026-03-12 14:19:48,566 [wrapper] ==== wrapper stdout END ====
[2026-03-12 15:19:48] 2026-03-12 14:19:48,570 [wrapper] ==== wrapper stderr END ====
[2026-03-12 15:19:48]  *** Error codes and diagnostics ***
[2026-03-12 15:19:48]     "exeErrorCode": 0,
[2026-03-12 15:19:48]     "exeErrorDiag": "",
[2026-03-12 15:19:48]     "pilotErrorCode": 0,
[2026-03-12 15:19:48]     "pilotErrorDiag": "",
[2026-03-12 15:19:48]  *** Listing of results directory ***
[2026-03-12 15:19:48] total 518120
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc    584627 Mar  3 22:23 pilot3.tar.gz
[2026-03-12 15:19:48] -rwx------ 1 boinc boinc     36322 Mar  3 23:07 runpilot2-wrapper.sh
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      5111 Mar  3 23:08 queuedata.json
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc       100 Mar 12 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 15:19:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 13:52 run_atlas
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc       105 Mar 12 13:52 job.xml
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc 290213910 Mar 12 13:52 EVNT.48220197._000214.pool.root.1
[2026-03-12 15:19:48] drwxrwx--x 2 boinc boinc      4096 Mar 12 13:52 shared
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc    597970 Mar 12 13:52 input.tar.gz
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc     15845 Mar 12 13:52 start_atlas.sh
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc         0 Mar 12 13:52 boinc_setup_complete
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      6377 Mar 12 13:52 init_data.xml
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc         0 Mar 12 13:52 boinc_lockfile
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      2567 Mar 12 13:52 pandaJob.out
[2026-03-12 15:19:48] -rw------- 1 boinc boinc   1006233 Mar 12 13:52 agis_schedconf.cvmfs.json
[2026-03-12 15:19:48] -rw------- 1 boinc boinc   1511578 Mar 12 13:52 agis_ddmendpoints.agis.ALL.json
[2026-03-12 15:19:48] -rw------- 1 boinc boinc       428 Mar 12 13:52 workernode_map.json
[2026-03-12 15:19:48] drwx------ 5 boinc boinc      4096 Mar 12 13:52 pilot3
[2026-03-12 15:19:48] -rw------- 1 boinc boinc 234349348 Mar 12 15:18 HITS.48838577._005435.pool.root.1
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc       529 Mar 12 15:18 boinc_task_state.xml
[2026-03-12 15:19:48] -rw------- 1 boinc boinc        95 Mar 12 15:18 pilot_heartbeat.json
[2026-03-12 15:19:48] -rw------- 1 boinc boinc      1019 Mar 12 15:19 memory_monitor_summary.json
[2026-03-12 15:19:48] -rw------- 1 boinc boinc    274524 Mar 12 15:19 log.48838577._005435.job.log.tgz.1
[2026-03-12 15:19:48] -rw------- 1 boinc boinc      6314 Mar 12 15:19 heartbeat.json
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      8192 Mar 12 15:19 boinc_mmap_file
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc        27 Mar 12 15:19 wrapper_checkpoint.txt
[2026-03-12 15:19:48] -rw------- 1 boinc boinc       745 Mar 12 15:19 pilotlog.txt
[2026-03-12 15:19:48] -rw------- 1 boinc boinc    758140 Mar 12 15:19 log.48838577._005435.job.log.1
[2026-03-12 15:19:48] -rw------- 1 boinc boinc       357 Mar 12 15:19 output.list
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc       620 Mar 12 15:19 runtime_log
[2026-03-12 15:19:48] -rw------- 1 boinc boinc   1054720 Mar 12 15:19 result.tar.gz
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      8901 Mar 12 15:19 runtime_log.err
[2026-03-12 15:19:48] -rw------- 1 boinc boinc       658 Mar 12 15:19 OJMODmn4mH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDms1HLDmLEUgGm.diag
[2026-03-12 15:19:48] -rw-r--r-- 1 boinc boinc      6025 Mar 12 15:19 stderr.txt
[2026-03-12 15:19:48] HITS file was successfully produced:
[2026-03-12 15:19:48] -rw------- 1 boinc boinc 234349348 Mar 12 15:18 shared/HITS.pool.root.1
[2026-03-12 15:19:48]  *** Contents of shared directory: ***
[2026-03-12 15:19:48] total 513912
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc 290213910 Mar 12 13:52 ATLAS.root_0
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc    597970 Mar 12 13:52 input.tar.gz
[2026-03-12 15:19:48] -rw-r--r-- 2 boinc boinc     15845 Mar 12 13:52 start_atlas.sh
[2026-03-12 15:19:48] -rw------- 1 boinc boinc 234349348 Mar 12 15:18 HITS.pool.root.1
[2026-03-12 15:19:48] -rw------- 1 boinc boinc   1054720 Mar 12 15:19 result.tar.gz
15:19:50 (73435): run_atlas exited; CPU time 19740.126919
15:19:50 (73435): called boinc_finish(0)

</stderr_txt>
]]>

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