Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:52 (3415666): wrapper (7.7.26015): starting
00:19:52 (3415666): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:19:52] Arguments: --nthreads 8
[2026-03-12 00:19:52] Threads: 8
[2026-03-12 00:19:52] Checking for CVMFS
[2026-03-12 00:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:19:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:19:54] 2.13.3.0 6529 109868 264212 157183 3 18 29534430 40960000 12309 16776704 0 73312669 99.682 69094638 33807 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 00:19:54] CVMFS is ok
[2026-03-12 00:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:19:54] Further information can be found at the LHC@home message board.
[2026-03-12 00:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:19:54] Checking for apptainer binary...
[2026-03-12 00:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:19:54] Running /usr/bin/apptainer --version
[2026-03-12 00:19:55] apptainer version 1.4.5-2.el9
[2026-03-12 00:19:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:19:56] c-211-15.aglt2.org
[2026-03-12 00:19:56] apptainer works
[2026-03-12 00:19:56] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:19:56] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:19:56] Starting ATLAS job with PandaID=7050442254
[2026-03-12 00:19:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 19:57:54]  *** The last 200 lines of the pilot log: ***
[2026-03-12 19:57:54] 2026-03-12 16:21:42,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050442254/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,713 | INFO     | extracted standard info from prmon json
[2026-03-12 19:57:54] 2026-03-12 16:21:42,713 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 19:57:54] 2026-03-12 16:21:42,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 19:57:54] 2026-03-12 16:21:42,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 19:57:54] 2026-03-12 16:21:42,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 19:57:54] 2026-03-12 16:21:42,728 | INFO     | fitting pss+swap vs Time
[2026-03-12 19:57:54] 2026-03-12 16:21:42,729 | INFO     | sum of square deviations: 109114257361.6142
[2026-03-12 19:57:54] 2026-03-12 16:21:42,747 | INFO     | sum of deviations: 338755820776.26624
[2026-03-12 19:57:54] 2026-03-12 16:21:42,747 | INFO     | mean x: 1773310931.535411
[2026-03-12 19:57:54] 2026-03-12 16:21:42,748 | INFO     | mean y: 2488178.4093484418
[2026-03-12 19:57:54] 2026-03-12 16:21:42,748 | INFO     | intersect: -5502928021.354233
[2026-03-12 19:57:54] 2026-03-12 16:21:42,749 | INFO     | chi2: 5.634618975933819
[2026-03-12 19:57:54] 2026-03-12 16:21:42,750 | INFO     | sum of square deviations: 106812382739.95993
[2026-03-12 19:57:54] 2026-03-12 16:21:42,768 | INFO     | sum of deviations: 423100589483.19617
[2026-03-12 19:57:54] 2026-03-12 16:21:42,768 | INFO     | mean x: 1773310779.0385165
[2026-03-12 19:57:54] 2026-03-12 16:21:42,768 | INFO     | mean y: 2493740.8815977178
[2026-03-12 19:57:54] 2026-03-12 16:21:42,768 | INFO     | intersect: -7021868198.264707
[2026-03-12 19:57:54] 2026-03-12 16:21:42,769 | INFO     | chi2: 4.25791753357941
[2026-03-12 19:57:54] 2026-03-12 16:21:42,770 | INFO     | current chi2=4.25791753357941 (change=24.432911049255992 %)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,770 | INFO     | right removable region: 700
[2026-03-12 19:57:54] 2026-03-12 16:21:42,771 | INFO     | sum of square deviations: 106812065658.71596
[2026-03-12 19:57:54] 2026-03-12 16:21:42,789 | INFO     | sum of deviations: 127168945777.75027
[2026-03-12 19:57:54] 2026-03-12 16:21:42,789 | INFO     | mean x: 1773311084.042796
[2026-03-12 19:57:54] 2026-03-12 16:21:42,789 | INFO     | mean y: 2502185.841654779
[2026-03-12 19:57:54] 2026-03-12 16:21:42,789 | INFO     | intersect: -2108777094.2938666
[2026-03-12 19:57:54] 2026-03-12 16:21:42,790 | INFO     | chi2: 2.3784225856457057
[2026-03-12 19:57:54] 2026-03-12 16:21:42,790 | INFO     | current chi2=2.3784225856457057 (change=57.789114121038985 %)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,792 | INFO     | sum of square deviations: 104542521858.3389
[2026-03-12 19:57:54] 2026-03-12 16:21:42,824 | INFO     | sum of deviations: 34201267041.448257
[2026-03-12 19:57:54] 2026-03-12 16:21:42,824 | INFO     | mean x: 1773311236.5488505
[2026-03-12 19:57:54] 2026-03-12 16:21:42,824 | INFO     | mean y: 2508421.8103448274
[2026-03-12 19:57:54] 2026-03-12 16:21:42,825 | INFO     | intersect: -577633419.7169869
[2026-03-12 19:57:54] 2026-03-12 16:21:42,826 | INFO     | chi2: 1.65983712808687
[2026-03-12 19:57:54] 2026-03-12 16:21:42,826 | INFO     | current chi2=1.65983712808687 (change=30.21269062510818 %)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,827 | INFO     | sum of square deviations: 102305520340.32703
[2026-03-12 19:57:54] 2026-03-12 16:21:42,848 | INFO     | sum of deviations: -1915580902.850937
[2026-03-12 19:57:54] 2026-03-12 16:21:42,849 | INFO     | mean x: 1773311389.049204
[2026-03-12 19:57:54] 2026-03-12 16:21:42,849 | INFO     | mean y: 2510881.907380608
[2026-03-12 19:57:54] 2026-03-12 16:21:42,849 | INFO     | intersect: 35714578.251142
[2026-03-12 19:57:54] 2026-03-12 16:21:42,850 | INFO     | chi2: 1.5683156562110292
[2026-03-12 19:57:54] 2026-03-12 16:21:42,850 | INFO     | current chi2=1.5683156562110292 (change=5.513882677231624 %)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,850 | INFO     | left removable region: 30
[2026-03-12 19:57:54] 2026-03-12 16:21:42,852 | INFO     | sum of square deviations: 93258150724.6106
[2026-03-12 19:57:54] 2026-03-12 16:21:42,868 | INFO     | sum of deviations: 56822486802.635796
[2026-03-12 19:57:54] 2026-03-12 16:21:42,868 | INFO     | mean x: 1773311663.5656717
[2026-03-12 19:57:54] 2026-03-12 16:21:42,868 | INFO     | mean y: 2518558.0537313432
[2026-03-12 19:57:54] 2026-03-12 16:21:42,868 | INFO     | intersect: -1077965858.77193
[2026-03-12 19:57:54] 2026-03-12 16:21:42,869 | INFO     | chi2: 0.14426192376607422
[2026-03-12 19:57:54] 2026-03-12 16:21:42,870 | INFO     | current memory leak: 0.61 B/s (using 670 data points, chi2=0.14)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,871 | INFO     | could have reported an average CPU frequency of 2634 MHz (27 samples)
[2026-03-12 19:57:54] 2026-03-12 16:21:42,871 | INFO     | ..............................
[2026-03-12 19:57:54] 2026-03-12 16:21:42,871 | INFO     | . Timing measurements:
[2026-03-12 19:57:54] 2026-03-12 16:21:42,871 | INFO     | . get job = 0 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,871 | INFO     | . initial setup = 45 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | . payload setup = 56 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | . stage-in = 0 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | . payload execution = 43089 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | . stage-out = 9 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | . log creation = 2 s
[2026-03-12 19:57:54] 2026-03-12 16:21:42,872 | INFO     | ..............................
[2026-03-12 19:57:54] 2026-03-12 16:21:43,115 | INFO     | 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,220 | INFO     | job summary report
[2026-03-12 19:57:54] 2026-03-12 16:21:43,220 | INFO     | --------------------------------------------------
[2026-03-12 19:57:54] 2026-03-12 16:21:43,220 | INFO     | PanDA job id: 7050442254
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | task id: 48967094
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | errors: (none)
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | pilot state: finished 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | transexitcode: 0
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | exeerrorcode: 0
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | exeerrordiag: 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | exitcode: 0
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | exitmsg: OK
[2026-03-12 19:57:54] 2026-03-12 16:21:43,221 | INFO     | cpuconsumptiontime: 71370 s
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | nevents: 400
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | neventsw: 0
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | pid: 3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | pgrp: 3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | corecount: 8
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | event service: False
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | sizes: {0: 2279134, 1: 2279819, 2: 2280220, 3: 2280280, 14: 2280308, 43150: 2323347, 43161: 2332345, 43163: 2332401, 43166: 2332595}
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | --------------------------------------------------
[2026-03-12 19:57:54] 2026-03-12 16:21:43,222 | INFO     | 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,223 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 19:57:54] 2026-03-12 16:21:43,381 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,381 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,381 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | job 7050442254 has completed (purged errors)
[2026-03-12 19:57:54] 2026-03-12 16:21:43,384 | INFO     | overall cleanup function is called
[2026-03-12 19:57:54] 2026-03-12 16:21:43,645 | INFO     | PID=3421769 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 19:57:54] 2026-03-12 16:21:43,645 | INFO     | .. there are 11 such processes running
[2026-03-12 19:57:54] 2026-03-12 16:21:44,472 | INFO     | --- collectZombieJob: --- 10, [3428489]
[2026-03-12 19:57:54] 2026-03-12 16:21:44,473 | INFO     | zombie collector waiting for pid 3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:44,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 19:57:54] 2026-03-12 16:21:44,473 | INFO     | collected zombie processes
[2026-03-12 19:57:54] 2026-03-12 16:21:44,473 | INFO     | will attempt to kill all subprocesses of pid=3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:45,899 | INFO     | process IDs to be killed: [3428489] (in reverse order)
[2026-03-12 19:57:54] 2026-03-12 16:21:47,094 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 19:57:54] 2026-03-12 16:21:47,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 19:57:54] 2026-03-12 16:21:47,365 | INFO     | did not find any defunct processes belonging to 3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:48,083 | INFO     | did not find any defunct processes belonging to 3428489
[2026-03-12 19:57:54] 2026-03-12 16:21:48,084 | INFO     | ready for new job
[2026-03-12 19:57:54] 2026-03-12 16:21:48,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 19:57:54] 2026-03-12 16:21:48,094 | INFO     | **************************************
[2026-03-12 19:57:54] 2026-03-12 16:21:48,094 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 19:57:54] 2026-03-12 16:21:48,094 | INFO     | **************************************
[2026-03-12 19:57:54] 2026-03-12 16:21:48,094 | INFO     | 
[2026-03-12 19:57:54] 2026-03-12 16:21:48,145 | INFO     | architecture information:
[2026-03-12 19:57:54] 2026-03-12 16:21:48,170 | INFO     | executing command: cat /etc/os-release
[2026-03-12 19:57:54] 2026-03-12 16:21:48,359 | INFO     | cat /etc/os-release:
[2026-03-12 19:57:54] NAME="CentOS Linux"
[2026-03-12 19:57:54] VERSION="7 (Core)"
[2026-03-12 19:57:54] ID="centos"
[2026-03-12 19:57:54] ID_LIKE="rhel fedora"
[2026-03-12 19:57:54] VERSION_ID="7"
[2026-03-12 19:57:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 19:57:54] ANSI_COLOR="0;31"
[2026-03-12 19:57:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 19:57:54] HOME_URL="https://www.centos.org/"
[2026-03-12 19:57:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 19:57:54] 
[2026-03-12 19:57:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 19:57:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 19:57:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 19:57:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 19:57:54] 
[2026-03-12 19:57:54] 2026-03-12 16:21:48,359 | INFO     | **************************************
[2026-03-12 19:57:54] 2026-03-12 16:21:48,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 19:57:54] 2026-03-12 16:21:48,959 | INFO     | sufficient remaining disk space (62178459648 B)
[2026-03-12 19:57:54] 2026-03-12 16:21:48,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 19:57:54] 2026-03-12 16:21:48,960 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 19:57:54] 2026-03-12 16:21:48,960 | INFO     | update_server=False
[2026-03-12 19:57:54] 2026-03-12 16:21:48,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 19:57:54] 2026-03-12 16:21:48,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:57:54] 2026-03-12 16:21:48,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 19:57:54] 2026-03-12 16:21:49,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 19:57:54] 2026-03-12 16:21:49,130 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 19:57:54] 2026-03-12 16:21:49,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 19:57:54] 2026-03-12 16:21:49,130 | INFO     | will abort loop
[2026-03-12 19:57:54] 2026-03-12 16:21:49,556 | INFO     | all payload control threads have been joined
[2026-03-12 19:57:54] 2026-03-12 16:21:49,652 | INFO     | all data control threads have been joined
[2026-03-12 19:57:54] 2026-03-12 16:21:49,965 | INFO     | [job] retrieve thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:49,969 | INFO     | [job] queue monitor thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,158 | INFO     | [job] job monitor thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,289 | INFO     | all job control threads have been joined
[2026-03-12 19:57:54] 2026-03-12 16:21:50,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 19:57:54] 2026-03-12 16:21:50,562 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,563 | INFO     | [payload] control thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,571 | INFO     | [job] validate thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,579 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,666 | INFO     | [data] control thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,890 | INFO     | [payload] failed_post thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,917 | INFO     | [payload] validate_post thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,925 | INFO     | [data] copytool_in thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:50,971 | INFO     | [data] copytool_out thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:51,062 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:51,121 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:51,296 | INFO     | [job] control thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:21:54,541 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 19:57:54] 2026-03-12 16:22:19,809 | INFO     | PID=3421769 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 19:57:54] 2026-03-12 16:22:19,809 | INFO     | .. there are 11 such processes running
[2026-03-12 19:57:54] 2026-03-12 16:22:19,809 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 19:57:54] 2026-03-12 16:22:19,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 19:57:54] 2026-03-12 16:22:19,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 19:57:54] 2026-03-12 16:22:32,256 | INFO     | [monitor] cgroup control has ended
[2026-03-12 19:57:54] 2026-03-12 16:22:32,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875217434432)>', '<ExcThread(monitor, started 139874854229760)>']
[2026-03-12 19:57:54] 2026-03-12 16:22:32,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 19:57:54] 2026-03-12 16:22:32,943 | INFO     | [monitor] control thread has ended
[2026-03-12 19:57:54] 2026-03-12 16:22:37,940 | INFO     | all workflow threads have been joined
[2026-03-12 19:57:54] 2026-03-12 16:22:37,940 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 19:57:54] 2026-03-12 16:22:37,940 | INFO     | traces error code: 0
[2026-03-12 19:57:54] 2026-03-12 16:22:37,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 19:57:54] 2026-03-12 16:22:40,515 [wrapper] ==== pilot stdout END ====
[2026-03-12 19:57:54] 2026-03-12 16:22:40,561 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 19:57:54] 2026-03-12 16:22:40,585 [wrapper] pilotpid: 3421769
[2026-03-12 19:57:54] 2026-03-12 16:22:40,654 [wrapper] Pilot exit status: 0
[2026-03-12 19:57:54] 2026-03-12 16:22:40,820 [wrapper] pandaids: 7050442254
[2026-03-12 19:57:54] 2026-03-12 16:22:41,599 [wrapper] cleanup supervisor_pilot  350903 3421770
[2026-03-12 19:57:54] 2026-03-12 16:22:41,630 [wrapper] Test setup, not cleaning
[2026-03-12 19:57:54] 2026-03-12 16:22:41,695 [wrapper] apfmon messages muted
[2026-03-12 19:57:54] 2026-03-12 16:22:41,738 [wrapper] ==== wrapper stdout END ====
[2026-03-12 19:57:54] 2026-03-12 16:22:41,790 [wrapper] ==== wrapper stderr END ====
[2026-03-12 19:57:54]  *** Error codes and diagnostics ***
[2026-03-12 19:57:54]     "exeErrorCode": 0,
[2026-03-12 19:57:54]     "exeErrorDiag": "",
[2026-03-12 19:57:54]     "pilotErrorCode": 0,
[2026-03-12 19:57:54]     "pilotErrorDiag": "",
[2026-03-12 19:57:54]  *** Listing of results directory ***
[2026-03-12 19:57:54] total 428476
[2026-03-12 19:57:54] -rwx------. 1 boincer umatlas     36322 Mar 11 20:09 runpilot2-wrapper.sh
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 20:10 pilot3.tar.gz
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 20:10 queuedata.json
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 19:57:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:19 run_atlas
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:19 job.xml
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas 220824176 Mar 12 00:19 EVNT.48967092._000268.pool.root.1
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:19 start_atlas.sh
[2026-03-12 19:57:54] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:19 shared
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas    597527 Mar 12 00:19 input.tar.gz
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:19 boinc_lockfile
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas      2597 Mar 12 00:19 pandaJob.out
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas        57 Mar 12 00:19 setup.sh.local
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas   1006235 Mar 12 00:21 agis_schedconf.cvmfs.json
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas       434 Mar 12 00:21 workernode_map.json
[2026-03-12 19:57:54] drwx------. 5 boincer umatlas      4096 Mar 12 00:22 pilot3
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas 202894873 Mar 12 12:18 HITS.48967094._005989.pool.root.1
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas       528 Mar 12 12:18 boinc_task_state.xml
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas      1043 Mar 12 12:21 memory_monitor_summary.json
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas   1511578 Mar 12 12:21 agis_ddmendpoints.agis.ALL.json
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas    774077 Mar 12 12:21 log.48967094._005989.job.log.tgz.1
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas        95 Mar 12 12:21 pilot_heartbeat.json
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas      6382 Mar 12 12:21 heartbeat.json
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas      5006 Mar 12 12:22 pilotlog.txt
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas   4779865 Mar 12 12:22 log.48967094._005989.job.log.1
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas       357 Mar 12 12:22 output.list
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas       620 Mar 12 12:22 runtime_log
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas   5570560 Mar 12 12:22 result.tar.gz
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas       658 Mar 12 12:22 ZP0MDmnniK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsiiLDmMe8z9n.diag
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 12:22 runtime_log.err
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas      6611 Mar 12 19:56 init_data.xml
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas        25 Mar 12 19:57 wrapper_checkpoint.txt
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 19:57 boinc_mmap_file
[2026-03-12 19:57:54] -rw-r--r--. 1 boincer umatlas     21259 Mar 12 19:57 stderr.txt
[2026-03-12 19:57:54] HITS file was successfully produced:
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas 202894873 Mar 12 12:18 shared/HITS.pool.root.1
[2026-03-12 19:57:54]  *** Contents of shared directory: ***
[2026-03-12 19:57:54] total 419836
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas 220824176 Mar 12 00:19 ATLAS.root_0
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:19 start_atlas.sh
[2026-03-12 19:57:54] -rw-r--r--. 2 boincer umatlas    597527 Mar 12 00:19 input.tar.gz
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas 202894873 Mar 12 12:18 HITS.pool.root.1
[2026-03-12 19:57:54] -rw-------. 1 boincer umatlas   5570560 Mar 12 12:22 result.tar.gz
19:57:56 (3415666): run_atlas exited; CPU time 72765.650466
19:57:56 (3415666): called boinc_finish(0)

</stderr_txt>
]]>

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