Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:57 (255142): wrapper (7.7.26015): starting
20:48:57 (255142): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 20:48:57] Arguments: --nthreads 4
[2026-03-13 20:48:57] Threads: 4
[2026-03-13 20:48:57] Checking for CVMFS
[2026-03-13 20:48:57] No cvmfs_config command found, will try listing directly
[2026-03-13 20:48:57] CVMFS is ok
[2026-03-13 20:48:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 20:48:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 20:48:57] Further information can be found at the LHC@home message board.
[2026-03-13 20:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 20:48:57] Checking for apptainer binary...
[2026-03-13 20:48:57] which: no apptainer in ((null))
[2026-03-13 20:48:57] apptainer is not installed, using version from CVMFS
[2026-03-13 20:48:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 20:48:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-13 20:48:57] apptainer works
[2026-03-13 20:48:57] Set ATHENA_PROC_NUMBER=4
[2026-03-13 20:48:57] Set ATHENA_CORE_NUMBER=4
[2026-03-13 20:48:57] Starting ATLAS job with PandaID=7050439173
[2026-03-13 20:48:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 00:50:44]  *** The last 200 lines of the pilot log: ***
[2026-03-14 00:50:44] 2026-03-13 23:50:05,287 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 00:50:44] 2026-03-13 23:50:05,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 00:50:44] 2026-03-13 23:50:05,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 00:50:44] 2026-03-13 23:50:05,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 00:50:44] 2026-03-13 23:50:05,292 | INFO     | fitting pss+swap vs Time
[2026-03-14 00:50:44] 2026-03-13 23:50:05,293 | INFO     | sum of square deviations: 4127772278.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,295 | INFO     | sum of deviations: 12420684030.999994
[2026-03-14 00:50:44] 2026-03-13 23:50:05,295 | INFO     | mean x: 1773438575.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,295 | INFO     | mean y: 2313543.7130801687
[2026-03-14 00:50:44] 2026-03-13 23:50:05,295 | INFO     | intersect: -5334056465.325942
[2026-03-14 00:50:44] 2026-03-13 23:50:05,295 | INFO     | chi2: 2.1580250341215645
[2026-03-14 00:50:44] 2026-03-13 23:50:05,296 | INFO     | sum of square deviations: 3871990738.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,297 | INFO     | sum of deviations: 26907430589.499996
[2026-03-14 00:50:44] 2026-03-13 23:50:05,297 | INFO     | mean x: 1773438422.5
[2026-03-14 00:50:44] 2026-03-13 23:50:05,298 | INFO     | mean y: 2322028.2801724137
[2026-03-14 00:50:44] 2026-03-13 23:50:05,298 | INFO     | intersect: -12321744449.941635
[2026-03-14 00:50:44] 2026-03-13 23:50:05,298 | INFO     | chi2: 1.3505417891246603
[2026-03-14 00:50:44] 2026-03-13 23:50:05,298 | INFO     | current chi2=1.3505417891246603 (change=37.41769591313358 %)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,298 | INFO     | sum of square deviations: 3627000098.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,300 | INFO     | sum of deviations: 26163984214.000004
[2026-03-14 00:50:44] 2026-03-13 23:50:05,300 | INFO     | mean x: 1773438270.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,300 | INFO     | mean y: 2321565.475770925
[2026-03-14 00:50:44] 2026-03-13 23:50:05,300 | INFO     | intersect: -12790678061.507828
[2026-03-14 00:50:44] 2026-03-13 23:50:05,301 | INFO     | chi2: 1.3511835278163442
[2026-03-14 00:50:44] 2026-03-13 23:50:05,301 | INFO     | current chi2=1.3511835278163442 (change=-0.04751712955878777 %)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,301 | INFO     | right removable region: 226
[2026-03-14 00:50:44] 2026-03-13 23:50:05,301 | INFO     | sum of square deviations: 3871990738.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,303 | INFO     | sum of deviations: -18426098254.500004
[2026-03-14 00:50:44] 2026-03-13 23:50:05,303 | INFO     | mean x: 1773438727.5
[2026-03-14 00:50:44] 2026-03-13 23:50:05,303 | INFO     | mean y: 2331741.6594827585
[2026-03-14 00:50:44] 2026-03-13 23:50:05,303 | INFO     | intersect: 8441803437.846804
[2026-03-14 00:50:44] 2026-03-13 23:50:05,303 | INFO     | chi2: 0.8428320348306995
[2026-03-14 00:50:44] 2026-03-13 23:50:05,304 | INFO     | current chi2=0.8428320348306995 (change=60.94428834215175 %)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,304 | INFO     | sum of square deviations: 3627000098.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,305 | INFO     | sum of deviations: -16735754918.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | mean x: 1773438880.0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | mean y: 2330685.207048458
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | intersect: 8185357334.171979
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | chi2: 0.8419327112828023
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | current chi2=0.8419327112828023 (change=0.10670258257065086 %)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,306 | INFO     | left removable region: 20
[2026-03-14 00:50:44] 2026-03-13 23:50:05,307 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 00:50:44] 2026-03-13 23:50:05,308 | INFO     | sum of deviations: 2288714815.0000005
[2026-03-14 00:50:44] 2026-03-13 23:50:05,308 | INFO     | mean x: 1773438849.5
[2026-03-14 00:50:44] 2026-03-13 23:50:05,308 | INFO     | mean y: 2336415.854368932
[2026-03-14 00:50:44] 2026-03-13 23:50:05,308 | INFO     | intersect: -1495064339.9752886
[2026-03-14 00:50:44] 2026-03-13 23:50:05,309 | INFO     | chi2: 0.006828074698526851
[2026-03-14 00:50:44] 2026-03-13 23:50:05,309 | INFO     | current memory leak: 0.84 B/s (using 206 data points, chi2=0.01)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,309 | INFO     | could have reported an average CPU frequency of 2594 MHz (11 samples)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | ..............................
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . Timing measurements:
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . get job = 0 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . initial setup = 6 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . payload setup = 6 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . stage-in = 0 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . payload execution = 14428 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . stage-out = 1 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | . log creation = 0 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,310 | INFO     | ..............................
[2026-03-14 00:50:44] 2026-03-13 23:50:05,775 | INFO     | 
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | job summary report
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | --------------------------------------------------
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | PanDA job id: 7050439173
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | task id: 48967094
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | errors: (none)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | pilot state: finished 
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | transexitcode: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | exeerrorcode: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | exeerrordiag: 
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | exitcode: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,776 | INFO     | exitmsg: OK
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | cpuconsumptiontime: 55114 s
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | nevents: 400
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | neventsw: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | pid: 264057
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | pgrp: 264057
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | corecount: 4
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | event service: False
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | sizes: {0: 2279802, 1: 2280263, 12: 2280263, 14437: 2311160, 14438: 2311159, 14439: 2320557}
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | --------------------------------------------------
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | 
[2026-03-14 00:50:44] 2026-03-13 23:50:05,777 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-14 00:50:44] 2026-03-13 23:50:05,801 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,801 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | job 7050439173 has completed (purged errors)
[2026-03-14 00:50:44] 2026-03-13 23:50:05,803 | INFO     | overall cleanup function is called
[2026-03-14 00:50:44] 2026-03-13 23:50:06,811 | INFO     | --- collectZombieJob: --- 10, [264057]
[2026-03-14 00:50:44] 2026-03-13 23:50:06,812 | INFO     | zombie collector waiting for pid 264057
[2026-03-14 00:50:44] 2026-03-13 23:50:06,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 00:50:44] 2026-03-13 23:50:06,812 | INFO     | collected zombie processes
[2026-03-14 00:50:44] 2026-03-13 23:50:06,812 | INFO     | will attempt to kill all subprocesses of pid=264057
[2026-03-14 00:50:44] 2026-03-13 23:50:07,744 | INFO     | process IDs to be killed: [264057] (in reverse order)
[2026-03-14 00:50:44] 2026-03-13 23:50:07,778 | WARNING  | process 264057 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 00:50:44] 2026-03-13 23:50:07,873 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 00:50:44] 2026-03-13 23:50:07,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 00:50:44] 2026-03-13 23:50:07,913 | INFO     | did not find any defunct processes belonging to 264057
[2026-03-14 00:50:44] 2026-03-13 23:50:07,950 | INFO     | did not find any defunct processes belonging to 264057
[2026-03-14 00:50:44] 2026-03-13 23:50:07,951 | INFO     | ready for new job
[2026-03-14 00:50:44] 2026-03-13 23:50:07,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 00:50:44] 2026-03-13 23:50:07,954 | INFO     | **************************************
[2026-03-14 00:50:44] 2026-03-13 23:50:07,954 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 00:50:44] 2026-03-13 23:50:07,954 | INFO     | **************************************
[2026-03-14 00:50:44] 2026-03-13 23:50:07,954 | INFO     | 
[2026-03-14 00:50:44] 2026-03-13 23:50:07,959 | INFO     | architecture information:
[2026-03-14 00:50:44] 2026-03-13 23:50:07,960 | INFO     | executing command: cat /etc/os-release
[2026-03-14 00:50:44] 2026-03-13 23:50:07,977 | INFO     | cat /etc/os-release:
[2026-03-14 00:50:44] NAME="CentOS Linux"
[2026-03-14 00:50:44] VERSION="7 (Core)"
[2026-03-14 00:50:44] ID="centos"
[2026-03-14 00:50:44] ID_LIKE="rhel fedora"
[2026-03-14 00:50:44] VERSION_ID="7"
[2026-03-14 00:50:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 00:50:44] ANSI_COLOR="0;31"
[2026-03-14 00:50:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 00:50:44] HOME_URL="https://www.centos.org/"
[2026-03-14 00:50:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 00:50:44] 
[2026-03-14 00:50:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 00:50:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 00:50:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 00:50:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 00:50:44] 
[2026-03-14 00:50:44] 2026-03-13 23:50:07,978 | INFO     | **************************************
[2026-03-14 00:50:44] 2026-03-13 23:50:08,130 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 00:50:44] 2026-03-13 23:50:08,481 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-14 00:50:44] 2026-03-13 23:50:08,501 | INFO     | sufficient remaining disk space (20410531840 B)
[2026-03-14 00:50:44] 2026-03-13 23:50:08,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 00:50:44] 2026-03-13 23:50:08,502 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 00:50:44] 2026-03-13 23:50:08,502 | INFO     | update_server=False
[2026-03-14 00:50:44] 2026-03-13 23:50:08,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 00:50:44] 2026-03-13 23:50:08,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 00:50:44] 2026-03-13 23:50:08,514 | INFO     | number of running child processes to parent process 264057: 1
[2026-03-14 00:50:44] 2026-03-13 23:50:08,515 | INFO     | maximum number of monitored processes: 6
[2026-03-14 00:50:44] 2026-03-13 23:50:08,515 | INFO     | aborting job monitoring since job object (job id=7050439173) has expired
[2026-03-14 00:50:44] 2026-03-13 23:50:08,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 00:50:44] 2026-03-13 23:50:08,515 | INFO     | will abort loop
[2026-03-14 00:50:44] 2026-03-13 23:50:08,935 | INFO     | all payload control threads have been joined
[2026-03-14 00:50:44] 2026-03-13 23:50:09,142 | INFO     | all data control threads have been joined
[2026-03-14 00:50:44] 2026-03-13 23:50:09,508 | INFO     | [job] retrieve thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:09,520 | INFO     | [job] job monitor thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:09,542 | INFO     | [data] copytool_in thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:09,543 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:09,548 | INFO     | all job control threads have been joined
[2026-03-14 00:50:44] 2026-03-13 23:50:09,941 | INFO     | [payload] control thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,021 | INFO     | [payload] failed_post thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,149 | INFO     | [data] control thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 00:50:44] 2026-03-13 23:50:10,445 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,507 | INFO     | [data] copytool_out thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,553 | INFO     | [job] control thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,594 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:10,695 | INFO     | [job] validate thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:11,098 | INFO     | [payload] validate_post thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:11,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 00:50:44] 2026-03-13 23:50:11,420 | INFO     | [job] queue monitor thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:15,283 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:19,003 | INFO     | job.realtimelogging is not enabled
[2026-03-14 00:50:44] 2026-03-13 23:50:20,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 00:50:44] 2026-03-13 23:50:37,942 | INFO     | PID=259280 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 00:50:44] 2026-03-13 23:50:37,943 | INFO     | .. there are 12 such processes running
[2026-03-14 00:50:44] 2026-03-13 23:50:37,943 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 00:50:44] 2026-03-13 23:50:37,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 00:50:44] 2026-03-13 23:50:37,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 00:50:44] 2026-03-13 23:50:38,108 | INFO     | [monitor] cgroup control has ended
[2026-03-14 00:50:44] 2026-03-13 23:50:39,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22497946928960)>', '<ExcThread(monitor, started 22497640572672)>']
[2026-03-14 00:50:44] 2026-03-13 23:50:39,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 00:50:44] 2026-03-13 23:50:39,953 | INFO     | [monitor] control thread has ended
[2026-03-14 00:50:44] 2026-03-13 23:50:44,608 | INFO     | all workflow threads have been joined
[2026-03-14 00:50:44] 2026-03-13 23:50:44,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 00:50:44] 2026-03-13 23:50:44,609 | INFO     | traces error code: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:44,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 00:50:44] 2026-03-13 23:50:44,752 [wrapper] ==== pilot stdout END ====
[2026-03-14 00:50:44] 2026-03-13 23:50:44,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 00:50:44] 2026-03-13 23:50:44,758 [wrapper] pilotpid: 259280
[2026-03-14 00:50:44] 2026-03-13 23:50:44,760 [wrapper] Pilot exit status: 0
[2026-03-14 00:50:44] 2026-03-13 23:50:44,770 [wrapper] pandaids: 7050439173
[2026-03-14 00:50:44] 2026-03-13 23:50:44,840 [wrapper] cleanup supervisor_pilot  550998 259281
[2026-03-14 00:50:44] 2026-03-13 23:50:44,844 [wrapper] Test setup, not cleaning
[2026-03-14 00:50:44] 2026-03-13 23:50:44,846 [wrapper] apfmon messages muted
[2026-03-14 00:50:44] 2026-03-13 23:50:44,849 [wrapper] ==== wrapper stdout END ====
[2026-03-14 00:50:44] 2026-03-13 23:50:44,851 [wrapper] ==== wrapper stderr END ====
[2026-03-14 00:50:44]  *** Error codes and diagnostics ***
[2026-03-14 00:50:44]     "exeErrorCode": 0,
[2026-03-14 00:50:44]     "exeErrorDiag": "",
[2026-03-14 00:50:44]     "pilotErrorCode": 0,
[2026-03-14 00:50:44]     "pilotErrorDiag": "",
[2026-03-14 00:50:44]  *** Listing of results directory ***
[2026-03-14 00:50:44] total 418572
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc    585013 Mar 12 00:24 pilot3.tar.gz
[2026-03-14 00:50:44] -rwx------. 1 boinc boinc     36322 Mar 12 01:08 runpilot2-wrapper.sh
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc      5111 Mar 12 01:09 queuedata.json
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc       100 Mar 13 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 00:50:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 20:48 run_atlas
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc       105 Mar 13 20:48 job.xml
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc 218166346 Mar 13 20:48 EVNT.48967092._000225.pool.root.1
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc      6563 Mar 13 20:48 init_data.xml
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 20:48 start_atlas.sh
[2026-03-14 00:50:44] drwxrwx--x. 2 boinc boinc      4096 Mar 13 20:48 shared
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc    597531 Mar 13 20:48 input.tar.gz
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc         0 Mar 13 20:48 boinc_lockfile
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc      2597 Mar 13 20:48 pandaJob.out
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc   1006705 Mar 13 20:49 agis_schedconf.cvmfs.json
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc       447 Mar 13 20:49 workernode_map.json
[2026-03-14 00:50:44] drwx------. 5 boinc boinc      4096 Mar 13 20:49 pilot3
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc 201632861 Mar 14 00:49 HITS.48967094._005351.pool.root.1
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc       530 Mar 14 00:49 boinc_task_state.xml
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc        95 Mar 14 00:49 pilot_heartbeat.json
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc      1035 Mar 14 00:50 memory_monitor_summary.json
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc   1511579 Mar 14 00:50 agis_ddmendpoints.agis.ALL.json
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc    418505 Mar 14 00:50 log.48967094._005351.job.log.tgz.1
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc      6399 Mar 14 00:50 heartbeat.json
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc      8192 Mar 14 00:50 boinc_mmap_file
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc        27 Mar 14 00:50 wrapper_checkpoint.txt
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc      5318 Mar 14 00:50 pilotlog.txt
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc   2019946 Mar 14 00:50 log.48967094._005351.job.log.1
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc       357 Mar 14 00:50 output.list
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc       620 Mar 14 00:50 runtime_log
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc   2457600 Mar 14 00:50 result.tar.gz
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc      9205 Mar 14 00:50 runtime_log.err
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc       665 Mar 14 00:50 MD4MDmpmiK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmAhiLDmEadYQn.diag
[2026-03-14 00:50:44] -rw-r--r--. 1 boinc boinc     20847 Mar 14 00:50 stderr.txt
[2026-03-14 00:50:44] HITS file was successfully produced:
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc 201632861 Mar 14 00:49 shared/HITS.pool.root.1
[2026-03-14 00:50:44]  *** Contents of shared directory: ***
[2026-03-14 00:50:44] total 412972
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc 218166346 Mar 13 20:48 ATLAS.root_0
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 20:48 start_atlas.sh
[2026-03-14 00:50:44] -rw-r--r--. 2 boinc boinc    597531 Mar 13 20:48 input.tar.gz
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc 201632861 Mar 14 00:49 HITS.pool.root.1
[2026-03-14 00:50:44] -rw-------. 1 boinc boinc   2457600 Mar 14 00:50 result.tar.gz
00:50:46 (255142): run_atlas exited; CPU time 55687.281968
00:50:46 (255142): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN