Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:34 (1001964): wrapper (7.7.26015): starting
00:05:34 (1001964): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:05:34] Arguments: --nthreads 8
[2026-03-12 00:05:34] Threads: 8
[2026-03-12 00:05:34] Checking for CVMFS
[2026-03-12 00:05:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:05:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:05:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:05:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:05:39] 2.13.3.0 9185 182142 350880 157181 2 423 27879874 32935936 29396 16776704 0 743990091 99.705 578452051 32855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 00:05:39] CVMFS is ok
[2026-03-12 00:05:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:05:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:05:39] Further information can be found at the LHC@home message board.
[2026-03-12 00:05:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:05:39] Checking for apptainer binary...
[2026-03-12 00:05:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:05:39] Running /usr/bin/apptainer --version
[2026-03-12 00:05:39] apptainer version 1.4.5-2.el9
[2026-03-12 00:05:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:05:41] c-5-6.aglt2.org
[2026-03-12 00:05:41] apptainer works
[2026-03-12 00:05:42] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:05:42] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:05:42] Starting ATLAS job with PandaID=7050441025
[2026-03-12 00:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 02:54:59]  *** The last 200 lines of the pilot log: ***
[2026-03-14 02:54:59] 2026-03-14 06:53:47,812 | INFO     | preparing for final server update for job 7050441025 in state='finished'
[2026-03-14 02:54:59] 2026-03-14 06:53:47,812 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7050441025/jobReport.json
[2026-03-14 02:54:59] 2026-03-14 06:53:47,825 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-14 02:54:59] 2026-03-14 06:53:47,826 | INFO     | this job has now completed (state=finished)
[2026-03-14 02:54:59] 2026-03-14 06:53:47,826 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 02:54:59] 2026-03-14 06:53:47,826 | INFO     | log transfer has been attempted: DONE
[2026-03-14 02:54:59] 2026-03-14 06:53:47,826 | INFO     | job 7050441025 has finished - writing final server update
[2026-03-14 02:54:59] 2026-03-14 06:53:47,826 | INFO     | total number of processed events: 400 (read)
[2026-03-14 02:54:59] 2026-03-14 06:53:47,925 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7050441025/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 02:54:59] 2026-03-14 06:53:47,926 | INFO     | extracted standard info from prmon json
[2026-03-14 02:54:59] 2026-03-14 06:53:47,926 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 02:54:59] 2026-03-14 06:53:47,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 02:54:59] 2026-03-14 06:53:47,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 02:54:59] 2026-03-14 06:53:47,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 02:54:59] 2026-03-14 06:53:48,349 | INFO     | fitting pss+swap vs Time
[2026-03-14 02:54:59] 2026-03-14 06:53:48,397 | INFO     | sum of square deviations: 8305453601039.58
[2026-03-14 02:54:59] 2026-03-14 06:53:49,478 | INFO     | monitor loop #9786: job 0:7050441025 is in state 'finished'
[2026-03-14 02:54:59] 2026-03-14 06:53:49,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 02:54:59] 2026-03-14 06:53:49,645 | INFO     | time since job start (182685s) is within the limit (345600.0s)
[2026-03-14 02:54:59] 2026-03-14 06:53:50,858 | INFO     | sum of deviations: 8075644649063.51
[2026-03-14 02:54:59] 2026-03-14 06:53:50,859 | INFO     | mean x: 1773379931.0497994
[2026-03-14 02:54:59] 2026-03-14 06:53:50,859 | INFO     | mean y: 2477328.5939171123
[2026-03-14 02:54:59] 2026-03-14 06:53:50,859 | INFO     | intersect: -1721833809.4691947
[2026-03-14 02:54:59] 2026-03-14 06:53:50,863 | INFO     | chi2: 16.5018659611411
[2026-03-14 02:54:59] 2026-03-14 06:53:50,867 | INFO     | sum of square deviations: 8263884995915.263
[2026-03-14 02:54:59] 2026-03-14 06:53:51,071 | INFO     | sum of deviations: 8838961830353.807
[2026-03-14 02:54:59] 2026-03-14 06:53:51,072 | INFO     | mean x: 1773379778.5500503
[2026-03-14 02:54:59] 2026-03-14 06:53:51,072 | INFO     | mean y: 2480128.034817543
[2026-03-14 02:54:59] 2026-03-14 06:53:51,072 | INFO     | intersect: -1894307663.7934887
[2026-03-14 02:54:59] 2026-03-14 06:53:51,076 | INFO     | chi2: 13.615579198130543
[2026-03-14 02:54:59] 2026-03-14 06:53:51,076 | INFO     | current chi2=13.615579198130543 (change=17.490669054076903 %)
[2026-03-14 02:54:59] 2026-03-14 06:53:51,076 | INFO     | right removable region: 2986
[2026-03-14 02:54:59] 2026-03-14 06:53:51,080 | INFO     | sum of square deviations: 8263885087047.46
[2026-03-14 02:54:59] 2026-03-14 06:53:51,686 | INFO     | time since job start (182687s) is within the limit (345600.0s)
[2026-03-14 02:54:59] 2026-03-14 06:53:52,354 | INFO     | monitor loop #9787: job 0:7050441025 is in state 'finished'
[2026-03-14 02:54:59] 2026-03-14 06:53:52,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 02:54:59] 2026-03-14 06:53:52,559 | INFO     | sum of deviations: 7065274472142.433
[2026-03-14 02:54:59] 2026-03-14 06:53:52,560 | INFO     | mean x: 1773380083.5493805
[2026-03-14 02:54:59] 2026-03-14 06:53:52,560 | INFO     | mean y: 2481035.01071309
[2026-03-14 02:54:59] 2026-03-14 06:53:52,560 | INFO     | intersect: -1513684412.805768
[2026-03-14 02:54:59] 2026-03-14 06:53:52,564 | INFO     | chi2: 12.412521526610819
[2026-03-14 02:54:59] 2026-03-14 06:53:52,564 | INFO     | current chi2=12.412521526610819 (change=24.78110320469179 %)
[2026-03-14 02:54:59] 2026-03-14 06:53:52,564 | INFO     | left removable region: 10
[2026-03-14 02:54:59] 2026-03-14 06:53:52,568 | INFO     | sum of square deviations: 8172922125310.442
[2026-03-14 02:54:59] 2026-03-14 06:53:53,793 | INFO     | time since job start (182689s) is within the limit (345600.0s)
[2026-03-14 02:54:59] 2026-03-14 06:53:54,959 | INFO     | monitor loop #9788: job 0:7050441025 is in state 'finished'
[2026-03-14 02:54:59] 2026-03-14 06:53:54,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 02:54:59] 2026-03-14 06:53:55,431 | INFO     | sum of deviations: 6959569436822.012
[2026-03-14 02:54:59] 2026-03-14 06:53:55,432 | INFO     | mean x: 1773380053.050403
[2026-03-14 02:54:59] 2026-03-14 06:53:55,432 | INFO     | mean y: 2487031.4200268816
[2026-03-14 02:54:59] 2026-03-14 06:53:55,432 | INFO     | intersect: -1507616873.6273472
[2026-03-14 02:54:59] 2026-03-14 06:53:55,517 | INFO     | chi2: 6.557712599630988
[2026-03-14 02:54:59] 2026-03-14 06:53:55,517 | INFO     | current memory leak: 0.85 B/s (using 2976 data points, chi2=6.56)
[2026-03-14 02:54:59] 2026-03-14 06:53:55,570 | INFO     | could have reported an average CPU frequency of 2600 MHz (104 samples)
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | ..............................
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | . Timing measurements:
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | . get job = 0 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | . initial setup = 80 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | . payload setup = 74 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,571 | INFO     | . stage-in = 2 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,572 | INFO     | . payload execution = 182557 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,572 | INFO     | . stage-out = 18 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,572 | INFO     | . log creation = 7 s
[2026-03-14 02:54:59] 2026-03-14 06:53:55,572 | INFO     | ..............................
[2026-03-14 02:54:59] 2026-03-14 06:53:55,799 | INFO     | time since job start (182691s) is within the limit (345600.0s)
[2026-03-14 02:54:59] 2026-03-14 06:53:56,802 | INFO     | 
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | job summary report
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | --------------------------------------------------
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | PanDA job id: 7050441025
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | task id: 48967094
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | errors: (none)
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | pilot state: finished 
[2026-03-14 02:54:59] 2026-03-14 06:53:56,804 | INFO     | transexitcode: 0
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | exeerrorcode: 0
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | exeerrordiag: 
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | exitcode: 0
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | exitmsg: OK
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | cpuconsumptiontime: 64163 s
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | nevents: 400
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | neventsw: 0
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | pid: 1037289
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | pgrp: 1037289
[2026-03-14 02:54:59] 2026-03-14 06:53:56,805 | INFO     | corecount: 8
[2026-03-14 02:54:59] 2026-03-14 06:53:56,806 | INFO     | event service: False
[2026-03-14 02:54:59] 2026-03-14 06:53:56,806 | INFO     | sizes: {0: 2279735, 2: 2279791, 3: 2279847, 5: 2279847, 6: 2279847, 7: 2280308, 8: 2280464, 19: 2280492, 182638: 2386885, 182641: 2386884, 182662: 2395938, 182663:
[2026-03-14 02:54:59] 2026-03-14 06:53:56,806 | INFO     | --------------------------------------------------
[2026-03-14 02:54:59] 2026-03-14 06:53:56,806 | INFO     | 
[2026-03-14 02:54:59] 2026-03-14 06:53:56,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-14 02:54:59] 2026-03-14 06:53:56,962 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,962 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,962 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,962 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,964 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 02:54:59] 2026-03-14 06:53:56,965 | INFO     | job 7050441025 has completed (purged errors)
[2026-03-14 02:54:59] 2026-03-14 06:53:56,965 | INFO     | overall cleanup function is called
[2026-03-14 02:54:59] 2026-03-14 06:53:57,994 | INFO     | --- collectZombieJob: --- 10, [1037289]
[2026-03-14 02:54:59] 2026-03-14 06:53:57,995 | INFO     | zombie collector waiting for pid 1037289
[2026-03-14 02:54:59] 2026-03-14 06:53:57,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 02:54:59] 2026-03-14 06:53:57,995 | INFO     | collected zombie processes
[2026-03-14 02:54:59] 2026-03-14 06:53:57,995 | INFO     | will attempt to kill all subprocesses of pid=1037289
[2026-03-14 02:54:59] 2026-03-14 06:53:59,842 | INFO     | process IDs to be killed: [1037289] (in reverse order)
[2026-03-14 02:54:59] 2026-03-14 06:54:01,367 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 02:54:59] 2026-03-14 06:54:01,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 02:54:59] 2026-03-14 06:54:01,613 | INFO     | did not find any defunct processes belonging to 1037289
[2026-03-14 02:54:59] 2026-03-14 06:54:01,868 | INFO     | did not find any defunct processes belonging to 1037289
[2026-03-14 02:54:59] 2026-03-14 06:54:01,868 | INFO     | ready for new job
[2026-03-14 02:54:59] 2026-03-14 06:54:01,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 02:54:59] 2026-03-14 06:54:02,106 | INFO     | **************************************
[2026-03-14 02:54:59] 2026-03-14 06:54:02,107 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 02:54:59] 2026-03-14 06:54:02,107 | INFO     | **************************************
[2026-03-14 02:54:59] 2026-03-14 06:54:02,107 | INFO     | 
[2026-03-14 02:54:59] 2026-03-14 06:54:02,147 | INFO     | architecture information:
[2026-03-14 02:54:59] 2026-03-14 06:54:02,168 | INFO     | executing command: cat /etc/os-release
[2026-03-14 02:54:59] 2026-03-14 06:54:02,401 | INFO     | cat /etc/os-release:
[2026-03-14 02:54:59] NAME="CentOS Linux"
[2026-03-14 02:54:59] VERSION="7 (Core)"
[2026-03-14 02:54:59] ID="centos"
[2026-03-14 02:54:59] ID_LIKE="rhel fedora"
[2026-03-14 02:54:59] VERSION_ID="7"
[2026-03-14 02:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 02:54:59] ANSI_COLOR="0;31"
[2026-03-14 02:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 02:54:59] HOME_URL="https://www.centos.org/"
[2026-03-14 02:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 02:54:59] 
[2026-03-14 02:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 02:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 02:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 02:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 02:54:59] 
[2026-03-14 02:54:59] 2026-03-14 06:54:02,401 | INFO     | **************************************
[2026-03-14 02:54:59] 2026-03-14 06:54:02,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-14 02:54:59] 2026-03-14 06:54:03,150 | INFO     | sufficient remaining disk space (73215770624 B)
[2026-03-14 02:54:59] 2026-03-14 06:54:03,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 02:54:59] 2026-03-14 06:54:03,150 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 02:54:59] 2026-03-14 06:54:03,150 | INFO     | update_server=False
[2026-03-14 02:54:59] 2026-03-14 06:54:03,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 02:54:59] 2026-03-14 06:54:03,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 02:54:59] 2026-03-14 06:54:03,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 02:54:59] 2026-03-14 06:54:03,561 | INFO     | aborting loop
[2026-03-14 02:54:59] 2026-03-14 06:54:03,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 02:54:59] 2026-03-14 06:54:03,717 | INFO     | all data control threads have been joined
[2026-03-14 02:54:59] 2026-03-14 06:54:03,842 | INFO     | all job control threads have been joined
[2026-03-14 02:54:59] 2026-03-14 06:54:04,163 | INFO     | [job] retrieve thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,223 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,490 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,516 | INFO     | [data] copytool_in thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,533 | INFO     | all payload control threads have been joined
[2026-03-14 02:54:59] 2026-03-14 06:54:04,567 | INFO     | [job] job monitor thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,572 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,735 | INFO     | [data] control thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,793 | INFO     | [job] validate thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,816 | INFO     | [payload] failed_post thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,846 | INFO     | [payload] validate_post thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:04,848 | INFO     | [job] control thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:05,196 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:05,539 | INFO     | [payload] control thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:05,635 | INFO     | [data] copytool_out thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:06,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 02:54:59] 2026-03-14 06:54:07,060 | INFO     | [job] queue monitor thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:07,165 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 02:54:59] 2026-03-14 06:54:35,166 | INFO     | PID=1015709 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 02:54:59] 2026-03-14 06:54:35,166 | INFO     | .. there are 42 such processes running
[2026-03-14 02:54:59] 2026-03-14 06:54:35,167 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 02:54:59] 2026-03-14 06:54:35,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 02:54:59] 2026-03-14 06:54:35,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 02:54:59] 2026-03-14 06:54:48,447 | INFO     | [monitor] cgroup control has ended
[2026-03-14 02:54:59] 2026-03-14 06:54:49,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827371931456)>', '<ExcThread(monitor, started 139826728781568)>']
[2026-03-14 02:54:59] 2026-03-14 06:54:50,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 02:54:59] 2026-03-14 06:54:50,343 | INFO     | [monitor] control thread has ended
[2026-03-14 02:54:59] 2026-03-14 06:54:54,794 | INFO     | all workflow threads have been joined
[2026-03-14 02:54:59] 2026-03-14 06:54:54,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 02:54:59] 2026-03-14 06:54:54,897 | INFO     | traces error code: 0
[2026-03-14 02:54:59] 2026-03-14 06:54:54,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 02:54:59] 2026-03-14 06:54:57,129 [wrapper] ==== pilot stdout END ====
[2026-03-14 02:54:59] 2026-03-14 06:54:57,171 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 02:54:59] 2026-03-14 06:54:57,225 [wrapper] pilotpid: 1015709
[2026-03-14 02:54:59] 2026-03-14 06:54:57,349 [wrapper] Pilot exit status: 0
[2026-03-14 02:54:59] 2026-03-14 06:54:57,538 [wrapper] pandaids: 7050441025
[2026-03-14 02:54:59] 2026-03-14 06:54:58,316 [wrapper] cleanup supervisor_pilot 1411942 1015710
[2026-03-14 02:54:59] 2026-03-14 06:54:58,336 [wrapper] Test setup, not cleaning
[2026-03-14 02:54:59] 2026-03-14 06:54:58,399 [wrapper] apfmon messages muted
[2026-03-14 02:54:59] 2026-03-14 06:54:58,436 [wrapper] ==== wrapper stdout END ====
[2026-03-14 02:54:59] 2026-03-14 06:54:58,500 [wrapper] ==== wrapper stderr END ====
[2026-03-14 02:54:59]  *** Error codes and diagnostics ***
[2026-03-14 02:54:59]     "exeErrorCode": 0,
[2026-03-14 02:54:59]     "exeErrorDiag": "",
[2026-03-14 02:54:59]     "pilotErrorCode": 0,
[2026-03-14 02:54:59]     "pilotErrorDiag": "",
[2026-03-14 02:54:59]  *** Listing of results directory ***
[2026-03-14 02:55:00] total 466020
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 19:24 pilot3.tar.gz
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 20:06 queuedata.json
[2026-03-14 02:55:00] -rwx------. 1 boincer umatlas     36322 Mar 11 20:06 runpilot2-wrapper.sh
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 02:55:00] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:05 run_atlas
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:05 job.xml
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas 217999062 Mar 12 00:05 EVNT.48967092._000245.pool.root.1
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:05 start_atlas.sh
[2026-03-14 02:55:00] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:05 shared
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas    597528 Mar 12 00:05 input.tar.gz
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:05 boinc_lockfile
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas      2597 Mar 12 00:05 pandaJob.out
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas        57 Mar 12 00:05 setup.sh.local
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas       430 Mar 12 00:08 workernode_map.json
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas   1006227 Mar 12 00:09 agis_schedconf.cvmfs.json
[2026-03-14 02:55:00] drwx------. 5 boincer umatlas      4096 Mar 12 00:09 pilot3
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas 208057921 Mar 14 02:48 HITS.48967094._005834.pool.root.1
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas       531 Mar 14 02:49 boinc_task_state.xml
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas      6659 Mar 14 02:49 init_data.xml
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas      1054 Mar 14 02:53 memory_monitor_summary.json
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas   1511579 Mar 14 02:53 agis_ddmendpoints.agis.ALL.json
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas   2453097 Mar 14 02:53 log.48967094._005834.job.log.tgz.1
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas      6399 Mar 14 02:53 heartbeat.json
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas        95 Mar 14 02:54 pilot_heartbeat.json
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas      4820 Mar 14 02:54 pilotlog.txt
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 02:54 boinc_mmap_file
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas        28 Mar 14 02:54 wrapper_checkpoint.txt
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas  21150040 Mar 14 02:54 log.48967094._005834.job.log.1
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas       357 Mar 14 02:54 output.list
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas       620 Mar 14 02:54 runtime_log
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas  23623680 Mar 14 02:54 result.tar.gz
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas      9328 Mar 14 02:54 runtime_log.err
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas       662 Mar 14 02:54 bPjNDm0kiK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCfiLDmkfA1No.diag
[2026-03-14 02:55:00] -rw-r--r--. 1 boincer umatlas     21647 Mar 14 02:54 stderr.txt
[2026-03-14 02:55:00] HITS file was successfully produced:
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas 208057921 Mar 14 02:48 shared/HITS.pool.root.1
[2026-03-14 02:55:00]  *** Contents of shared directory: ***
[2026-03-14 02:55:00] total 439752
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas 217999062 Mar 12 00:05 ATLAS.root_0
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:05 start_atlas.sh
[2026-03-14 02:55:00] -rw-r--r--. 2 boincer umatlas    597528 Mar 12 00:05 input.tar.gz
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas 208057921 Mar 14 02:48 HITS.pool.root.1
[2026-03-14 02:55:00] -rw-------. 1 boincer umatlas  23623680 Mar 14 02:54 result.tar.gz
02:55:02 (1001964): run_atlas exited; CPU time 73999.682898
02:55:02 (1001964): called boinc_finish(0)

</stderr_txt>
]]>

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