Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:15 (119758): wrapper (7.7.26015): starting
21:38:15 (119758): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 21:38:15] Arguments: --nthreads 4
[2026-03-13 21:38:15] Threads: 4
[2026-03-13 21:38:15] Checking for CVMFS
[2026-03-13 21:38:15] No cvmfs_config command found, will try listing directly
[2026-03-13 21:38:15] CVMFS is ok
[2026-03-13 21:38:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 21:38:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 21:38:15] Further information can be found at the LHC@home message board.
[2026-03-13 21:38:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 21:38:15] Checking for apptainer binary...
[2026-03-13 21:38:15] which: no apptainer in ((null))
[2026-03-13 21:38:15] apptainer is not installed, using version from CVMFS
[2026-03-13 21:38:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 21:38:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-13 21:38:15] apptainer works
[2026-03-13 21:38:15] Set ATHENA_PROC_NUMBER=4
[2026-03-13 21:38:15] Set ATHENA_CORE_NUMBER=4
[2026-03-13 21:38:15] Starting ATLAS job with PandaID=7050112185
[2026-03-13 21:38:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 01:42:00]  *** The last 200 lines of the pilot log: ***
[2026-03-14 01:42:01] 2026-03-14 00:40:58,964 | INFO     | time since job start (14548s) is within the limit (345600.0s)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,092 | INFO     | job 7050112185 has state=finished
[2026-03-14 01:42:01] 2026-03-14 00:40:59,092 | INFO     | preparing for final server update for job 7050112185 in state='finished'
[2026-03-14 01:42:01] 2026-03-14 00:40:59,092 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7050112185/jobReport.json
[2026-03-14 01:42:01] 2026-03-14 00:40:59,095 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/0/workernode_map.json
[2026-03-14 01:42:01] 2026-03-14 00:40:59,096 | INFO     | this job has now completed (state=finished)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,096 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,096 | INFO     | log transfer has been attempted: DONE
[2026-03-14 01:42:01] 2026-03-14 00:40:59,096 | INFO     | job 7050112185 has finished - writing final server update
[2026-03-14 01:42:01] 2026-03-14 00:40:59,096 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_567887/.job.ad'
[2026-03-14 01:42:01] 2026-03-14 00:40:59,097 | INFO     | total number of processed events: 400 (read)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,109 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7050112185/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,109 | INFO     | extracted standard info from prmon json
[2026-03-14 01:42:01] 2026-03-14 00:40:59,109 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 01:42:01] 2026-03-14 00:40:59,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 01:42:01] 2026-03-14 00:40:59,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 01:42:01] 2026-03-14 00:40:59,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 01:42:01] 2026-03-14 00:40:59,118 | INFO     | fitting pss+swap vs Time
[2026-03-14 01:42:01] 2026-03-14 00:40:59,118 | INFO     | sum of square deviations: 4180243959.5
[2026-03-14 01:42:01] 2026-03-14 00:40:59,120 | INFO     | sum of deviations: 21702931085.500004
[2026-03-14 01:42:01] 2026-03-14 00:40:59,120 | INFO     | mean x: 1773441561.5
[2026-03-14 01:42:01] 2026-03-14 00:40:59,120 | INFO     | mean y: 2320184.8865546216
[2026-03-14 01:42:01] 2026-03-14 00:40:59,120 | INFO     | intersect: -9205008470.161531
[2026-03-14 01:42:01] 2026-03-14 00:40:59,121 | INFO     | chi2: 1.3382674783532127
[2026-03-14 01:42:01] 2026-03-14 00:40:59,121 | INFO     | sum of square deviations: 3922276332.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,123 | INFO     | sum of deviations: 21122523558.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,123 | INFO     | mean x: 1773441409.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,123 | INFO     | mean y: 2319841.729613734
[2026-03-14 01:42:01] 2026-03-14 00:40:59,123 | INFO     | intersect: -9548143911.86173
[2026-03-14 01:42:01] 2026-03-14 00:40:59,124 | INFO     | chi2: 1.3388537625856258
[2026-03-14 01:42:01] 2026-03-14 00:40:59,124 | INFO     | current chi2=1.3388537625856258 (change=-0.04380919673356937 %)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,124 | INFO     | right removable region: 232
[2026-03-14 01:42:01] 2026-03-14 00:40:59,124 | INFO     | sum of square deviations: 3922276332.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | sum of deviations: -8761382786.000004
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | mean x: 1773441714.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | mean y: 2338001.17167382
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | intersect: 3963762538.817927
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | chi2: 0.015010101532484044
[2026-03-14 01:42:01] 2026-03-14 00:40:59,126 | INFO     | current chi2=0.015010101532484044 (change=98.87839301370795 %)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,127 | INFO     | sum of square deviations: 3675146117.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,128 | INFO     | sum of deviations: -8608159661.5
[2026-03-14 01:42:01] 2026-03-14 00:40:59,128 | INFO     | mean x: 1773441866.5
[2026-03-14 01:42:01] 2026-03-14 00:40:59,129 | INFO     | mean y: 2337893.9166666665
[2026-03-14 01:42:01] 2026-03-14 00:40:59,129 | INFO     | intersect: 4156205590.932798
[2026-03-14 01:42:01] 2026-03-14 00:40:59,129 | INFO     | chi2: 0.011900553354230257
[2026-03-14 01:42:01] 2026-03-14 00:40:59,129 | INFO     | current chi2=0.011900553354230257 (change=20.71637004935824 %)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,129 | INFO     | left removable region: 20
[2026-03-14 01:42:01] 2026-03-14 00:40:59,130 | INFO     | sum of square deviations: 2954447953.0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,131 | INFO     | sum of deviations: -4780977693.499999
[2026-03-14 01:42:01] 2026-03-14 00:40:59,131 | INFO     | mean x: 1773441988.5
[2026-03-14 01:42:01] 2026-03-14 00:40:59,131 | INFO     | mean y: 2335325.712264151
[2026-03-14 01:42:01] 2026-03-14 00:40:59,131 | INFO     | intersect: 2872173184.6345267
[2026-03-14 01:42:01] 2026-03-14 00:40:59,132 | INFO     | chi2: 0.008325102823101914
[2026-03-14 01:42:01] 2026-03-14 00:40:59,132 | INFO     | current memory leak: -1.62 B/s (using 212 data points, chi2=0.01)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,132 | INFO     | could have reported an average CPU frequency of 2598 MHz (12 samples)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | ..............................
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . Timing measurements:
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . get job = 0 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . initial setup = 6 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . payload setup = 6 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . stage-in = 0 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . payload execution = 14521 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . stage-out = 1 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | . log creation = 0 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,133 | INFO     | ..............................
[2026-03-14 01:42:01] 2026-03-14 00:40:59,265 | INFO     | 
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | job summary report
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | --------------------------------------------------
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | PanDA job id: 7050112185
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | task id: 48967011
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | errors: (none)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | pilot state: finished 
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | transexitcode: 0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | exeerrorcode: 0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,266 | INFO     | exeerrordiag: 
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | exitcode: 0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | exitmsg: OK
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | cpuconsumptiontime: 54195 s
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | nevents: 400
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | neventsw: 0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | pid: 135569
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | pgrp: 135569
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | corecount: 4
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | event service: False
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | sizes: {0: 2280253, 11: 2280253, 14531: 2311344, 14532: 2311343, 14533: 2320419, 14536: 2320475, 14537: 2320797}
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | --------------------------------------------------
[2026-03-14 01:42:01] 2026-03-14 00:40:59,267 | INFO     | 
[2026-03-14 01:42:01] 2026-03-14 00:40:59,268 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-03-14 01:42:01] 2026-03-14 00:40:59,303 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,303 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | job 7050112185 has completed (purged errors)
[2026-03-14 01:42:01] 2026-03-14 00:40:59,305 | INFO     | overall cleanup function is called
[2026-03-14 01:42:01] 2026-03-14 00:41:00,313 | INFO     | --- collectZombieJob: --- 10, [135569]
[2026-03-14 01:42:01] 2026-03-14 00:41:00,314 | INFO     | zombie collector waiting for pid 135569
[2026-03-14 01:42:01] 2026-03-14 00:41:00,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 01:42:01] 2026-03-14 00:41:00,314 | INFO     | collected zombie processes
[2026-03-14 01:42:01] 2026-03-14 00:41:00,314 | INFO     | will attempt to kill all subprocesses of pid=135569
[2026-03-14 01:42:01] 2026-03-14 00:41:00,818 | INFO     | process IDs to be killed: [135569] (in reverse order)
[2026-03-14 01:42:01] 2026-03-14 00:41:01,026 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 01:42:01] 2026-03-14 00:41:01,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 01:42:01] 2026-03-14 00:41:01,051 | INFO     | did not find any defunct processes belonging to 135569
[2026-03-14 01:42:01] 2026-03-14 00:41:01,074 | INFO     | did not find any defunct processes belonging to 135569
[2026-03-14 01:42:01] 2026-03-14 00:41:01,075 | INFO     | ready for new job
[2026-03-14 01:42:01] 2026-03-14 00:41:01,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 01:42:01] 2026-03-14 00:41:01,077 | INFO     | **************************************
[2026-03-14 01:42:01] 2026-03-14 00:41:01,077 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 01:42:01] 2026-03-14 00:41:01,077 | INFO     | **************************************
[2026-03-14 01:42:01] 2026-03-14 00:41:01,077 | INFO     | 
[2026-03-14 01:42:01] 2026-03-14 00:41:01,081 | INFO     | architecture information:
[2026-03-14 01:42:01] 2026-03-14 00:41:01,081 | INFO     | executing command: cat /etc/os-release
[2026-03-14 01:42:01] 2026-03-14 00:41:01,116 | INFO     | cat /etc/os-release:
[2026-03-14 01:42:01] NAME="CentOS Linux"
[2026-03-14 01:42:01] VERSION="7 (Core)"
[2026-03-14 01:42:01] ID="centos"
[2026-03-14 01:42:01] ID_LIKE="rhel fedora"
[2026-03-14 01:42:01] VERSION_ID="7"
[2026-03-14 01:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 01:42:01] ANSI_COLOR="0;31"
[2026-03-14 01:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 01:42:01] HOME_URL="https://www.centos.org/"
[2026-03-14 01:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 01:42:01] 
[2026-03-14 01:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 01:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 01:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 01:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 01:42:01] 
[2026-03-14 01:42:01] 2026-03-14 00:41:01,116 | INFO     | **************************************
[2026-03-14 01:42:01] 2026-03-14 00:41:01,619 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-03-14 01:42:01] 2026-03-14 00:41:01,637 | INFO     | sufficient remaining disk space (20358103040 B)
[2026-03-14 01:42:01] 2026-03-14 00:41:01,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 01:42:01] 2026-03-14 00:41:01,637 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 01:42:01] 2026-03-14 00:41:01,637 | INFO     | update_server=False
[2026-03-14 01:42:01] 2026-03-14 00:41:01,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 01:42:01] 2026-03-14 00:41:01,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 01:42:01] 2026-03-14 00:41:01,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:42:01] 2026-03-14 00:41:01,638 | INFO     | aborting loop
[2026-03-14 01:42:01] 2026-03-14 00:41:01,862 | INFO     | all data control threads have been joined
[2026-03-14 01:42:01] 2026-03-14 00:41:01,930 | INFO     | all payload control threads have been joined
[2026-03-14 01:42:01] 2026-03-14 00:41:02,644 | INFO     | [job] retrieve thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,644 | INFO     | [job] job monitor thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,680 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,731 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,768 | INFO     | [payload] validate_post thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,867 | INFO     | [data] control thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:02,935 | INFO     | [payload] control thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:03,012 | INFO     | all job control threads have been joined
[2026-03-14 01:42:01] 2026-03-14 00:41:03,039 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:03,143 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:03,487 | INFO     | [data] copytool_in thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:03,643 | INFO     | [data] copytool_out thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:03,660 | INFO     | [job] validate thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:04,017 | INFO     | [job] control thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:04,142 | INFO     | [payload] failed_post thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:04,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:42:01] 2026-03-14 00:41:04,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 01:42:01] 2026-03-14 00:41:05,281 | INFO     | [job] queue monitor thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:08,466 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 01:42:01] 2026-03-14 00:41:32,659 | INFO     | PID=123871 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 01:42:01] 2026-03-14 00:41:32,659 | INFO     | .. there are 13 such processes running
[2026-03-14 01:42:01] 2026-03-14 00:41:32,659 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 01:42:01] 2026-03-14 00:41:32,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 01:42:01] 2026-03-14 00:41:32,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 01:42:01] 2026-03-14 00:41:54,654 | INFO     | [monitor] cgroup control has ended
[2026-03-14 01:42:01] 2026-03-14 00:41:55,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22994284160832)>', '<ExcThread(monitor, started 22993969325824)>']
[2026-03-14 01:42:01] 2026-03-14 00:41:55,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 01:42:01] 2026-03-14 00:41:55,778 | INFO     | [monitor] control thread has ended
[2026-03-14 01:42:01] 2026-03-14 00:42:00,193 | INFO     | all workflow threads have been joined
[2026-03-14 01:42:01] 2026-03-14 00:42:00,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 01:42:01] 2026-03-14 00:42:00,194 | INFO     | traces error code: 0
[2026-03-14 01:42:01] 2026-03-14 00:42:00,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 01:42:01] 2026-03-14 00:42:00,335 [wrapper] ==== pilot stdout END ====
[2026-03-14 01:42:01] 2026-03-14 00:42:00,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 01:42:01] 2026-03-14 00:42:00,352 [wrapper] pilotpid: 123871
[2026-03-14 01:42:01] 2026-03-14 00:42:00,355 [wrapper] Pilot exit status: 0
[2026-03-14 01:42:01] 2026-03-14 00:42:00,390 [wrapper] pandaids: 7050112185
[2026-03-14 01:42:01] 2026-03-14 00:42:00,491 [wrapper] cleanup supervisor_pilot  397843 123872
[2026-03-14 01:42:01] 2026-03-14 00:42:00,503 [wrapper] Test setup, not cleaning
[2026-03-14 01:42:01] 2026-03-14 00:42:00,541 [wrapper] apfmon messages muted
[2026-03-14 01:42:01] 2026-03-14 00:42:00,578 [wrapper] ==== wrapper stdout END ====
[2026-03-14 01:42:01] 2026-03-14 00:42:00,586 [wrapper] ==== wrapper stderr END ====
[2026-03-14 01:42:01]  *** Error codes and diagnostics ***
[2026-03-14 01:42:01]     "exeErrorCode": 0,
[2026-03-14 01:42:01]     "exeErrorDiag": "",
[2026-03-14 01:42:01]     "pilotErrorCode": 0,
[2026-03-14 01:42:01]     "pilotErrorDiag": "",
[2026-03-14 01:42:01]  *** Listing of results directory ***
[2026-03-14 01:42:01] total 423448
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc      5111 Mar 11 20:56 queuedata.json
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc    585013 Mar 11 20:56 pilot3.tar.gz
[2026-03-14 01:42:01] -rwx------. 1 boinc boinc     36322 Mar 11 20:56 runpilot2-wrapper.sh
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc       100 Mar 13 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 01:42:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 21:38 run_atlas
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc       105 Mar 13 21:38 job.xml
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc 219089180 Mar 13 21:38 EVNT.48967008._000538.pool.root.1
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc      6563 Mar 13 21:38 init_data.xml
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc     15845 Mar 13 21:38 start_atlas.sh
[2026-03-14 01:42:01] drwxrwx--x. 2 boinc boinc      4096 Mar 13 21:38 shared
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc    597524 Mar 13 21:38 input.tar.gz
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc         0 Mar 13 21:38 boinc_lockfile
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc      2563 Mar 13 21:38 pandaJob.out
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc   1006721 Mar 13 21:38 agis_schedconf.cvmfs.json
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc       452 Mar 13 21:38 workernode_map.json
[2026-03-14 01:42:01] drwx------. 5 boinc boinc      4096 Mar 13 21:38 pilot3
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc 205682408 Mar 14 01:40 HITS.48967011._013688.pool.root.1
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc       529 Mar 14 01:40 boinc_task_state.xml
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc        95 Mar 14 01:40 pilot_heartbeat.json
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc      1047 Mar 14 01:40 memory_monitor_summary.json
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc   1511579 Mar 14 01:40 agis_ddmendpoints.agis.ALL.json
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc    416114 Mar 14 01:40 log.48967011._013688.job.log.tgz.1
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc      6402 Mar 14 01:40 heartbeat.json
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc        28 Mar 14 01:41 wrapper_checkpoint.txt
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc      8192 Mar 14 01:41 boinc_mmap_file
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc      4828 Mar 14 01:42 pilotlog.txt
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc   2034801 Mar 14 01:42 log.48967011._013688.job.log.1
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc       357 Mar 14 01:42 output.list
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc       620 Mar 14 01:42 runtime_log
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc   2467840 Mar 14 01:42 result.tar.gz
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc      9205 Mar 14 01:42 runtime_log.err
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc       665 Mar 14 01:42 5xPKDm3qeK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm50hLDmih4CFn.diag
[2026-03-14 01:42:01] -rw-r--r--. 1 boinc boinc     21129 Mar 14 01:42 stderr.txt
[2026-03-14 01:42:01] HITS file was successfully produced:
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc 205682408 Mar 14 01:40 shared/HITS.pool.root.1
[2026-03-14 01:42:01]  *** Contents of shared directory: ***
[2026-03-14 01:42:01] total 417840
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc 219089180 Mar 13 21:38 ATLAS.root_0
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc     15845 Mar 13 21:38 start_atlas.sh
[2026-03-14 01:42:01] -rw-r--r--. 2 boinc boinc    597524 Mar 13 21:38 input.tar.gz
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc 205682408 Mar 14 01:40 HITS.pool.root.1
[2026-03-14 01:42:01] -rw-------. 1 boinc boinc   2467840 Mar 14 01:42 result.tar.gz
01:42:02 (119758): run_atlas exited; CPU time 54829.601861
01:42:02 (119758): called boinc_finish(0)

</stderr_txt>
]]>

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