Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:01:45 (2448443): wrapper (7.7.26015): starting
20:01:45 (2448443): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 20:01:45] Arguments: --nthreads 8
[2026-03-11 20:01:45] Threads: 8
[2026-03-11 20:01:45] Checking for CVMFS
[2026-03-11 20:01:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 20:01:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 20:01:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 20:01:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 20:01:48] 2.13.3.0 10819 180509 361756 157176 1 293 27200937 32935936 23676 16776704 0 743344267 99.697 588315901 33095 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 20:01:48] CVMFS is ok
[2026-03-11 20:01:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 20:01:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 20:01:48] Further information can be found at the LHC@home message board.
[2026-03-11 20:01:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 20:01:48] Checking for apptainer binary...
[2026-03-11 20:01:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 20:01:48] Running /usr/bin/apptainer --version
[2026-03-11 20:01:50] apptainer version 1.4.5-2.el9
[2026-03-11 20:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 20:01:51] c-8-37.aglt2.org
[2026-03-11 20:01:51] apptainer works
[2026-03-11 20:01:52] Set ATHENA_PROC_NUMBER=8
[2026-03-11 20:01:52] Set ATHENA_CORE_NUMBER=8
[2026-03-11 20:01:52] Starting ATLAS job with PandaID=7050112147
[2026-03-11 20:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 06:51:32]  *** The last 200 lines of the pilot log: ***
[2026-03-12 06:51:32] 2026-03-12 10:50:48,112 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,112 | INFO     | log transfer has been attempted: DONE
[2026-03-12 06:51:32] 2026-03-12 10:50:48,112 | INFO     | job 7050112147 has finished - writing final server update
[2026-03-12 06:51:32] 2026-03-12 10:50:48,123 | INFO     | total number of processed events: 400 (read)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,255 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7050112147/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,256 | INFO     | extracted standard info from prmon json
[2026-03-12 06:51:32] 2026-03-12 10:50:48,256 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 06:51:32] 2026-03-12 10:50:48,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 06:51:32] 2026-03-12 10:50:48,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 06:51:32] 2026-03-12 10:50:48,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 06:51:32] 2026-03-12 10:50:48,402 | INFO     | fitting pss+swap vs Time
[2026-03-12 06:51:32] 2026-03-12 10:50:48,403 | INFO     | sum of square deviations: 79777532767.21228
[2026-03-12 06:51:32] 2026-03-12 10:50:48,464 | INFO     | sum of deviations: 152992045251.59412
[2026-03-12 06:51:32] 2026-03-12 10:50:48,500 | INFO     | mean x: 1773293239.1933963
[2026-03-12 06:51:32] 2026-03-12 10:50:48,500 | INFO     | mean y: 2492834.8081761007
[2026-03-12 06:51:32] 2026-03-12 10:50:48,500 | INFO     | intersect: -3398210973.4515266
[2026-03-12 06:51:32] 2026-03-12 10:50:48,501 | INFO     | chi2: 3.923847661052542
[2026-03-12 06:51:32] 2026-03-12 10:50:48,502 | INFO     | sum of square deviations: 77910972251.18526
[2026-03-12 06:51:32] 2026-03-12 10:50:48,586 | INFO     | sum of deviations: 233251811184.8447
[2026-03-12 06:51:32] 2026-03-12 10:50:48,586 | INFO     | mean x: 1773293086.697306
[2026-03-12 06:51:32] 2026-03-12 10:50:48,586 | INFO     | mean y: 2499360.732171157
[2026-03-12 06:51:32] 2026-03-12 10:50:48,587 | INFO     | intersect: -5306429693.57594
[2026-03-12 06:51:32] 2026-03-12 10:50:48,588 | INFO     | chi2: 2.447137591014369
[2026-03-12 06:51:32] 2026-03-12 10:50:48,588 | INFO     | current chi2=2.447137591014369 (change=37.63423551570951 %)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,589 | INFO     | sum of square deviations: 76073720462.04005
[2026-03-12 06:51:32] 2026-03-12 10:50:48,761 | INFO     | sum of deviations: 228631173721.2377
[2026-03-12 06:51:32] 2026-03-12 10:50:48,761 | INFO     | mean x: 1773292934.1996806
[2026-03-12 06:51:32] 2026-03-12 10:50:48,761 | INFO     | mean y: 2498977.1900958465
[2026-03-12 06:51:32] 2026-03-12 10:50:48,761 | INFO     | intersect: -5326937291.145901
[2026-03-12 06:51:32] 2026-03-12 10:50:48,762 | INFO     | chi2: 2.4473441631426045
[2026-03-12 06:51:32] 2026-03-12 10:50:48,762 | INFO     | current chi2=2.4473441631426045 (change=-0.008441377754724286 %)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,763 | INFO     | right removable region: 625
[2026-03-12 06:51:32] 2026-03-12 10:50:48,763 | INFO     | sum of square deviations: 77910235237.35054
[2026-03-12 06:51:32] 2026-03-12 10:50:48,773 | INFO     | sum of deviations: -1079410001.3375244
[2026-03-12 06:51:32] 2026-03-12 10:50:48,774 | INFO     | mean x: 1773293391.719493
[2026-03-12 06:51:32] 2026-03-12 10:50:48,774 | INFO     | mean y: 2505399.320126783
[2026-03-12 06:51:32] 2026-03-12 10:50:48,774 | INFO     | intersect: 27073552.86884213
[2026-03-12 06:51:32] 2026-03-12 10:50:48,775 | INFO     | chi2: 1.606654175307849
[2026-03-12 06:51:32] 2026-03-12 10:50:48,775 | INFO     | current chi2=1.606654175307849 (change=59.05411437719077 %)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,776 | INFO     | sum of square deviations: 76072325711.60527
[2026-03-12 06:51:32] 2026-03-12 10:50:48,786 | INFO     | sum of deviations: -16544747532.97123
[2026-03-12 06:51:32] 2026-03-12 10:50:48,786 | INFO     | mean x: 1773293544.2444088
[2026-03-12 06:51:32] 2026-03-12 10:50:48,787 | INFO     | mean y: 2506677.2939297124
[2026-03-12 06:51:32] 2026-03-12 10:50:48,787 | INFO     | intersect: 388175101.6115486
[2026-03-12 06:51:32] 2026-03-12 10:50:48,788 | INFO     | chi2: 1.5696547988719889
[2026-03-12 06:51:32] 2026-03-12 10:50:48,788 | INFO     | current chi2=1.5696547988719889 (change=2.3028836575095966 %)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,788 | INFO     | left removable region: 20
[2026-03-12 06:51:32] 2026-03-12 10:50:48,789 | INFO     | sum of square deviations: 68670151565.59333
[2026-03-12 06:51:32] 2026-03-12 10:50:48,798 | INFO     | sum of deviations: 72370490506.73555
[2026-03-12 06:51:32] 2026-03-12 10:50:48,798 | INFO     | mean x: 1773293513.8033059
[2026-03-12 06:51:32] 2026-03-12 10:50:48,798 | INFO     | mean y: 2512005.132231405
[2026-03-12 06:51:32] 2026-03-12 10:50:48,798 | INFO     | intersect: -1866336664.6391444
[2026-03-12 06:51:32] 2026-03-12 10:50:48,799 | INFO     | chi2: 0.009230383380224742
[2026-03-12 06:51:32] 2026-03-12 10:50:48,800 | INFO     | current memory leak: 1.05 B/s (using 605 data points, chi2=0.01)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,800 | INFO     | could have reported an average CPU frequency of 2599 MHz (25 samples)
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | ..............................
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . Timing measurements:
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . get job = 0 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . initial setup = 30 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . payload setup = 42 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . stage-in = 1 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . payload execution = 38775 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,801 | INFO     | . stage-out = 10 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,802 | INFO     | . log creation = 1 s
[2026-03-12 06:51:32] 2026-03-12 10:50:48,802 | INFO     | ..............................
[2026-03-12 06:51:32] 2026-03-12 10:50:49,039 | INFO     | 
[2026-03-12 06:51:32] 2026-03-12 10:50:49,039 | INFO     | job summary report
[2026-03-12 06:51:32] 2026-03-12 10:50:49,039 | INFO     | --------------------------------------------------
[2026-03-12 06:51:32] 2026-03-12 10:50:49,039 | INFO     | PanDA job id: 7050112147
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | task id: 48967011
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | errors: (none)
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | pilot state: finished 
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | transexitcode: 0
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | exeerrorcode: 0
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | exeerrordiag: 
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | exitcode: 0
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | exitmsg: OK
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | cpuconsumptiontime: 60649 s
[2026-03-12 06:51:32] 2026-03-12 10:50:49,040 | INFO     | nevents: 400
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | neventsw: 0
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | pid: 2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | pgrp: 2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | corecount: 8
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | event service: False
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | sizes: {0: 2279152, 1: 2279837, 2: 2279837, 4: 2280238, 5: 2280238, 6: 2280510, 18: 2280510, 38824: 2321202, 38826: 2321201, 38837: 2330283, 38840: 2330339, 38843:
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | --------------------------------------------------
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | 
[2026-03-12 06:51:32] 2026-03-12 10:50:49,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 06:51:32] 2026-03-12 10:50:49,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 06:51:32] 2026-03-12 10:50:49,272 | INFO     | job 7050112147 has completed (purged errors)
[2026-03-12 06:51:32] 2026-03-12 10:50:49,273 | INFO     | overall cleanup function is called
[2026-03-12 06:51:32] 2026-03-12 10:50:50,301 | INFO     | --- collectZombieJob: --- 10, [2468864]
[2026-03-12 06:51:32] 2026-03-12 10:50:50,301 | INFO     | zombie collector waiting for pid 2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:50,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 06:51:32] 2026-03-12 10:50:50,307 | INFO     | collected zombie processes
[2026-03-12 06:51:32] 2026-03-12 10:50:50,307 | INFO     | will attempt to kill all subprocesses of pid=2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:52,343 | INFO     | process IDs to be killed: [2468864] (in reverse order)
[2026-03-12 06:51:32] 2026-03-12 10:50:52,716 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 06:51:32] 2026-03-12 10:50:52,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 06:51:32] 2026-03-12 10:50:52,738 | INFO     | did not find any defunct processes belonging to 2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:52,799 | INFO     | did not find any defunct processes belonging to 2468864
[2026-03-12 06:51:32] 2026-03-12 10:50:52,800 | INFO     | ready for new job
[2026-03-12 06:51:32] 2026-03-12 10:50:52,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 06:51:32] 2026-03-12 10:50:52,845 | INFO     | **************************************
[2026-03-12 06:51:32] 2026-03-12 10:50:52,845 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 06:51:32] 2026-03-12 10:50:52,846 | INFO     | **************************************
[2026-03-12 06:51:32] 2026-03-12 10:50:52,846 | INFO     | 
[2026-03-12 06:51:32] 2026-03-12 10:50:52,847 | INFO     | architecture information:
[2026-03-12 06:51:32] 2026-03-12 10:50:52,889 | INFO     | executing command: cat /etc/os-release
[2026-03-12 06:51:32] 2026-03-12 10:50:53,107 | INFO     | cat /etc/os-release:
[2026-03-12 06:51:32] NAME="CentOS Linux"
[2026-03-12 06:51:32] VERSION="7 (Core)"
[2026-03-12 06:51:32] ID="centos"
[2026-03-12 06:51:32] ID_LIKE="rhel fedora"
[2026-03-12 06:51:32] VERSION_ID="7"
[2026-03-12 06:51:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 06:51:32] ANSI_COLOR="0;31"
[2026-03-12 06:51:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 06:51:32] HOME_URL="https://www.centos.org/"
[2026-03-12 06:51:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 06:51:32] 
[2026-03-12 06:51:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 06:51:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 06:51:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 06:51:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 06:51:32] 
[2026-03-12 06:51:32] 2026-03-12 10:50:53,107 | INFO     | **************************************
[2026-03-12 06:51:32] 2026-03-12 10:50:53,611 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 06:51:32] 2026-03-12 10:50:53,799 | INFO     | sufficient remaining disk space (75057070080 B)
[2026-03-12 06:51:32] 2026-03-12 10:50:53,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 06:51:32] 2026-03-12 10:50:53,808 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 06:51:32] 2026-03-12 10:50:53,808 | INFO     | update_server=False
[2026-03-12 06:51:32] 2026-03-12 10:50:53,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 06:51:32] 2026-03-12 10:50:53,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:51:32] 2026-03-12 10:50:53,809 | INFO     | aborting loop
[2026-03-12 06:51:32] 2026-03-12 10:50:53,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 06:51:32] 2026-03-12 10:50:54,032 | INFO     | all job control threads have been joined
[2026-03-12 06:51:32] 2026-03-12 10:50:54,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 06:51:32] 2026-03-12 10:50:54,184 | INFO     | all data control threads have been joined
[2026-03-12 06:51:32] 2026-03-12 10:50:54,504 | INFO     | all payload control threads have been joined
[2026-03-12 06:51:32] 2026-03-12 10:50:54,823 | INFO     | [job] retrieve thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,823 | INFO     | [job] job monitor thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,904 | INFO     | [job] validate thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,905 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,905 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,948 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:54,991 | INFO     | [payload] validate_post thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,038 | INFO     | [job] control thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,132 | INFO     | [job] queue monitor thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,199 | INFO     | [data] control thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,510 | INFO     | [payload] control thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,533 | INFO     | [data] copytool_in thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,867 | INFO     | [payload] failed_post thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:55,937 | INFO     | [data] copytool_out thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:50:56,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 06:51:32] 2026-03-12 10:51:00,905 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 06:51:32] 2026-03-12 10:51:26,088 | INFO     | [monitor] cgroup control has ended
[2026-03-12 06:51:32] 2026-03-12 10:51:26,109 | INFO     | PID=2459789 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 06:51:32] 2026-03-12 10:51:26,109 | INFO     | .. there are 44 such processes running
[2026-03-12 06:51:32] 2026-03-12 10:51:26,149 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 06:51:32] 2026-03-12 10:51:26,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 06:51:32] 2026-03-12 10:51:26,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 06:51:32] 2026-03-12 10:51:26,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364193101632)>', '<ExcThread(monitor, started 140363482261248)>']
[2026-03-12 06:51:32] 2026-03-12 10:51:27,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 06:51:32] 2026-03-12 10:51:27,155 | INFO     | [monitor] control thread has ended
[2026-03-12 06:51:32] 2026-03-12 10:51:31,201 | INFO     | all workflow threads have been joined
[2026-03-12 06:51:32] 2026-03-12 10:51:31,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 06:51:32] 2026-03-12 10:51:31,201 | INFO     | traces error code: 0
[2026-03-12 06:51:32] 2026-03-12 10:51:31,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 06:51:32] 2026-03-12 10:51:31,549 [wrapper] ==== pilot stdout END ====
[2026-03-12 06:51:32] 2026-03-12 10:51:31,596 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 06:51:32] 2026-03-12 10:51:31,639 [wrapper] pilotpid: 2459789
[2026-03-12 06:51:32] 2026-03-12 10:51:31,682 [wrapper] Pilot exit status: 0
[2026-03-12 06:51:32] 2026-03-12 10:51:31,780 [wrapper] pandaids: 7050112147
[2026-03-12 06:51:32] 2026-03-12 10:51:32,055 [wrapper] cleanup supervisor_pilot  198028 2459790
[2026-03-12 06:51:32] 2026-03-12 10:51:32,063 [wrapper] Test setup, not cleaning
[2026-03-12 06:51:32] 2026-03-12 10:51:32,068 [wrapper] apfmon messages muted
[2026-03-12 06:51:32] 2026-03-12 10:51:32,076 [wrapper] ==== wrapper stdout END ====
[2026-03-12 06:51:32] 2026-03-12 10:51:32,080 [wrapper] ==== wrapper stderr END ====
[2026-03-12 06:51:32]  *** Error codes and diagnostics ***
[2026-03-12 06:51:32]     "exeErrorCode": 0,
[2026-03-12 06:51:32]     "exeErrorDiag": "",
[2026-03-12 06:51:32]     "pilotErrorCode": 0,
[2026-03-12 06:51:32]     "pilotErrorDiag": "",
[2026-03-12 06:51:32]  *** Listing of results directory ***
[2026-03-12 06:51:32] total 429436
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 15:56 queuedata.json
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 15:56 pilot3.tar.gz
[2026-03-12 06:51:32] -rwx------. 1 boincer umatlas     36322 Mar 11 15:56 runpilot2-wrapper.sh
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas       100 Mar 11 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 06:51:32] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 20:01 run_atlas
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas       105 Mar 11 20:01 job.xml
[2026-03-12 06:51:32] -rw-r--r--. 2 boincer umatlas 218940561 Mar 11 20:01 EVNT.48967008._000537.pool.root.1
[2026-03-12 06:51:32] -rw-r--r--. 2 boincer umatlas    597525 Mar 11 20:01 input.tar.gz
[2026-03-12 06:51:32] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 20:01 start_atlas.sh
[2026-03-12 06:51:32] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 20:01 shared
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas         0 Mar 11 20:01 boinc_lockfile
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas      2563 Mar 11 20:01 pandaJob.out
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas        57 Mar 11 20:01 setup.sh.local
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas   1006235 Mar 11 20:02 agis_schedconf.cvmfs.json
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas       440 Mar 11 20:03 workernode_map.json
[2026-03-12 06:51:32] drwx------. 5 boincer umatlas      4096 Mar 11 20:03 pilot3
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas      6660 Mar 12 06:40 init_data.xml
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas 207225811 Mar 12 06:48 HITS.48967011._013650.pool.root.1
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas       530 Mar 12 06:48 boinc_task_state.xml
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas      1041 Mar 12 06:50 memory_monitor_summary.json
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas   1511578 Mar 12 06:50 agis_ddmendpoints.agis.ALL.json
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas    721275 Mar 12 06:50 log.48967011._013650.job.log.tgz.1
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas      6387 Mar 12 06:50 heartbeat.json
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas        95 Mar 12 06:51 pilot_heartbeat.json
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas        28 Mar 12 06:51 wrapper_checkpoint.txt
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 06:51 boinc_mmap_file
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas      4820 Mar 12 06:51 pilotlog.txt
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas   4097119 Mar 12 06:51 log.48967011._013650.job.log.1
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas       357 Mar 12 06:51 output.list
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas       620 Mar 12 06:51 runtime_log
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas   4833280 Mar 12 06:51 result.tar.gz
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas      9332 Mar 12 06:51 runtime_log.err
[2026-03-12 06:51:32] -rw-------. 1 boincer umatlas       656 Mar 12 06:51 EaKODmrqeK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvokLDmDYh3Ho.diag
[2026-03-12 06:51:32] -rw-r--r--. 1 boincer umatlas     21202 Mar 12 06:51 stderr.txt
[2026-03-12 06:51:33] HITS file was successfully produced:
[2026-03-12 06:51:33] -rw-------. 1 boincer umatlas 207225811 Mar 12 06:48 shared/HITS.pool.root.1
[2026-03-12 06:51:33]  *** Contents of shared directory: ***
[2026-03-12 06:51:33] total 421508
[2026-03-12 06:51:33] -rw-r--r--. 2 boincer umatlas 218940561 Mar 11 20:01 ATLAS.root_0
[2026-03-12 06:51:33] -rw-r--r--. 2 boincer umatlas    597525 Mar 11 20:01 input.tar.gz
[2026-03-12 06:51:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 20:01 start_atlas.sh
[2026-03-12 06:51:33] -rw-------. 1 boincer umatlas 207225811 Mar 12 06:48 HITS.pool.root.1
[2026-03-12 06:51:33] -rw-------. 1 boincer umatlas   4833280 Mar 12 06:51 result.tar.gz
06:51:34 (2448443): run_atlas exited; CPU time 62264.041067
06:51:34 (2448443): called boinc_finish(0)

</stderr_txt>
]]>

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