Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:57 (4061830): wrapper (7.7.26015): starting
18:33:57 (4061830): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 18:33:57] Arguments: --nthreads 4
[2026-03-13 18:33:57] Threads: 4
[2026-03-13 18:33:57] Checking for CVMFS
[2026-03-13 18:33:57] No cvmfs_config command found, will try listing directly
[2026-03-13 18:33:57] CVMFS is ok
[2026-03-13 18:33:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 18:33:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 18:33:57] Further information can be found at the LHC@home message board.
[2026-03-13 18:33:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 18:33:57] Checking for apptainer binary...
[2026-03-13 18:33:57] which: no apptainer in ((null))
[2026-03-13 18:33:57] apptainer is not installed, using version from CVMFS
[2026-03-13 18:33:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 18:33:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-13 18:33:57] apptainer works
[2026-03-13 18:33:57] Set ATHENA_PROC_NUMBER=4
[2026-03-13 18:33:57] Set ATHENA_CORE_NUMBER=4
[2026-03-13 18:33:57] Starting ATLAS job with PandaID=7050076073
[2026-03-13 18:33:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 20:19:27]  *** The last 200 lines of the pilot log: ***
[2026-03-13 20:19:27] 2026-03-13 19:18:30,710 | INFO     | total number of processed events: 400 (read)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7050076073/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | INFO     | extracted standard info from prmon json
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 20:19:27] 2026-03-13 19:18:30,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | fitting pss+swap vs Time
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | sum of square deviations: 338804492.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | sum of deviations: 2222623754.999999
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | mean x: 1773426381.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | mean y: 2287604.4077669904
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | intersect: -11631736427.818699
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | chi2: 1.8986629625171685
[2026-03-13 20:19:27] 2026-03-13 19:18:30,730 | INFO     | sum of square deviations: 291817564.5
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | sum of deviations: 8273031883.499997
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | mean x: 1773426228.5
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | mean y: 2306431.5204081633
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | intersect: -50274351029.29412
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | chi2: 1.1085056836390368
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | current chi2=1.1085056836390368 (change=41.61651090673692 %)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | sum of square deviations: 249388862.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | sum of deviations: 7856789386.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | mean x: 1773426076.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | mean y: 2304934.11827957
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | intersect: -55868013648.002
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | chi2: 1.1107385991920695
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | current chi2=1.1107385991920695 (change=-0.20143474102022177 %)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,731 | INFO     | right removable region: 92
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | sum of square deviations: 291817564.5
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | sum of deviations: -7030450934.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | mean x: 1773426533.5
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | mean y: 2316630.163265306
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | intersect: 42727600319.60841
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | chi2: 0.8243689799557579
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | current chi2=0.8243689799557579 (change=56.58160525431835 %)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | sum of square deviations: 249388862.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | sum of deviations: -6699367212.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | mean x: 1773426686.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | mean y: 2315418.924731183
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | intersect: 47642119770.228195
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | chi2: 0.8254366810241319
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | current chi2=0.8254366810241319 (change=-0.12951737563334345 %)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,732 | INFO     | left removable region: 20
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | sum of square deviations: 115715658.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | sum of deviations: -476813149.0
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | mean x: 1773426655.5
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | mean y: 2336725.972222222
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | intersect: 7309845171.626942
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | chi2: 0.0007879023745214805
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | current memory leak: -4.12 B/s (using 72 data points, chi2=0.00)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | could have reported an average CPU frequency of 3578 MHz (7 samples)
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | ..............................
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . Timing measurements:
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . get job = 0 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . initial setup = 5 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . payload setup = 4 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . stage-in = 0 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . payload execution = 6238 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . stage-out = 0 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | . log creation = 0 s
[2026-03-13 20:19:27] 2026-03-13 19:18:30,733 | INFO     | ..............................
[2026-03-13 20:19:27] 2026-03-13 19:18:31,109 | INFO     | 
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | job summary report
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | --------------------------------------------------
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | PanDA job id: 7050076073
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | task id: 48967094
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | errors: (none)
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | pilot state: finished 
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | transexitcode: 0
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | exeerrorcode: 0
[2026-03-13 20:19:27] 2026-03-13 19:18:31,113 | INFO     | exeerrordiag: 
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | exitcode: 0
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | exitmsg: OK
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | cpuconsumptiontime: 24026 s
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | nevents: 400
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | neventsw: 0
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | pid: 4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | pgrp: 4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | corecount: 4
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | event service: False
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | sizes: {0: 2280236, 11: 2280236, 6247: 2307136, 6248: 2316214, 6249: 2316352}
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | --------------------------------------------------
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | 
[2026-03-13 20:19:27] 2026-03-13 19:18:31,114 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-13 20:19:27] 2026-03-13 19:18:31,130 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | job 7050076073 has completed (purged errors)
[2026-03-13 20:19:27] 2026-03-13 19:18:31,131 | INFO     | overall cleanup function is called
[2026-03-13 20:19:27] 2026-03-13 19:18:32,138 | INFO     | --- collectZombieJob: --- 10, [4072344]
[2026-03-13 20:19:27] 2026-03-13 19:18:32,138 | INFO     | zombie collector waiting for pid 4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:32,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 20:19:27] 2026-03-13 19:18:32,138 | INFO     | collected zombie processes
[2026-03-13 20:19:27] 2026-03-13 19:18:32,138 | INFO     | will attempt to kill all subprocesses of pid=4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:32,615 | INFO     | process IDs to be killed: [4072344] (in reverse order)
[2026-03-13 20:19:27] 2026-03-13 19:18:32,867 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 20:19:27] 2026-03-13 19:18:32,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 20:19:27] 2026-03-13 19:18:32,898 | INFO     | did not find any defunct processes belonging to 4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:32,928 | INFO     | did not find any defunct processes belonging to 4072344
[2026-03-13 20:19:27] 2026-03-13 19:18:32,929 | INFO     | ready for new job
[2026-03-13 20:19:27] 2026-03-13 19:18:32,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 20:19:27] 2026-03-13 19:18:32,930 | INFO     | **************************************
[2026-03-13 20:19:27] 2026-03-13 19:18:32,930 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 20:19:27] 2026-03-13 19:18:32,930 | INFO     | **************************************
[2026-03-13 20:19:27] 2026-03-13 19:18:32,930 | INFO     | 
[2026-03-13 20:19:27] 2026-03-13 19:18:32,936 | INFO     | architecture information:
[2026-03-13 20:19:27] 2026-03-13 19:18:32,936 | INFO     | executing command: cat /etc/os-release
[2026-03-13 20:19:27] 2026-03-13 19:18:32,948 | INFO     | cat /etc/os-release:
[2026-03-13 20:19:27] NAME="CentOS Linux"
[2026-03-13 20:19:27] VERSION="7 (Core)"
[2026-03-13 20:19:27] ID="centos"
[2026-03-13 20:19:27] ID_LIKE="rhel fedora"
[2026-03-13 20:19:27] VERSION_ID="7"
[2026-03-13 20:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 20:19:27] ANSI_COLOR="0;31"
[2026-03-13 20:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 20:19:27] HOME_URL="https://www.centos.org/"
[2026-03-13 20:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 20:19:27] 
[2026-03-13 20:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 20:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 20:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 20:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 20:19:27] 
[2026-03-13 20:19:27] 2026-03-13 19:18:32,948 | INFO     | **************************************
[2026-03-13 20:19:27] 2026-03-13 19:18:33,450 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-13 20:19:27] 2026-03-13 19:18:33,463 | INFO     | sufficient remaining disk space (20196622336 B)
[2026-03-13 20:19:27] 2026-03-13 19:18:33,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 20:19:27] 2026-03-13 19:18:33,464 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 20:19:27] 2026-03-13 19:18:33,464 | INFO     | update_server=False
[2026-03-13 20:19:27] 2026-03-13 19:18:33,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 20:19:27] 2026-03-13 19:18:33,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 20:19:27] 2026-03-13 19:18:33,795 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 20:19:27] 2026-03-13 19:18:33,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:19:27] 2026-03-13 19:18:33,795 | INFO     | will abort loop
[2026-03-13 20:19:27] 2026-03-13 19:18:33,937 | INFO     | all payload control threads have been joined
[2026-03-13 20:19:27] 2026-03-13 19:18:33,983 | INFO     | all data control threads have been joined
[2026-03-13 20:19:27] 2026-03-13 19:18:34,468 | INFO     | [job] retrieve thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:34,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 20:19:27] 2026-03-13 19:18:34,697 | INFO     | all job control threads have been joined
[2026-03-13 20:19:27] 2026-03-13 19:18:34,799 | INFO     | [job] job monitor thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:34,942 | INFO     | [payload] control thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:34,987 | INFO     | [data] control thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,087 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 20:19:27] 2026-03-13 19:18:35,108 | INFO     | [job] validate thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,198 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,199 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,210 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,602 | INFO     | [payload] failed_post thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,620 | INFO     | [data] copytool_in thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,651 | INFO     | [payload] validate_post thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,653 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,702 | INFO     | [job] control thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:35,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 20:19:27] 2026-03-13 19:18:36,552 | INFO     | [data] copytool_out thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:36,798 | INFO     | [job] queue monitor thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:18:39,092 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 20:19:27] 2026-03-13 19:19:02,985 | INFO     | PID=4066418 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 20:19:27] 2026-03-13 19:19:02,985 | INFO     | .. there are 47 such processes running
[2026-03-13 20:19:27] 2026-03-13 19:19:02,986 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 20:19:27] 2026-03-13 19:19:02,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 20:19:27] 2026-03-13 19:19:02,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 20:19:27] 2026-03-13 19:19:04,379 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-13 20:19:27] 2026-03-13 19:19:20,064 | INFO     | [monitor] cgroup control has ended
[2026-03-13 20:19:27] 2026-03-13 19:19:21,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23234637068096)>', '<ExcThread(monitor, started 23234400765696)>']
[2026-03-13 20:19:27] 2026-03-13 19:19:22,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 20:19:27] 2026-03-13 19:19:22,084 | INFO     | [monitor] control thread has ended
[2026-03-13 20:19:27] 2026-03-13 19:19:26,732 | INFO     | all workflow threads have been joined
[2026-03-13 20:19:27] 2026-03-13 19:19:26,733 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 20:19:27] 2026-03-13 19:19:26,733 | INFO     | traces error code: 0
[2026-03-13 20:19:27] 2026-03-13 19:19:26,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 20:19:27] 2026-03-13 19:19:26,977 [wrapper] ==== pilot stdout END ====
[2026-03-13 20:19:27] 2026-03-13 19:19:26,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 20:19:27] 2026-03-13 19:19:26,990 [wrapper] pilotpid: 4066418
[2026-03-13 20:19:27] 2026-03-13 19:19:26,992 [wrapper] Pilot exit status: 0
[2026-03-13 20:19:27] 2026-03-13 19:19:27,031 [wrapper] pandaids: 7050076073
[2026-03-13 20:19:27] 2026-03-13 19:19:27,195 [wrapper] cleanup supervisor_pilot  741725 4066419
[2026-03-13 20:19:27] 2026-03-13 19:19:27,199 [wrapper] Test setup, not cleaning
[2026-03-13 20:19:27] 2026-03-13 19:19:27,202 [wrapper] apfmon messages muted
[2026-03-13 20:19:27] 2026-03-13 19:19:27,209 [wrapper] ==== wrapper stdout END ====
[2026-03-13 20:19:27] 2026-03-13 19:19:27,215 [wrapper] ==== wrapper stderr END ====
[2026-03-13 20:19:27]  *** Error codes and diagnostics ***
[2026-03-13 20:19:27]     "exeErrorCode": 0,
[2026-03-13 20:19:27]     "exeErrorDiag": "",
[2026-03-13 20:19:27]     "pilotErrorCode": 0,
[2026-03-13 20:19:27]     "pilotErrorDiag": "",
[2026-03-13 20:19:27]  *** Listing of results directory ***
[2026-03-13 20:19:27] total 422168
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc    585013 Mar 11 20:14 pilot3.tar.gz
[2026-03-13 20:19:27] -rwx------. 1 boinc boinc     36322 Mar 11 20:17 runpilot2-wrapper.sh
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc      5111 Mar 11 20:17 queuedata.json
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc       100 Mar 13 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 20:19:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 18:33 run_atlas
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc       105 Mar 13 18:33 job.xml
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc      6708 Mar 13 18:33 init_data.xml
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc 217260180 Mar 13 18:33 EVNT.48967092._000154.pool.root.1
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:33 start_atlas.sh
[2026-03-13 20:19:27] drwxrwx--x. 2 boinc boinc      4096 Mar 13 18:33 shared
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc    597536 Mar 13 18:33 input.tar.gz
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc         0 Mar 13 18:33 boinc_lockfile
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc      2597 Mar 13 18:33 pandaJob.out
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc   1006589 Mar 13 18:34 agis_schedconf.cvmfs.json
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc   1511579 Mar 13 18:34 agis_ddmendpoints.agis.ALL.json
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc       445 Mar 13 18:34 workernode_map.json
[2026-03-13 20:19:27] drwx------. 5 boinc boinc      4096 Mar 13 18:34 pilot3
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc 208693118 Mar 13 20:18 HITS.48967094._003398.pool.root.1
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc       530 Mar 13 20:18 boinc_task_state.xml
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc      1033 Mar 13 20:18 memory_monitor_summary.json
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc    300508 Mar 13 20:18 log.48967094._003398.job.log.tgz.1
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc      6355 Mar 13 20:18 heartbeat.json
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc        95 Mar 13 20:19 pilot_heartbeat.json
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc      8192 Mar 13 20:19 boinc_mmap_file
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc        27 Mar 13 20:19 wrapper_checkpoint.txt
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc      5016 Mar 13 20:19 pilotlog.txt
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc    902296 Mar 13 20:19 log.48967094._003398.job.log.1
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc       357 Mar 13 20:19 output.list
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc       620 Mar 13 20:19 runtime_log
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc   1218560 Mar 13 20:19 result.tar.gz
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc      9221 Mar 13 20:19 runtime_log.err
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc       663 Mar 13 20:19 YLqNDmaEeK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuzhLDmtS8Rtn.diag
[2026-03-13 20:19:27] -rw-r--r--. 1 boinc boinc     20787 Mar 13 20:19 stderr.txt
[2026-03-13 20:19:27] HITS file was successfully produced:
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc 208693118 Mar 13 20:18 shared/HITS.pool.root.1
[2026-03-13 20:19:27]  *** Contents of shared directory: ***
[2026-03-13 20:19:27] total 417776
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc 217260180 Mar 13 18:33 ATLAS.root_0
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar 13 18:33 start_atlas.sh
[2026-03-13 20:19:27] -rw-r--r--. 2 boinc boinc    597536 Mar 13 18:33 input.tar.gz
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc 208693118 Mar 13 20:18 HITS.pool.root.1
[2026-03-13 20:19:27] -rw-------. 1 boinc boinc   1218560 Mar 13 20:19 result.tar.gz
20:19:28 (4061830): run_atlas exited; CPU time 24287.529777
20:19:28 (4061830): called boinc_finish(0)

</stderr_txt>
]]>

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