Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:30 (1097564): wrapper (7.7.26015): starting
00:13:30 (1097564): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:13:30] Arguments: --nthreads 8
[2026-03-12 00:13:30] Threads: 8
[2026-03-12 00:13:30] Checking for CVMFS
[2026-03-12 00:13:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:13:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:13:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:13:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:13:35] 2.13.3.0 589311 105685 218940 157181 2 566 30911455 39288832 13052 16776704 0 90737650 99.670 151505614 35889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-12 00:13:35] CVMFS is ok
[2026-03-12 00:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:13:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:13:35] Further information can be found at the LHC@home message board.
[2026-03-12 00:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:13:35] Checking for apptainer binary...
[2026-03-12 00:13:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:13:35] Running /usr/bin/apptainer --version
[2026-03-12 00:13:35] apptainer version 1.4.5-2.el9
[2026-03-12 00:13:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:13:38] c-210-23.aglt2.org
[2026-03-12 00:13:38] apptainer works
[2026-03-12 00:13:38] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:13:38] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:13:38] Starting ATLAS job with PandaID=7050406922
[2026-03-12 00:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 18:01:59]  *** The last 200 lines of the pilot log: ***
[2026-03-12 18:01:59] 2026-03-12 12:52:58,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 18:01:59] 2026-03-12 12:52:58,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 18:01:59] 2026-03-12 12:52:58,949 | INFO     | fitting pss+swap vs Time
[2026-03-12 18:01:59] 2026-03-12 12:52:58,950 | INFO     | sum of square deviations: 39935550589.80224
[2026-03-12 18:01:59] 2026-03-12 12:52:59,045 | INFO     | sum of deviations: -1112276731.683529
[2026-03-12 18:01:59] 2026-03-12 12:52:59,046 | INFO     | mean x: 1773304543.019802
[2026-03-12 18:01:59] 2026-03-12 12:52:59,046 | INFO     | mean y: 2417670.3683168315
[2026-03-12 18:01:59] 2026-03-12 12:52:59,046 | INFO     | intersect: 51807383.34984472
[2026-03-12 18:01:59] 2026-03-12 12:52:59,047 | INFO     | chi2: 14.210576086345014
[2026-03-12 18:01:59] 2026-03-12 12:52:59,047 | INFO     | sum of square deviations: 38761784208.82152
[2026-03-12 18:01:59] 2026-03-12 12:52:59,282 | INFO     | sum of deviations: 152500101888.31802
[2026-03-12 18:01:59] 2026-03-12 12:52:59,282 | INFO     | mean x: 1773304390.566
[2026-03-12 18:01:59] 2026-03-12 12:52:59,282 | INFO     | mean y: 2437622.854
[2026-03-12 18:01:59] 2026-03-12 12:52:59,283 | INFO     | intersect: -6974256194.526359
[2026-03-12 18:01:59] 2026-03-12 12:52:59,283 | INFO     | chi2: 10.636401169843028
[2026-03-12 18:01:59] 2026-03-12 12:52:59,283 | INFO     | current chi2=10.636401169843028 (change=25.151513174307 %)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,284 | INFO     | sum of square deviations: 37611243586.8889
[2026-03-12 18:01:59] 2026-03-12 12:52:59,451 | INFO     | time since job start (30975s) is within the limit (345600.0s)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,454 | INFO     | sum of deviations: 310165681312.2222
[2026-03-12 18:01:59] 2026-03-12 12:52:59,455 | INFO     | mean x: 1773304238.1111112
[2026-03-12 18:01:59] 2026-03-12 12:52:59,455 | INFO     | mean y: 2458519.414141414
[2026-03-12 18:01:59] 2026-03-12 12:52:59,455 | INFO     | intersect: -14621309926.76714
[2026-03-12 18:01:59] 2026-03-12 12:52:59,456 | INFO     | chi2: 7.064835175748562
[2026-03-12 18:01:59] 2026-03-12 12:52:59,456 | INFO     | current chi2=7.064835175748562 (change=33.57870709334269 %)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,456 | INFO     | sum of square deviations: 36483303446.40007
[2026-03-12 18:01:59] 2026-03-12 12:52:59,701 | INFO     | sum of deviations: 306089407418.2857
[2026-03-12 18:01:59] 2026-03-12 12:52:59,701 | INFO     | mean x: 1773304085.6285715
[2026-03-12 18:01:59] 2026-03-12 12:52:59,702 | INFO     | mean y: 2457968.336734694
[2026-03-12 18:01:59] 2026-03-12 12:52:59,702 | INFO     | intersect: -14875295564.588839
[2026-03-12 18:01:59] 2026-03-12 12:52:59,702 | INFO     | chi2: 7.068069201141455
[2026-03-12 18:01:59] 2026-03-12 12:52:59,703 | INFO     | current chi2=7.068069201141455 (change=-0.04577637428817179 %)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,703 | INFO     | right removable region: 489
[2026-03-12 18:01:59] 2026-03-12 12:52:59,703 | INFO     | sum of square deviations: 38760330022.68792
[2026-03-12 18:01:59] 2026-03-12 12:52:59,793 | INFO     | sum of deviations: -161745531004.1121
[2026-03-12 18:01:59] 2026-03-12 12:52:59,793 | INFO     | mean x: 1773304695.568
[2026-03-12 18:01:59] 2026-03-12 12:52:59,793 | INFO     | mean y: 2438507.518
[2026-03-12 18:01:59] 2026-03-12 12:52:59,793 | INFO     | intersect: 7402378328.691923
[2026-03-12 18:01:59] 2026-03-12 12:52:59,794 | INFO     | chi2: 10.321017991626835
[2026-03-12 18:01:59] 2026-03-12 12:52:59,798 | INFO     | current chi2=10.321017991626835 (change=27.37086850726388 %)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,799 | INFO     | sum of square deviations: 37608487984.10937
[2026-03-12 18:01:59] 2026-03-12 12:52:59,832 | INFO     | sum of deviations: -273439816494.10907
[2026-03-12 18:01:59] 2026-03-12 12:52:59,858 | INFO     | mean x: 1773304848.1090908
[2026-03-12 18:01:59] 2026-03-12 12:52:59,858 | INFO     | mean y: 2453293.7797979796
[2026-03-12 18:01:59] 2026-03-12 12:52:59,858 | INFO     | intersect: 12895610616.667765
[2026-03-12 18:01:59] 2026-03-12 12:52:59,859 | INFO     | chi2: 8.487913692222165
[2026-03-12 18:01:59] 2026-03-12 12:52:59,860 | INFO     | current chi2=8.487913692222165 (change=17.760886580101097 %)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,860 | INFO     | left removable region: 20
[2026-03-12 18:01:59] 2026-03-12 12:52:59,861 | INFO     | sum of square deviations: 31988602228.73799
[2026-03-12 18:01:59] 2026-03-12 12:52:59,899 | INFO     | sum of deviations: -51045161429.53525
[2026-03-12 18:01:59] 2026-03-12 12:52:59,900 | INFO     | mean x: 1773304665.3240938
[2026-03-12 18:01:59] 2026-03-12 12:52:59,900 | INFO     | mean y: 2508082.7995735607
[2026-03-12 18:01:59] 2026-03-12 12:52:59,900 | INFO     | intersect: 2832222937.420387
[2026-03-12 18:01:59] 2026-03-12 12:52:59,901 | INFO     | chi2: 0.35442928376637506
[2026-03-12 18:01:59] 2026-03-12 12:52:59,901 | INFO     | current memory leak: -1.60 B/s (using 469 data points, chi2=0.35)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,910 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | ..............................
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . Timing measurements:
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . get job = 2 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . initial setup = 77 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . payload setup = 76 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . stage-in = 1 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . payload execution = 30850 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,911 | INFO     | . stage-out = 9 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,912 | INFO     | . log creation = 1 s
[2026-03-12 18:01:59] 2026-03-12 12:52:59,912 | INFO     | ..............................
[2026-03-12 18:01:59] 2026-03-12 12:53:00,772 | INFO     | 
[2026-03-12 18:01:59] 2026-03-12 12:53:00,772 | INFO     | job summary report
[2026-03-12 18:01:59] 2026-03-12 12:53:00,772 | INFO     | --------------------------------------------------
[2026-03-12 18:01:59] 2026-03-12 12:53:00,772 | INFO     | PanDA job id: 7050406922
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | task id: 48967102
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | errors: (none)
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | pilot state: finished 
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | transexitcode: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | exeerrorcode: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | exeerrordiag: 
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | exitcode: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | exitmsg: OK
[2026-03-12 18:01:59] 2026-03-12 12:53:00,773 | INFO     | cpuconsumptiontime: 60271 s
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | nevents: 400
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | neventsw: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | pid: 1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | pgrp: 1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | corecount: 8
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | event service: False
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | sizes: {0: 2279759, 1: 2279815, 3: 2279871, 6: 2279871, 8: 2280304, 10: 2280332, 22: 2280488, 30933: 2318561, 30934: 2318560, 30945: 2327614, 30949: 2327670, 30952
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | --------------------------------------------------
[2026-03-12 18:01:59] 2026-03-12 12:53:00,774 | INFO     | 
[2026-03-12 18:01:59] 2026-03-12 12:53:00,775 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-12 18:01:59] 2026-03-12 12:53:00,939 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,942 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 18:01:59] 2026-03-12 12:53:00,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,942 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 18:01:59] 2026-03-12 12:53:00,942 | INFO     | job 7050406922 has completed (purged errors)
[2026-03-12 18:01:59] 2026-03-12 12:53:00,942 | INFO     | overall cleanup function is called
[2026-03-12 18:01:59] 2026-03-12 12:53:01,975 | INFO     | --- collectZombieJob: --- 10, [1111637]
[2026-03-12 18:01:59] 2026-03-12 12:53:01,975 | INFO     | zombie collector waiting for pid 1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:01,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 18:01:59] 2026-03-12 12:53:01,976 | INFO     | collected zombie processes
[2026-03-12 18:01:59] 2026-03-12 12:53:01,976 | INFO     | will attempt to kill all subprocesses of pid=1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:05,861 | INFO     | process IDs to be killed: [1111637] (in reverse order)
[2026-03-12 18:01:59] 2026-03-12 12:53:06,803 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 18:01:59] 2026-03-12 12:53:06,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 18:01:59] 2026-03-12 12:53:06,919 | INFO     | did not find any defunct processes belonging to 1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:06,963 | INFO     | did not find any defunct processes belonging to 1111637
[2026-03-12 18:01:59] 2026-03-12 12:53:06,963 | INFO     | ready for new job
[2026-03-12 18:01:59] 2026-03-12 12:53:06,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 18:01:59] 2026-03-12 12:53:06,966 | INFO     | **************************************
[2026-03-12 18:01:59] 2026-03-12 12:53:06,966 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 18:01:59] 2026-03-12 12:53:06,967 | INFO     | **************************************
[2026-03-12 18:01:59] 2026-03-12 12:53:06,967 | INFO     | 
[2026-03-12 18:01:59] 2026-03-12 12:53:06,969 | INFO     | architecture information:
[2026-03-12 18:01:59] 2026-03-12 12:53:06,969 | INFO     | executing command: cat /etc/os-release
[2026-03-12 18:01:59] 2026-03-12 12:53:07,055 | INFO     | cat /etc/os-release:
[2026-03-12 18:01:59] NAME="CentOS Linux"
[2026-03-12 18:01:59] VERSION="7 (Core)"
[2026-03-12 18:01:59] ID="centos"
[2026-03-12 18:01:59] ID_LIKE="rhel fedora"
[2026-03-12 18:01:59] VERSION_ID="7"
[2026-03-12 18:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 18:01:59] ANSI_COLOR="0;31"
[2026-03-12 18:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 18:01:59] HOME_URL="https://www.centos.org/"
[2026-03-12 18:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 18:01:59] 
[2026-03-12 18:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 18:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 18:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 18:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 18:01:59] 
[2026-03-12 18:01:59] 2026-03-12 12:53:07,056 | INFO     | **************************************
[2026-03-12 18:01:59] 2026-03-12 12:53:07,593 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-12 18:01:59] 2026-03-12 12:53:07,764 | INFO     | sufficient remaining disk space (51371835392 B)
[2026-03-12 18:01:59] 2026-03-12 12:53:07,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 18:01:59] 2026-03-12 12:53:07,765 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 18:01:59] 2026-03-12 12:53:07,765 | INFO     | update_server=False
[2026-03-12 18:01:59] 2026-03-12 12:53:07,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 18:01:59] 2026-03-12 12:53:07,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 18:01:59] 2026-03-12 12:53:07,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:01:59] 2026-03-12 12:53:07,766 | INFO     | aborting loop
[2026-03-12 18:01:59] 2026-03-12 12:53:08,051 | INFO     | all data control threads have been joined
[2026-03-12 18:01:59] 2026-03-12 12:53:08,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 18:01:59] 2026-03-12 12:53:08,771 | INFO     | [job] retrieve thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:08,796 | INFO     | [job] job monitor thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:08,935 | INFO     | all payload control threads have been joined
[2026-03-12 18:01:59] 2026-03-12 12:53:09,000 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,024 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,076 | INFO     | [data] control thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,141 | INFO     | all job control threads have been joined
[2026-03-12 18:01:59] 2026-03-12 12:53:09,773 | INFO     | [data] copytool_out thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,827 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,875 | INFO     | [payload] validate_post thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:09,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 18:01:59] 2026-03-12 12:53:09,943 | INFO     | [payload] control thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,147 | INFO     | [job] control thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,184 | INFO     | [payload] failed_post thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,229 | INFO     | [data] copytool_in thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,237 | INFO     | [job] validate thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,246 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:10,949 | INFO     | [job] queue monitor thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:12,190 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 18:01:59] 2026-03-12 12:53:35,803 | INFO     | PID=1102683 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 18:01:59] 2026-03-12 12:53:35,804 | INFO     | .. there are 16 such processes running
[2026-03-12 18:01:59] 2026-03-12 12:53:35,804 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 18:01:59] 2026-03-12 12:53:35,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 18:01:59] 2026-03-12 12:53:35,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 18:01:59] 2026-03-12 12:53:42,562 | INFO     | [monitor] cgroup control has ended
[2026-03-12 18:01:59] 2026-03-12 12:53:43,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013047723840)>', '<ExcThread(monitor, started 140012494509824)>']
[2026-03-12 18:01:59] 2026-03-12 12:53:43,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 18:01:59] 2026-03-12 12:53:43,856 | INFO     | [monitor] control thread has ended
[2026-03-12 18:01:59] 2026-03-12 12:53:48,274 | INFO     | all workflow threads have been joined
[2026-03-12 18:01:59] 2026-03-12 12:53:48,274 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 18:01:59] 2026-03-12 12:53:48,300 | INFO     | traces error code: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:48,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 18:01:59] 2026-03-12 12:53:48,643 [wrapper] ==== pilot stdout END ====
[2026-03-12 18:01:59] 2026-03-12 12:53:48,697 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 18:01:59] 2026-03-12 12:53:48,746 [wrapper] pilotpid: 1102683
[2026-03-12 18:01:59] 2026-03-12 12:53:48,798 [wrapper] Pilot exit status: 0
[2026-03-12 18:01:59] 2026-03-12 12:53:49,268 [wrapper] pandaids: 7050406922
[2026-03-12 18:01:59] 2026-03-12 12:53:49,647 [wrapper] cleanup supervisor_pilot 2021191 1102684
[2026-03-12 18:01:59] 2026-03-12 12:53:49,685 [wrapper] Test setup, not cleaning
[2026-03-12 18:01:59] 2026-03-12 12:53:49,730 [wrapper] apfmon messages muted
[2026-03-12 18:01:59] 2026-03-12 12:53:49,788 [wrapper] ==== wrapper stdout END ====
[2026-03-12 18:01:59] 2026-03-12 12:53:49,941 [wrapper] ==== wrapper stderr END ====
[2026-03-12 18:01:59]  *** Error codes and diagnostics ***
[2026-03-12 18:01:59]     "exeErrorCode": 0,
[2026-03-12 18:01:59]     "exeErrorDiag": "",
[2026-03-12 18:01:59]     "pilotErrorCode": 0,
[2026-03-12 18:01:59]     "pilotErrorDiag": "",
[2026-03-12 18:01:59]  *** Listing of results directory ***
[2026-03-12 18:01:59] total 418744
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 19:24 pilot3.tar.gz
[2026-03-12 18:01:59] -rwx------. 1 boincer umatlas     36322 Mar 11 19:28 runpilot2-wrapper.sh
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 19:29 queuedata.json
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas       100 Mar 12 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 18:01:59] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 12 00:13 run_atlas
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas       105 Mar 12 00:13 job.xml
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas 214523685 Mar 12 00:13 EVNT.48967100._000038.pool.root.1
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:13 start_atlas.sh
[2026-03-12 18:01:59] drwxrwx--x. 2 boincer umatlas      4096 Mar 12 00:13 shared
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas    597522 Mar 12 00:13 input.tar.gz
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas         0 Mar 12 00:13 boinc_lockfile
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas      2574 Mar 12 00:13 pandaJob.out
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas        57 Mar 12 00:13 setup.sh.local
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas       442 Mar 12 00:16 workernode_map.json
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas   1006227 Mar 12 00:16 agis_schedconf.cvmfs.json
[2026-03-12 18:01:59] drwx------. 5 boincer umatlas      4096 Mar 12 00:16 pilot3
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas 201772991 Mar 12 08:42 HITS.48967102._000936.pool.root.1
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas       529 Mar 12 08:43 boinc_task_state.xml
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas      1043 Mar 12 08:52 memory_monitor_summary.json
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas   1511578 Mar 12 08:52 agis_ddmendpoints.agis.ALL.json
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas    644207 Mar 12 08:52 log.48967102._000936.job.log.tgz.1
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas        95 Mar 12 08:52 pilot_heartbeat.json
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas      6392 Mar 12 08:52 heartbeat.json
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas      4820 Mar 12 08:53 pilotlog.txt
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas   3636102 Mar 12 08:53 log.48967102._000936.job.log.1
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas       357 Mar 12 08:53 output.list
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas       620 Mar 12 08:53 runtime_log
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas   4300800 Mar 12 08:53 result.tar.gz
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas       658 Mar 12 08:53 TgqLDm89hK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcbiLDmqeLdKo.diag
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas      9342 Mar 12 08:53 runtime_log.err
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas        26 Mar 12 18:01 wrapper_checkpoint.txt
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas      6659 Mar 12 18:01 init_data.xml
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 18:01 boinc_mmap_file
[2026-03-12 18:01:59] -rw-r--r--. 1 boincer umatlas     20982 Mar 12 18:01 stderr.txt
[2026-03-12 18:01:59] HITS file was successfully produced:
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas 201772991 Mar 12 08:42 shared/HITS.pool.root.1
[2026-03-12 18:01:59]  *** Contents of shared directory: ***
[2026-03-12 18:01:59] total 411344
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas 214523685 Mar 12 00:13 ATLAS.root_0
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 12 00:13 start_atlas.sh
[2026-03-12 18:01:59] -rw-r--r--. 2 boincer umatlas    597522 Mar 12 00:13 input.tar.gz
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas 201772991 Mar 12 08:42 HITS.pool.root.1
[2026-03-12 18:01:59] -rw-------. 1 boincer umatlas   4300800 Mar 12 08:53 result.tar.gz
18:02:01 (1097564): run_atlas exited; CPU time 61133.285009
18:02:01 (1097564): called boinc_finish(0)

</stderr_txt>
]]>

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