Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:03:35 (3242103): wrapper (7.7.26015): starting
02:03:35 (3242103): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 02:03:35] Arguments: --nthreads 3
[2026-03-13 02:03:35] Threads: 3
[2026-03-13 02:03:35] Checking for CVMFS
[2026-03-13 02:03:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 02:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 02:03:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 02:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 02:03:36] 2.9.2.0 64072 22038 89252 157221 3 50 29229941 36864000 0 130560 0 8498219 99.981 831786 10132 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 02:03:36] CVMFS is ok
[2026-03-13 02:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 02:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 02:03:36] Further information can be found at the LHC@home message board.
[2026-03-13 02:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 02:03:36] Checking for apptainer binary...
[2026-03-13 02:03:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 02:03:36] Running /usr/bin/apptainer --version
[2026-03-13 02:03:36] apptainer version 1.4.1-1.1
[2026-03-13 02:03:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 02:03:36] thA383
[2026-03-13 02:03:36] apptainer works
[2026-03-13 02:03:36] Set ATHENA_PROC_NUMBER=3
[2026-03-13 02:03:36] Set ATHENA_CORE_NUMBER=3
[2026-03-13 02:03:36] Starting ATLAS job with PandaID=7036711972
[2026-03-13 02:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 03:41:19]  *** The last 200 lines of the pilot log: ***
[2026-03-13 03:41:19] 2026-03-13 02:40:49,334 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 03:41:19] 2026-03-13 02:40:49,334 | INFO     | **************************************
[2026-03-13 03:41:19] 2026-03-13 02:40:49,334 | INFO     | 
[2026-03-13 03:41:19] 2026-03-13 02:40:49,334 | INFO     | architecture information:
[2026-03-13 03:41:19] 2026-03-13 02:40:49,334 | INFO     | executing command: cat /etc/os-release
[2026-03-13 03:41:19] 2026-03-13 02:40:49,344 | INFO     | cat /etc/os-release:
[2026-03-13 03:41:19] NAME="CentOS Linux"
[2026-03-13 03:41:19] VERSION="7 (Core)"
[2026-03-13 03:41:19] ID="centos"
[2026-03-13 03:41:19] ID_LIKE="rhel fedora"
[2026-03-13 03:41:19] VERSION_ID="7"
[2026-03-13 03:41:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 03:41:19] ANSI_COLOR="0;31"
[2026-03-13 03:41:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 03:41:19] HOME_URL="https://www.centos.org/"
[2026-03-13 03:41:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 03:41:19] 
[2026-03-13 03:41:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 03:41:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 03:41:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 03:41:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 03:41:19] 
[2026-03-13 03:41:19] 2026-03-13 02:40:49,344 | INFO     | **************************************
[2026-03-13 03:41:19] 2026-03-13 02:40:49,615 | WARNING  | process 3250571 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 03:41:19] 2026-03-13 02:40:49,651 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 03:41:19] 2026-03-13 02:40:49,697 | INFO     | number of running child processes to parent process 3250571: 1
[2026-03-13 03:41:19] 2026-03-13 02:40:49,697 | INFO     | maximum number of monitored processes: 6
[2026-03-13 03:41:19] 2026-03-13 02:40:49,697 | INFO     | aborting job monitoring since job object (job id=7036711972) has expired
[2026-03-13 03:41:19] 2026-03-13 02:40:49,847 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | INFO     | sufficient remaining disk space (227603906560 B)
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | INFO     | update_server=False
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 03:41:19] 2026-03-13 02:40:49,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 03:41:19] 2026-03-13 02:40:49,863 | INFO     | will abort loop
[2026-03-13 03:41:19] 2026-03-13 02:40:50,566 | INFO     | all job control threads have been joined
[2026-03-13 03:41:19] 2026-03-13 02:40:50,807 | INFO     | all data control threads have been joined
[2026-03-13 03:41:19] 2026-03-13 02:40:50,868 | INFO     | [job] retrieve thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:50,868 | INFO     | [job] queue monitor thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:50,868 | INFO     | [job] job monitor thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:50,937 | INFO     | all payload control threads have been joined
[2026-03-13 03:41:19] 2026-03-13 02:40:51,251 | INFO     | [job] validate thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,418 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,421 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,461 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,513 | INFO     | [data] copytool_in thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,571 | INFO     | [job] control thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,808 | INFO     | [data] control thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,868 | INFO     | [data] copytool_out thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,943 | INFO     | [payload] control thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:51,944 | INFO     | [payload] validate_post thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:52,119 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:52,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 03:41:19] 2026-03-13 02:40:52,285 | INFO     | [payload] failed_post thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:54,744 | INFO     | [monitor] cgroup control has ended
[2026-03-13 03:41:19] 2026-03-13 02:40:56,245 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 03:41:19] 2026-03-13 02:40:58,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077245241152)>', '<ExcThread(monitor, started 140076893841152)>']
[2026-03-13 03:41:19] 2026-03-13 02:41:03,090 | INFO     | all workflow threads have been joined
[2026-03-13 03:41:19] 2026-03-13 02:41:03,090 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 03:41:19] 2026-03-13 02:41:03,091 | INFO     | traces error code: 0
[2026-03-13 03:41:19] 2026-03-13 02:41:03,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | INFO     | PID=3246143 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 03:41:19] 2026-03-13 02:41:19,605 | INFO     | [monitor] control thread has ended
[2026-03-13 03:41:19] 2026-03-13 02:41:19,654 [wrapper] ==== pilot stdout END ====
[2026-03-13 03:41:19] 2026-03-13 02:41:19,656 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 03:41:19] 2026-03-13 02:41:19,659 [wrapper] pilotpid: 3246143
[2026-03-13 03:41:19] 2026-03-13 02:41:19,661 [wrapper] Pilot exit status: 0
[2026-03-13 03:41:19] 2026-03-13 02:41:19,668 [wrapper] pandaids: 7036711972
[2026-03-13 03:41:19] 2026-03-13 02:41:19,686 [wrapper] cleanup supervisor_pilot 3257278 3246144
[2026-03-13 03:41:19] 2026-03-13 02:41:19,689 [wrapper] Test setup, not cleaning
[2026-03-13 03:41:19] 2026-03-13 02:41:19,691 [wrapper] apfmon messages muted
[2026-03-13 03:41:19] 2026-03-13 02:41:19,693 [wrapper] ==== wrapper stdout END ====
[2026-03-13 03:41:19] 2026-03-13 02:41:19,696 [wrapper] ==== wrapper stderr END ====
[2026-03-13 03:41:19]  *** Error codes and diagnostics ***
[2026-03-13 03:41:19]     "exeErrorCode": 0,
[2026-03-13 03:41:19]     "exeErrorDiag": "",
[2026-03-13 03:41:19]     "pilotErrorCode": 0,
[2026-03-13 03:41:19]     "pilotErrorDiag": "",
[2026-03-13 03:41:19]  *** Listing of results directory ***
[2026-03-13 03:41:19] total 506536
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc    584627 Mar  3 22:23 pilot3.tar.gz
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      5111 Mar  3 23:06 queuedata.json
[2026-03-13 03:41:19] -rwx------ 1 boinc boinc     36322 Mar  3 23:06 runpilot2-wrapper.sh
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc       100 Mar 13 02:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 03:41:19] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 02:03 run_atlas
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc       105 Mar 13 02:03 job.xml
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc 291121774 Mar 13 02:03 EVNT.48220197._000198.pool.root.1
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc    597976 Mar 13 02:03 input.tar.gz
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc     15845 Mar 13 02:03 start_atlas.sh
[2026-03-13 03:41:19] drwxrwx--x 2 boinc boinc      4096 Mar 13 02:03 shared
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc         0 Mar 13 02:03 boinc_setup_complete
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      6438 Mar 13 02:03 init_data.xml
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc         0 Mar 13 02:03 boinc_lockfile
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      2567 Mar 13 02:03 pandaJob.out
[2026-03-13 03:41:19] -rw------- 1 boinc boinc   1006522 Mar 13 02:03 agis_schedconf.cvmfs.json
[2026-03-13 03:41:19] -rw------- 1 boinc boinc   1511578 Mar 13 02:03 agis_ddmendpoints.agis.ALL.json
[2026-03-13 03:41:19] -rw------- 1 boinc boinc       427 Mar 13 02:03 workernode_map.json
[2026-03-13 03:41:19] drwx------ 5 boinc boinc      4096 Mar 13 02:03 pilot3
[2026-03-13 03:41:19] -rw------- 1 boinc boinc 221400315 Mar 13 03:40 HITS.48838577._005042.pool.root.1
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc       530 Mar 13 03:40 boinc_task_state.xml
[2026-03-13 03:41:19] -rw------- 1 boinc boinc      1022 Mar 13 03:40 memory_monitor_summary.json
[2026-03-13 03:41:19] -rw------- 1 boinc boinc    282360 Mar 13 03:40 log.48838577._005042.job.log.tgz.1
[2026-03-13 03:41:19] -rw------- 1 boinc boinc      6308 Mar 13 03:40 heartbeat.json
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      8192 Mar 13 03:41 boinc_mmap_file
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc        27 Mar 13 03:41 wrapper_checkpoint.txt
[2026-03-13 03:41:19] -rw------- 1 boinc boinc       747 Mar 13 03:41 pilotlog.txt
[2026-03-13 03:41:19] -rw------- 1 boinc boinc        95 Mar 13 03:41 pilot_heartbeat.json
[2026-03-13 03:41:19] -rw------- 1 boinc boinc    844337 Mar 13 03:41 log.48838577._005042.job.log.1
[2026-03-13 03:41:19] -rw------- 1 boinc boinc       357 Mar 13 03:41 output.list
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc       620 Mar 13 03:41 runtime_log
[2026-03-13 03:41:19] -rw------- 1 boinc boinc   1146880 Mar 13 03:41 result.tar.gz
[2026-03-13 03:41:19] -rw------- 1 boinc boinc       657 Mar 13 03:41 v6KNDm13mH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSwHLDm6TnnKm.diag
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      8896 Mar 13 03:41 runtime_log.err
[2026-03-13 03:41:19] -rw-r--r-- 1 boinc boinc      9859 Mar 13 03:41 stderr.txt
[2026-03-13 03:41:19] HITS file was successfully produced:
[2026-03-13 03:41:19] -rw------- 1 boinc boinc 221400315 Mar 13 03:40 shared/HITS.pool.root.1
[2026-03-13 03:41:19]  *** Contents of shared directory: ***
[2026-03-13 03:41:19] total 502236
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc 291121774 Mar 13 02:03 ATLAS.root_0
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc    597976 Mar 13 02:03 input.tar.gz
[2026-03-13 03:41:19] -rw-r--r-- 2 boinc boinc     15845 Mar 13 02:03 start_atlas.sh
[2026-03-13 03:41:19] -rw------- 1 boinc boinc 221400315 Mar 13 03:40 HITS.pool.root.1
[2026-03-13 03:41:19] -rw------- 1 boinc boinc   1146880 Mar 13 03:41 result.tar.gz
03:41:21 (3242103): run_atlas exited; CPU time 16781.554959
03:41:21 (3242103): called boinc_finish(0)

</stderr_txt>
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