Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:08:34 (4040372): wrapper (7.7.26015): starting
02:08:34 (4040372): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 02:08:34] Arguments: --nthreads 4
[2026-03-14 02:08:34] Threads: 4
[2026-03-14 02:08:34] Checking for CVMFS
[2026-03-14 02:08:34] No cvmfs_config command found, will try listing directly
[2026-03-14 02:08:34] CVMFS is ok
[2026-03-14 02:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 02:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 02:08:34] Further information can be found at the LHC@home message board.
[2026-03-14 02:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 02:08:34] Checking for apptainer binary...
[2026-03-14 02:08:34] which: no apptainer in ((null))
[2026-03-14 02:08:34] apptainer is not installed, using version from CVMFS
[2026-03-14 02:08:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 02:08:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot244/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-14 02:08:34] apptainer works
[2026-03-14 02:08:34] Set ATHENA_PROC_NUMBER=4
[2026-03-14 02:08:34] Set ATHENA_CORE_NUMBER=4
[2026-03-14 02:08:34] Starting ATLAS job with PandaID=7036700763
[2026-03-14 02:08:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot244/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 03:52:02]  *** The last 200 lines of the pilot log: ***
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | mean y: 2294420.0495049506
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | intersect: -27075370207.810867
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | chi2: 1.9414738861939407
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | sum of square deviations: 274312120.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | sum of deviations: 10787771828.499998
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | mean x: 1773453445.5
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | mean y: 2313520.6770833335
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | intersect: -69741637707.29329
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | chi2: 1.118331218296159
[2026-03-14 03:52:02] 2026-03-14 02:51:08,427 | INFO     | current chi2=1.118331218296159 (change=42.397823311003584 %)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | sum of square deviations: 233641590.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | sum of deviations: 10155716150.000002
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | mean x: 1773453293.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | mean y: 2311148.4945054944
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | intersect: -77084513371.87785
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | chi2: 1.1202171492728106
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | current chi2=1.1202171492728106 (change=-0.16863796215266233 %)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | right removable region: 90
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | sum of square deviations: 274312120.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | sum of deviations: -4783720894.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | mean x: 1773453750.5
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | mean y: 2326021.4166666665
[2026-03-14 03:52:02] 2026-03-14 02:51:08,428 | INFO     | intersect: 30929533178.029045
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | chi2: 0.857662147213924
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | current chi2=0.857662147213924 (change=55.824172897051824 %)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | sum of square deviations: 233641590.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | sum of deviations: -4885126318.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | mean x: 1773453903.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | mean y: 2326394.076923077
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | intersect: 37082823643.32574
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | chi2: 0.858764996718427
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | current chi2=0.858764996718427 (change=-0.12858787205259878 %)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | left removable region: 20
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | sum of square deviations: 106336877.5
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | sum of deviations: 418634399.0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | mean x: 1773453872.5
[2026-03-14 03:52:02] 2026-03-14 02:51:08,429 | INFO     | mean y: 2351225.1142857145
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | intersect: -6979505055.819488
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | chi2: 5.896405571270406e-05
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | current memory leak: 3.94 B/s (using 70 data points, chi2=0.00)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | could have reported an average CPU frequency of 3587 MHz (7 samples)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | ..............................
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . Timing measurements:
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . get job = 0 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . initial setup = 4 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . payload setup = 5 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . stage-in = 0 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . payload execution = 6117 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . stage-out = 0 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | . log creation = 0 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,430 | INFO     | ..............................
[2026-03-14 03:52:02] 2026-03-14 02:51:08,479 | INFO     | 
[2026-03-14 03:52:02] 2026-03-14 02:51:08,479 | INFO     | job summary report
[2026-03-14 03:52:02] 2026-03-14 02:51:08,479 | INFO     | --------------------------------------------------
[2026-03-14 03:52:02] 2026-03-14 02:51:08,479 | INFO     | PanDA job id: 7036700763
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | task id: 48838577
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | errors: (none)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | pilot state: finished 
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | transexitcode: 0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | exeerrorcode: 0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | exeerrordiag: 
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | exitcode: 0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | exitmsg: OK
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | cpuconsumptiontime: 23526 s
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | nevents: 400
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | neventsw: 0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | pid: 4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | pgrp: 4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | corecount: 4
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | event service: False
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | sizes: {0: 2279819, 1: 2280280, 11: 2280280, 6126: 2307068, 6127: 2316090, 6130: 2316468}
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | --------------------------------------------------
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | 
[2026-03-14 03:52:02] 2026-03-14 02:51:08,480 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot244/slots/0
[2026-03-14 03:52:02] 2026-03-14 02:51:08,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 03:52:02] 2026-03-14 02:51:08,499 | INFO     | job 7036700763 has completed (purged errors)
[2026-03-14 03:52:02] 2026-03-14 02:51:08,500 | INFO     | overall cleanup function is called
[2026-03-14 03:52:02] 2026-03-14 02:51:09,506 | INFO     | --- collectZombieJob: --- 10, [4050868]
[2026-03-14 03:52:02] 2026-03-14 02:51:09,506 | INFO     | zombie collector waiting for pid 4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:09,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 03:52:02] 2026-03-14 02:51:09,506 | INFO     | collected zombie processes
[2026-03-14 03:52:02] 2026-03-14 02:51:09,506 | INFO     | will attempt to kill all subprocesses of pid=4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:09,634 | WARNING  | process 4050868 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 03:52:02] 2026-03-14 02:51:10,701 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:52:02] 2026-03-14 02:51:10,702 | INFO     | using path: /var/lib/boinc/var/slot244/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:52:02] 2026-03-14 02:51:10,702 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 03:52:02] 2026-03-14 02:51:10,702 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 03:52:02] 2026-03-14 02:51:10,703 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036700763/payload.stdout) since it has not been created yet
[2026-03-14 03:52:02] 2026-03-14 02:51:10,703 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-14 03:52:02] 2026-03-14 02:51:10,717 | INFO     | sufficient remaining disk space (20574109696 B)
[2026-03-14 03:52:02] 2026-03-14 02:51:10,718 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 03:52:02] 2026-03-14 02:51:10,718 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot244/slots/0/PanDA_Pilot-7036700763/HITS.48838577._004655.pool.root.1 since it does not exist
[2026-03-14 03:52:02] 2026-03-14 02:51:10,887 | INFO     | process IDs to be killed: [4050868] (in reverse order)
[2026-03-14 03:52:02] 2026-03-14 02:51:11,104 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 03:52:02] 2026-03-14 02:51:11,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 03:52:02] 2026-03-14 02:51:11,178 | INFO     | did not find any defunct processes belonging to 4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:11,253 | INFO     | did not find any defunct processes belonging to 4050868
[2026-03-14 03:52:02] 2026-03-14 02:51:11,254 | INFO     | ready for new job
[2026-03-14 03:52:02] 2026-03-14 02:51:11,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 03:52:02] 2026-03-14 02:51:11,255 | INFO     | **************************************
[2026-03-14 03:52:02] 2026-03-14 02:51:11,255 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 03:52:02] 2026-03-14 02:51:11,255 | INFO     | **************************************
[2026-03-14 03:52:02] 2026-03-14 02:51:11,255 | INFO     | 
[2026-03-14 03:52:02] 2026-03-14 02:51:11,261 | INFO     | architecture information:
[2026-03-14 03:52:02] 2026-03-14 02:51:11,261 | INFO     | executing command: cat /etc/os-release
[2026-03-14 03:52:02] 2026-03-14 02:51:11,273 | INFO     | cat /etc/os-release:
[2026-03-14 03:52:02] NAME="CentOS Linux"
[2026-03-14 03:52:02] VERSION="7 (Core)"
[2026-03-14 03:52:02] ID="centos"
[2026-03-14 03:52:02] ID_LIKE="rhel fedora"
[2026-03-14 03:52:02] VERSION_ID="7"
[2026-03-14 03:52:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 03:52:02] ANSI_COLOR="0;31"
[2026-03-14 03:52:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 03:52:02] HOME_URL="https://www.centos.org/"
[2026-03-14 03:52:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 03:52:02] 
[2026-03-14 03:52:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 03:52:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 03:52:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 03:52:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 03:52:02] 
[2026-03-14 03:52:02] 2026-03-14 02:51:11,273 | INFO     | **************************************
[2026-03-14 03:52:02] 2026-03-14 02:51:11,433 | INFO     | number of running child processes to parent process 4050868: 1
[2026-03-14 03:52:02] 2026-03-14 02:51:11,434 | INFO     | maximum number of monitored processes: 6
[2026-03-14 03:52:02] 2026-03-14 02:51:11,434 | INFO     | aborting job monitoring since job object (job id=7036700763) has expired
[2026-03-14 03:52:02] 2026-03-14 02:51:11,776 | INFO     | executing command: df -mP /var/lib/boinc/var/slot244/slots/0
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | INFO     | sufficient remaining disk space (20573061120 B)
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | INFO     | update_server=False
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 03:52:02] 2026-03-14 02:51:11,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:52:02] 2026-03-14 02:51:11,793 | INFO     | will abort loop
[2026-03-14 03:52:02] 2026-03-14 02:51:12,008 | INFO     | all data control threads have been joined
[2026-03-14 03:52:02] 2026-03-14 02:51:12,797 | INFO     | [job] job monitor thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:12,797 | INFO     | [job] retrieve thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:12,842 | INFO     | all payload control threads have been joined
[2026-03-14 03:52:02] 2026-03-14 02:51:12,889 | INFO     | [payload] failed_post thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:12,925 | INFO     | all job control threads have been joined
[2026-03-14 03:52:02] 2026-03-14 02:51:12,955 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,013 | INFO     | [data] control thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,109 | INFO     | [data] copytool_in thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 03:52:02] 2026-03-14 02:51:13,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:52:02] 2026-03-14 02:51:13,610 | INFO     | [payload] validate_post thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,847 | INFO     | [payload] control thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,930 | INFO     | [job] control thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:13,991 | INFO     | [job] validate thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:14,014 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:14,092 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:14,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 03:52:02] 2026-03-14 02:51:14,494 | INFO     | [job] queue monitor thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:15,228 | INFO     | [data] copytool_out thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:18,415 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:22,539 | INFO     | job.realtimelogging is not enabled
[2026-03-14 03:52:02] 2026-03-14 02:51:23,544 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 03:52:02] 2026-03-14 02:51:40,580 | INFO     | PID=4045023 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 03:52:02] 2026-03-14 02:51:40,583 | INFO     | .. there are 49 such processes running
[2026-03-14 03:52:02] 2026-03-14 02:51:40,584 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 03:52:02] 2026-03-14 02:51:40,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 03:52:02] 2026-03-14 02:51:40,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 03:52:02] 2026-03-14 02:51:57,341 | INFO     | [monitor] cgroup control has ended
[2026-03-14 03:52:02] 2026-03-14 02:51:57,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22849528661824)>', '<ExcThread(monitor, started 22849215506176)>']
[2026-03-14 03:52:02] 2026-03-14 02:51:57,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 03:52:02] 2026-03-14 02:51:57,659 | INFO     | [monitor] control thread has ended
[2026-03-14 03:52:02] 2026-03-14 02:52:02,633 | INFO     | all workflow threads have been joined
[2026-03-14 03:52:02] 2026-03-14 02:52:02,633 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 03:52:02] 2026-03-14 02:52:02,633 | INFO     | traces error code: 0
[2026-03-14 03:52:02] 2026-03-14 02:52:02,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 03:52:02] 2026-03-14 02:52:02,781 [wrapper] ==== pilot stdout END ====
[2026-03-14 03:52:02] 2026-03-14 02:52:02,784 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 03:52:02] 2026-03-14 02:52:02,787 [wrapper] pilotpid: 4045023
[2026-03-14 03:52:02] 2026-03-14 02:52:02,789 [wrapper] Pilot exit status: 0
[2026-03-14 03:52:02] 2026-03-14 02:52:02,796 [wrapper] pandaids: 7036700763
[2026-03-14 03:52:02] 2026-03-14 02:52:02,924 [wrapper] cleanup supervisor_pilot  591155 4045024
[2026-03-14 03:52:02] 2026-03-14 02:52:02,927 [wrapper] Test setup, not cleaning
[2026-03-14 03:52:02] 2026-03-14 02:52:02,929 [wrapper] apfmon messages muted
[2026-03-14 03:52:02] 2026-03-14 02:52:02,932 [wrapper] ==== wrapper stdout END ====
[2026-03-14 03:52:02] 2026-03-14 02:52:02,934 [wrapper] ==== wrapper stderr END ====
[2026-03-14 03:52:02]  *** Error codes and diagnostics ***
[2026-03-14 03:52:02]     "exeErrorCode": 0,
[2026-03-14 03:52:02]     "exeErrorDiag": "",
[2026-03-14 03:52:02]     "pilotErrorCode": 0,
[2026-03-14 03:52:02]     "pilotErrorDiag": "",
[2026-03-14 03:52:02]  *** Listing of results directory ***
[2026-03-14 03:52:02] total 511808
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc    584627 Mar  3 21:50 pilot3.tar.gz
[2026-03-14 03:52:02] -rwx------. 1 boinc boinc     36322 Mar  3 22:17 runpilot2-wrapper.sh
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc      5111 Mar  3 22:18 queuedata.json
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc       100 Mar 14 02:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 03:52:02] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 02:08 run_atlas
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc       105 Mar 14 02:08 job.xml
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc     15845 Mar 14 02:08 start_atlas.sh
[2026-03-14 03:52:02] drwxrwx--x. 2 boinc boinc      4096 Mar 14 02:08 shared
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc    597977 Mar 14 02:08 input.tar.gz
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc      6708 Mar 14 02:08 init_data.xml
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc 290840186 Mar 14 02:08 EVNT.48220197._000182.pool.root.1
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc         0 Mar 14 02:08 boinc_lockfile
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc      2567 Mar 14 02:08 pandaJob.out
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc   1006713 Mar 14 02:08 agis_schedconf.cvmfs.json
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc   1511579 Mar 14 02:08 agis_ddmendpoints.agis.ALL.json
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc       443 Mar 14 02:08 workernode_map.json
[2026-03-14 03:52:02] drwx------. 5 boinc boinc      4096 Mar 14 02:08 pilot3
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc 226973186 Mar 14 03:50 HITS.48838577._004655.pool.root.1
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc       529 Mar 14 03:50 boinc_task_state.xml
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc      1030 Mar 14 03:51 memory_monitor_summary.json
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc    285275 Mar 14 03:51 log.48838577._004655.job.log.tgz.1
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc      6351 Mar 14 03:51 heartbeat.json
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc        95 Mar 14 03:51 pilot_heartbeat.json
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc      8192 Mar 14 03:51 boinc_mmap_file
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc        27 Mar 14 03:51 wrapper_checkpoint.txt
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc      5192 Mar 14 03:52 pilotlog.txt
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc    886449 Mar 14 03:52 log.48838577._004655.job.log.1
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc       357 Mar 14 03:52 output.list
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc       620 Mar 14 03:52 runtime_log
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc   1187840 Mar 14 03:52 result.tar.gz
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc      9221 Mar 14 03:52 runtime_log.err
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc       663 Mar 14 03:52 JoyMDmjImH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKfFLDmaKViGn.diag
[2026-03-14 03:52:02] -rw-r--r--. 1 boinc boinc     21259 Mar 14 03:52 stderr.txt
[2026-03-14 03:52:02] HITS file was successfully produced:
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc 226973186 Mar 14 03:50 shared/HITS.pool.root.1
[2026-03-14 03:52:02]  *** Contents of shared directory: ***
[2026-03-14 03:52:02] total 507448
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc     15845 Mar 14 02:08 start_atlas.sh
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc    597977 Mar 14 02:08 input.tar.gz
[2026-03-14 03:52:02] -rw-r--r--. 2 boinc boinc 290840186 Mar 14 02:08 ATLAS.root_0
[2026-03-14 03:52:02] -rw-------. 1 boinc boinc 226973186 Mar 14 03:50 HITS.pool.root.1
[2026-03-14 03:52:03] -rw-------. 1 boinc boinc   1187840 Mar 14 03:52 result.tar.gz
03:52:04 (4040372): run_atlas exited; CPU time 23792.546587
03:52:04 (4040372): called boinc_finish(0)

</stderr_txt>
]]>

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