Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:30:35 (1368105): wrapper (7.7.26015): starting
19:30:35 (1368105): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 19:30:35] Arguments: --nthreads 8
[2026-03-11 19:30:35] Threads: 8
[2026-03-11 19:30:35] Checking for CVMFS
[2026-03-11 19:30:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 19:30:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 19:30:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 19:30:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 19:30:40] 2.13.3.0 9702 181914 349604 157176 2 269 32017445 32935936 28006 16776704 0 758926207 99.676 619466796 32450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 19:30:40] CVMFS is ok
[2026-03-11 19:30:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 19:30:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 19:30:40] Further information can be found at the LHC@home message board.
[2026-03-11 19:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 19:30:40] Checking for apptainer binary...
[2026-03-11 19:30:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 19:30:40] Running /usr/bin/apptainer --version
[2026-03-11 19:30:40] apptainer version 1.4.5-2.el9
[2026-03-11 19:30:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 19:30:41] c-4-37.aglt2.org
[2026-03-11 19:30:41] apptainer works
[2026-03-11 19:30:41] Set ATHENA_PROC_NUMBER=8
[2026-03-11 19:30:41] Set ATHENA_CORE_NUMBER=8
[2026-03-11 19:30:41] Starting ATLAS job with PandaID=7036700453
[2026-03-11 19:30:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 15:47:56]  *** The last 200 lines of the pilot log: ***
[2026-03-12 15:47:56] 2026-03-12 19:47:02,958 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 15:47:56] 2026-03-12 19:47:02,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 15:47:56] 2026-03-12 19:47:02,990 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 15:47:56] 2026-03-12 19:47:02,990 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 15:47:56] 2026-03-12 19:47:03,220 | INFO     | time since job start (72788s) is within the limit (349056.0s)
[2026-03-12 15:47:56] 2026-03-12 19:47:03,342 | INFO     | fitting pss+swap vs Time
[2026-03-12 15:47:56] 2026-03-12 19:47:03,344 | INFO     | sum of square deviations: 522533104052.11774
[2026-03-12 15:47:56] 2026-03-12 19:47:03,944 | INFO     | sum of deviations: 399801998024.05884
[2026-03-12 15:47:56] 2026-03-12 19:47:03,944 | INFO     | mean x: 1773308477.764706
[2026-03-12 15:47:56] 2026-03-12 19:47:03,944 | INFO     | mean y: 2523785.625210084
[2026-03-12 15:47:56] 2026-03-12 19:47:03,944 | INFO     | intersect: -1354274983.7262883
[2026-03-12 15:47:56] 2026-03-12 19:47:03,979 | INFO     | chi2: 7.933399187065144
[2026-03-12 15:47:56] 2026-03-12 19:47:03,981 | INFO     | sum of square deviations: 515974637642.0454
[2026-03-12 15:47:56] 2026-03-12 19:47:04,456 | INFO     | sum of deviations: 788059081495.2627
[2026-03-12 15:47:56] 2026-03-12 19:47:04,456 | INFO     | mean x: 1773308325.2708862
[2026-03-12 15:47:56] 2026-03-12 19:47:04,456 | INFO     | mean y: 2532813.787341772
[2026-03-12 15:47:56] 2026-03-12 19:47:04,456 | INFO     | intersect: -2705878856.226496
[2026-03-12 15:47:56] 2026-03-12 19:47:04,511 | INFO     | chi2: 4.318454236585241
[2026-03-12 15:47:56] 2026-03-12 19:47:04,511 | INFO     | current chi2=4.318454236585241 (change=45.56615474957846 %)
[2026-03-12 15:47:56] 2026-03-12 19:47:04,513 | INFO     | sum of square deviations: 509470927617.1323
[2026-03-12 15:47:56] 2026-03-12 19:47:04,928 | INFO     | sum of deviations: 783041732516.7023
[2026-03-12 15:47:56] 2026-03-12 19:47:04,928 | INFO     | mean x: 1773308172.7728813
[2026-03-12 15:47:56] 2026-03-12 19:47:04,928 | INFO     | mean y: 2532696.140677966
[2026-03-12 15:47:56] 2026-03-12 19:47:04,928 | INFO     | intersect: -2722989465.425367
[2026-03-12 15:47:56] 2026-03-12 19:47:04,930 | INFO     | chi2: 4.318632277075724
[2026-03-12 15:47:56] 2026-03-12 19:47:04,930 | INFO     | current chi2=4.318632277075724 (change=-0.004122782846108405 %)
[2026-03-12 15:47:56] 2026-03-12 19:47:04,930 | INFO     | right removable region: 1179
[2026-03-12 15:47:56] 2026-03-12 19:47:04,974 | INFO     | sum of square deviations: 515973357003.4126
[2026-03-12 15:47:56] 2026-03-12 19:47:05,034 | INFO     | sum of deviations: 43139563363.20009
[2026-03-12 15:47:56] 2026-03-12 19:47:05,034 | INFO     | mean x: 1773308630.2734177
[2026-03-12 15:47:56] 2026-03-12 19:47:05,034 | INFO     | mean y: 2532074.533333333
[2026-03-12 15:47:56] 2026-03-12 19:47:05,034 | INFO     | intersect: -145730929.70873204
[2026-03-12 15:47:56] 2026-03-12 19:47:05,036 | INFO     | chi2: 4.802485777260228
[2026-03-12 15:47:56] 2026-03-12 19:47:05,036 | INFO     | current chi2=4.802485777260228 (change=39.464967487198344 %)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,037 | INFO     | sum of square deviations: 509469306175.48694
[2026-03-12 15:47:56] 2026-03-12 19:47:05,071 | INFO     | sum of deviations: -132482314213.93651
[2026-03-12 15:47:56] 2026-03-12 19:47:05,072 | INFO     | mean x: 1773308782.7754238
[2026-03-12 15:47:56] 2026-03-12 19:47:05,072 | INFO     | mean y: 2536188.622881356
[2026-03-12 15:47:56] 2026-03-12 19:47:05,072 | INFO     | intersect: 463667111.546557
[2026-03-12 15:47:56] 2026-03-12 19:47:05,073 | INFO     | chi2: 3.9664394044562856
[2026-03-12 15:47:56] 2026-03-12 19:47:05,073 | INFO     | current chi2=3.9664394044562856 (change=17.4086173615052 %)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,074 | INFO     | left removable region: 20
[2026-03-12 15:47:56] 2026-03-12 19:47:05,075 | INFO     | sum of square deviations: 482749946441.01105
[2026-03-12 15:47:56] 2026-03-12 19:47:05,108 | INFO     | sum of deviations: 169910770393.10858
[2026-03-12 15:47:56] 2026-03-12 19:47:05,108 | INFO     | mean x: 1773308752.290768
[2026-03-12 15:47:56] 2026-03-12 19:47:05,109 | INFO     | mean y: 2547235.6643658327
[2026-03-12 15:47:56] 2026-03-12 19:47:05,109 | INFO     | intersect: -621594224.0455296
[2026-03-12 15:47:56] 2026-03-12 19:47:05,110 | INFO     | chi2: 0.20294731674955813
[2026-03-12 15:47:56] 2026-03-12 19:47:05,110 | INFO     | current memory leak: 0.35 B/s (using 1159 data points, chi2=0.20)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | could have reported an average CPU frequency of 2599 MHz (44 samples)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | ..............................
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . Timing measurements:
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . get job = 1 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . initial setup = 70 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . payload setup = 85 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . stage-in = 1 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,112 | INFO     | . payload execution = 72653 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,113 | INFO     | . stage-out = 13 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,113 | INFO     | . log creation = 4 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,113 | INFO     | ..............................
[2026-03-12 15:47:56] 2026-03-12 19:47:05,263 | INFO     | time since job start (72790s) is within the limit (349056.0s)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | job summary report
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | --------------------------------------------------
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | PanDA job id: 7036700453
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | task id: 48838577
[2026-03-12 15:47:56] 2026-03-12 19:47:05,336 | INFO     | errors: (none)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | pilot state: finished 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | transexitcode: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | exeerrorcode: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | exeerrordiag: 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | exitcode: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | exitmsg: OK
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | cpuconsumptiontime: 57863 s
[2026-03-12 15:47:56] 2026-03-12 19:47:05,337 | INFO     | nevents: 400
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | neventsw: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | pid: 1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | pgrp: 1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | corecount: 8
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | event service: False
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | sizes: {0: 2279144, 2: 2279745, 3: 2279829, 5: 2279857, 6: 2279913, 8: 2279913, 9: 2279913, 10: 2280502, 11: 2280530, 23: 2280558, 72745: 2334933, 72746: 2335212, 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | --------------------------------------------------
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | 
[2026-03-12 15:47:56] 2026-03-12 19:47:05,338 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-12 15:47:56] 2026-03-12 19:47:05,623 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,623 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,626 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 15:47:56] 2026-03-12 19:47:05,626 | INFO     | job 7036700453 has completed (purged errors)
[2026-03-12 15:47:56] 2026-03-12 19:47:05,626 | INFO     | overall cleanup function is called
[2026-03-12 15:47:56] 2026-03-12 19:47:06,704 | INFO     | --- collectZombieJob: --- 10, [1384398]
[2026-03-12 15:47:56] 2026-03-12 19:47:06,704 | INFO     | zombie collector waiting for pid 1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:06,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 15:47:56] 2026-03-12 19:47:06,704 | INFO     | collected zombie processes
[2026-03-12 15:47:56] 2026-03-12 19:47:06,704 | INFO     | will attempt to kill all subprocesses of pid=1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:12,454 | INFO     | PID=1373691 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 15:47:56] 2026-03-12 19:47:12,579 | INFO     | .. there are 44 such processes running
[2026-03-12 15:47:56] 2026-03-12 19:47:13,164 | INFO     | process IDs to be killed: [1384398] (in reverse order)
[2026-03-12 15:47:56] 2026-03-12 19:47:14,598 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 15:47:56] 2026-03-12 19:47:14,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 15:47:56] 2026-03-12 19:47:15,044 | INFO     | did not find any defunct processes belonging to 1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:15,279 | INFO     | did not find any defunct processes belonging to 1384398
[2026-03-12 15:47:56] 2026-03-12 19:47:15,280 | INFO     | ready for new job
[2026-03-12 15:47:56] 2026-03-12 19:47:15,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 15:47:56] 2026-03-12 19:47:15,288 | INFO     | **************************************
[2026-03-12 15:47:56] 2026-03-12 19:47:15,288 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 15:47:56] 2026-03-12 19:47:15,288 | INFO     | **************************************
[2026-03-12 15:47:56] 2026-03-12 19:47:15,288 | INFO     | 
[2026-03-12 15:47:56] 2026-03-12 19:47:15,294 | INFO     | architecture information:
[2026-03-12 15:47:56] 2026-03-12 19:47:15,295 | INFO     | executing command: cat /etc/os-release
[2026-03-12 15:47:56] 2026-03-12 19:47:15,337 | INFO     | cat /etc/os-release:
[2026-03-12 15:47:56] NAME="CentOS Linux"
[2026-03-12 15:47:56] VERSION="7 (Core)"
[2026-03-12 15:47:56] ID="centos"
[2026-03-12 15:47:56] ID_LIKE="rhel fedora"
[2026-03-12 15:47:56] VERSION_ID="7"
[2026-03-12 15:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 15:47:56] ANSI_COLOR="0;31"
[2026-03-12 15:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 15:47:56] HOME_URL="https://www.centos.org/"
[2026-03-12 15:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 15:47:56] 
[2026-03-12 15:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 15:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 15:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 15:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 15:47:56] 
[2026-03-12 15:47:56] 2026-03-12 19:47:15,338 | INFO     | **************************************
[2026-03-12 15:47:56] 2026-03-12 19:47:15,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-12 15:47:56] 2026-03-12 19:47:16,044 | INFO     | sufficient remaining disk space (74586259456 B)
[2026-03-12 15:47:56] 2026-03-12 19:47:16,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 15:47:56] 2026-03-12 19:47:16,045 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 15:47:56] 2026-03-12 19:47:16,045 | INFO     | update_server=False
[2026-03-12 15:47:56] 2026-03-12 19:47:16,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 15:47:56] 2026-03-12 19:47:16,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 15:47:56] 2026-03-12 19:47:16,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 15:47:56] 2026-03-12 19:47:16,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:47:56] 2026-03-12 19:47:16,062 | INFO     | will abort loop
[2026-03-12 15:47:56] 2026-03-12 19:47:16,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 15:47:56] 2026-03-12 19:47:16,567 | INFO     | all data control threads have been joined
[2026-03-12 15:47:56] 2026-03-12 19:47:16,616 | INFO     | all job control threads have been joined
[2026-03-12 15:47:56] 2026-03-12 19:47:16,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 15:47:56] 2026-03-12 19:47:16,977 | INFO     | all payload control threads have been joined
[2026-03-12 15:47:56] 2026-03-12 19:47:17,067 | INFO     | [job] job monitor thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,080 | INFO     | [job] retrieve thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,181 | INFO     | [payload] validate_post thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,181 | INFO     | [payload] failed_post thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,583 | INFO     | [data] control thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,629 | INFO     | [job] control thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,818 | INFO     | [data] copytool_in thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,819 | INFO     | [job] validate thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,843 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,854 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:17,989 | INFO     | [payload] control thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:18,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 15:47:56] 2026-03-12 19:47:18,439 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:18,825 | INFO     | [data] copytool_out thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:19,406 | INFO     | [job] queue monitor thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:20,439 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 15:47:56] 2026-03-12 19:47:39,162 | INFO     | [monitor] cgroup control has ended
[2026-03-12 15:47:56] 2026-03-12 19:47:39,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668524275520)>', '<ExcThread(monitor, started 140667720279808)>']
[2026-03-12 15:47:56] 2026-03-12 19:47:44,875 | INFO     | all workflow threads have been joined
[2026-03-12 15:47:56] 2026-03-12 19:47:44,875 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 15:47:56] 2026-03-12 19:47:44,875 | INFO     | traces error code: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:44,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 15:47:56] 2026-03-12 19:47:54,163 | INFO     | PID=1373691 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 15:47:56] 2026-03-12 19:47:54,164 | INFO     | .. there are 44 such processes running
[2026-03-12 15:47:56] 2026-03-12 19:47:54,172 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 15:47:56] 2026-03-12 19:47:54,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 15:47:56] 2026-03-12 19:47:54,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 15:47:56] 2026-03-12 19:47:54,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 15:47:56] 2026-03-12 19:47:54,173 | INFO     | [monitor] control thread has ended
[2026-03-12 15:47:56] 2026-03-12 19:47:54,870 [wrapper] ==== pilot stdout END ====
[2026-03-12 15:47:56] 2026-03-12 19:47:54,928 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 15:47:56] 2026-03-12 19:47:55,002 [wrapper] pilotpid: 1373691
[2026-03-12 15:47:56] 2026-03-12 19:47:55,065 [wrapper] Pilot exit status: 0
[2026-03-12 15:47:56] 2026-03-12 19:47:55,198 [wrapper] pandaids: 7036700453
[2026-03-12 15:47:56] 2026-03-12 19:47:55,417 [wrapper] cleanup supervisor_pilot 1210015 1373692
[2026-03-12 15:47:56] 2026-03-12 19:47:55,420 [wrapper] Test setup, not cleaning
[2026-03-12 15:47:56] 2026-03-12 19:47:55,460 [wrapper] apfmon messages muted
[2026-03-12 15:47:56] 2026-03-12 19:47:55,506 [wrapper] ==== wrapper stdout END ====
[2026-03-12 15:47:56] 2026-03-12 19:47:55,558 [wrapper] ==== wrapper stderr END ====
[2026-03-12 15:47:56]  *** Error codes and diagnostics ***
[2026-03-12 15:47:56]     "exeErrorCode": 0,
[2026-03-12 15:47:56]     "exeErrorDiag": "",
[2026-03-12 15:47:56]     "pilotErrorCode": 0,
[2026-03-12 15:47:56]     "pilotErrorDiag": "",
[2026-03-12 15:47:56]  *** Listing of results directory ***
[2026-03-12 15:47:56] total 525060
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 15:50 pilot3.tar.gz
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 16:16 queuedata.json
[2026-03-12 15:47:56] -rwx------. 1 boincer umatlas     36322 Mar  3 16:17 runpilot2-wrapper.sh
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas       100 Mar 11 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 15:47:56] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 19:30 run_atlas
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas       105 Mar 11 19:30 job.xml
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas 290933969 Mar 11 19:30 EVNT.48220197._000175.pool.root.1
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 19:30 start_atlas.sh
[2026-03-12 15:47:56] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 19:30 shared
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas    597966 Mar 11 19:30 input.tar.gz
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas         0 Mar 11 19:30 boinc_lockfile
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas      2564 Mar 11 19:30 pandaJob.out
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas        57 Mar 11 19:30 setup.sh.local
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas       433 Mar 11 19:33 workernode_map.json
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   1006235 Mar 11 19:33 agis_schedconf.cvmfs.json
[2026-03-12 15:47:56] drwx------. 5 boincer umatlas      4096 Mar 11 19:33 pilot3
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas      6659 Mar 12 15:36 init_data.xml
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas 227154906 Mar 12 15:40 HITS.48838577._004467.pool.root.1
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas       531 Mar 12 15:41 boinc_task_state.xml
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas      1054 Mar 12 15:46 memory_monitor_summary.json
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   1511578 Mar 12 15:46 agis_ddmendpoints.agis.ALL.json
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   1011032 Mar 12 15:46 log.48838577._004467.job.log.tgz.1
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas      6395 Mar 12 15:47 heartbeat.json
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 15:47 boinc_mmap_file
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas        28 Mar 12 15:47 wrapper_checkpoint.txt
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas        95 Mar 12 15:47 pilot_heartbeat.json
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas       823 Mar 12 15:47 pilotlog.txt
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   6808095 Mar 12 15:47 log.48838577._004467.job.log.1
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas       357 Mar 12 15:47 output.list
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas       620 Mar 12 15:47 runtime_log
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   7833600 Mar 12 15:47 result.tar.gz
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas      9332 Mar 12 15:47 runtime_log.err
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas       659 Mar 12 15:47 K8eLDmAImH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmugHLDmkpwFSm.diag
[2026-03-12 15:47:56] -rw-r--r--. 1 boincer umatlas     21033 Mar 12 15:47 stderr.txt
[2026-03-12 15:47:56] HITS file was successfully produced:
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas 227154906 Mar 12 15:40 shared/HITS.pool.root.1
[2026-03-12 15:47:56]  *** Contents of shared directory: ***
[2026-03-12 15:47:56] total 514208
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas 290933969 Mar 11 19:30 ATLAS.root_0
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 19:30 start_atlas.sh
[2026-03-12 15:47:56] -rw-r--r--. 2 boincer umatlas    597966 Mar 11 19:30 input.tar.gz
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas 227154906 Mar 12 15:40 HITS.pool.root.1
[2026-03-12 15:47:56] -rw-------. 1 boincer umatlas   7833600 Mar 12 15:47 result.tar.gz
15:47:58 (1368105): run_atlas exited; CPU time 60695.216781
15:47:58 (1368105): called boinc_finish(0)

</stderr_txt>
]]>

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