Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:51 (3917920): wrapper (7.7.26015): starting
14:17:51 (3917920): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 14:17:51] Arguments: --nthreads 4
[2026-03-13 14:17:51] Threads: 4
[2026-03-13 14:17:51] Checking for CVMFS
[2026-03-13 14:17:51] No cvmfs_config command found, will try listing directly
[2026-03-13 14:17:51] CVMFS is ok
[2026-03-13 14:17:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 14:17:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 14:17:51] Further information can be found at the LHC@home message board.
[2026-03-13 14:17:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 14:17:51] Checking for apptainer binary...
[2026-03-13 14:17:51] which: no apptainer in ((null))
[2026-03-13 14:17:51] apptainer is not installed, using version from CVMFS
[2026-03-13 14:17:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 14:17:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-13 14:17:51] apptainer works
[2026-03-13 14:17:51] Set ATHENA_PROC_NUMBER=4
[2026-03-13 14:17:51] Set ATHENA_CORE_NUMBER=4
[2026-03-13 14:17:51] Starting ATLAS job with PandaID=7050074120
[2026-03-13 14:17:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 21:42:39]  *** The last 200 lines of the pilot log: ***
[2026-03-13 21:42:39] 2026-03-13 20:40:50,532 | INFO     | total number of processed events: 400 (read)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,544 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7050074120/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,545 | INFO     | extracted standard info from prmon json
[2026-03-13 21:42:39] 2026-03-13 20:40:50,545 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 21:42:39] 2026-03-13 20:40:50,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 21:42:39] 2026-03-13 20:40:50,546 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 21:42:39] 2026-03-13 20:40:50,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 21:42:39] 2026-03-13 20:40:50,553 | INFO     | fitting pss+swap vs Time
[2026-03-13 21:42:39] 2026-03-13 20:40:50,554 | INFO     | sum of square deviations: 25523715770.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,559 | INFO     | sum of deviations: 39681820223.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,559 | INFO     | mean x: 1773421148.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,559 | INFO     | mean y: 2350171.404597701
[2026-03-13 21:42:39] 2026-03-13 20:40:50,559 | INFO     | intersect: -2754794587.9535446
[2026-03-13 21:42:39] 2026-03-13 20:40:50,560 | INFO     | chi2: 1.283224476088396
[2026-03-13 21:42:39] 2026-03-13 20:40:50,561 | INFO     | sum of square deviations: 24653662247.5
[2026-03-13 21:42:39] 2026-03-13 20:40:50,565 | INFO     | sum of deviations: 38804334613.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,565 | INFO     | mean x: 1773420995.5
[2026-03-13 21:42:39] 2026-03-13 20:40:50,566 | INFO     | mean y: 2350017.5953488373
[2026-03-13 21:42:39] 2026-03-13 20:40:50,566 | INFO     | intersect: -2788976521.5714593
[2026-03-13 21:42:39] 2026-03-13 20:40:50,566 | INFO     | chi2: 1.2833588468269561
[2026-03-13 21:42:39] 2026-03-13 20:40:50,566 | INFO     | current chi2=1.2833588468269561 (change=-0.01047133537927436 %)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,567 | INFO     | right removable region: 429
[2026-03-13 21:42:39] 2026-03-13 20:40:50,567 | INFO     | sum of square deviations: 24653662247.5
[2026-03-13 21:42:39] 2026-03-13 20:40:50,572 | INFO     | sum of deviations: -13289330710.499998
[2026-03-13 21:42:39] 2026-03-13 20:40:50,572 | INFO     | mean x: 1773421300.5
[2026-03-13 21:42:39] 2026-03-13 20:40:50,572 | INFO     | mean y: 2359396.5790697676
[2026-03-13 21:42:39] 2026-03-13 20:40:50,572 | INFO     | intersect: 958305897.1351631
[2026-03-13 21:42:39] 2026-03-13 20:40:50,573 | INFO     | chi2: 0.02593325306531931
[2026-03-13 21:42:39] 2026-03-13 20:40:50,573 | INFO     | current chi2=0.02593325306531931 (change=97.97905560963342 %)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,574 | INFO     | sum of square deviations: 23803609100.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,578 | INFO     | sum of deviations: -7407776376.999997
[2026-03-13 21:42:39] 2026-03-13 20:40:50,578 | INFO     | mean x: 1773421453.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,578 | INFO     | mean y: 2358338.2447058824
[2026-03-13 21:42:39] 2026-03-13 20:40:50,578 | INFO     | intersect: 554254039.8926721
[2026-03-13 21:42:39] 2026-03-13 20:40:50,579 | INFO     | chi2: 0.01705451623615003
[2026-03-13 21:42:39] 2026-03-13 20:40:50,579 | INFO     | current chi2=0.01705451623615003 (change=34.236880374421155 %)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,580 | INFO     | sum of square deviations: 22973323765.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,584 | INFO     | sum of deviations: -4204595616.999989
[2026-03-13 21:42:39] 2026-03-13 20:40:50,584 | INFO     | mean x: 1773421605.5
[2026-03-13 21:42:39] 2026-03-13 20:40:50,585 | INFO     | mean y: 2357750.7047619047
[2026-03-13 21:42:39] 2026-03-13 20:40:50,585 | INFO     | intersect: 326930754.84874386
[2026-03-13 21:42:39] 2026-03-13 20:40:50,585 | INFO     | chi2: 0.015008716580029889
[2026-03-13 21:42:39] 2026-03-13 20:40:50,585 | INFO     | current chi2=0.015008716580029889 (change=11.995647532843588 %)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,585 | INFO     | left removable region: 30
[2026-03-13 21:42:39] 2026-03-13 20:40:50,586 | INFO     | sum of square deviations: 19696741400.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,590 | INFO     | sum of deviations: 1614474556.000001
[2026-03-13 21:42:39] 2026-03-13 20:40:50,591 | INFO     | mean x: 1773421880.0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,591 | INFO     | mean y: 2356431.1754385964
[2026-03-13 21:42:39] 2026-03-13 20:40:50,591 | INFO     | intersect: -143004897.59306964
[2026-03-13 21:42:39] 2026-03-13 20:40:50,591 | INFO     | chi2: 0.011933652334695267
[2026-03-13 21:42:39] 2026-03-13 20:40:50,592 | INFO     | current memory leak: 0.08 B/s (using 399 data points, chi2=0.01)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,592 | INFO     | could have reported an average CPU frequency of 2519 MHz (18 samples)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,592 | INFO     | ..............................
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . Timing measurements:
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . get job = 0 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . initial setup = 6 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . payload setup = 6 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . stage-in = 0 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . payload execution = 26537 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . stage-out = 1 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | . log creation = 0 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,593 | INFO     | ..............................
[2026-03-13 21:42:39] 2026-03-13 20:40:50,689 | INFO     | 
[2026-03-13 21:42:39] 2026-03-13 20:40:50,689 | INFO     | job summary report
[2026-03-13 21:42:39] 2026-03-13 20:40:50,689 | INFO     | --------------------------------------------------
[2026-03-13 21:42:39] 2026-03-13 20:40:50,689 | INFO     | PanDA job id: 7050074120
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | task id: 48966951
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | errors: (none)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | pilot state: finished 
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | transexitcode: 0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | exeerrorcode: 0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | exeerrordiag: 
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | exitcode: 0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | exitmsg: OK
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | cpuconsumptiontime: 100699 s
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | nevents: 400
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | neventsw: 0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,690 | INFO     | pid: 3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | pgrp: 3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | corecount: 4
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | event service: False
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | sizes: {0: 2279840, 1: 2280244, 11: 2280244, 26548: 2316953, 26549: 2325973, 26551: 2326029, 26552: 2326351}
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | --------------------------------------------------
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | 
[2026-03-13 21:42:39] 2026-03-13 20:40:50,691 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-13 21:42:39] 2026-03-13 20:40:50,714 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 21:42:39] 2026-03-13 20:40:50,716 | INFO     | job 7050074120 has completed (purged errors)
[2026-03-13 21:42:39] 2026-03-13 20:40:50,717 | INFO     | overall cleanup function is called
[2026-03-13 21:42:39] 2026-03-13 20:40:51,725 | INFO     | --- collectZombieJob: --- 10, [3926540]
[2026-03-13 21:42:39] 2026-03-13 20:40:51,725 | INFO     | zombie collector waiting for pid 3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:51,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 21:42:39] 2026-03-13 20:40:51,725 | INFO     | collected zombie processes
[2026-03-13 21:42:39] 2026-03-13 20:40:51,725 | INFO     | will attempt to kill all subprocesses of pid=3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:52,176 | INFO     | process IDs to be killed: [3926540] (in reverse order)
[2026-03-13 21:42:39] 2026-03-13 20:40:52,321 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 21:42:39] 2026-03-13 20:40:52,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 21:42:39] 2026-03-13 20:40:52,336 | INFO     | did not find any defunct processes belonging to 3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:52,350 | INFO     | did not find any defunct processes belonging to 3926540
[2026-03-13 21:42:39] 2026-03-13 20:40:52,350 | INFO     | ready for new job
[2026-03-13 21:42:39] 2026-03-13 20:40:52,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 21:42:39] 2026-03-13 20:40:52,354 | INFO     | **************************************
[2026-03-13 21:42:39] 2026-03-13 20:40:52,354 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 21:42:39] 2026-03-13 20:40:52,354 | INFO     | **************************************
[2026-03-13 21:42:39] 2026-03-13 20:40:52,354 | INFO     | 
[2026-03-13 21:42:39] 2026-03-13 20:40:52,358 | INFO     | architecture information:
[2026-03-13 21:42:39] 2026-03-13 20:40:52,359 | INFO     | executing command: cat /etc/os-release
[2026-03-13 21:42:39] 2026-03-13 20:40:52,378 | INFO     | cat /etc/os-release:
[2026-03-13 21:42:39] NAME="CentOS Linux"
[2026-03-13 21:42:39] VERSION="7 (Core)"
[2026-03-13 21:42:39] ID="centos"
[2026-03-13 21:42:39] ID_LIKE="rhel fedora"
[2026-03-13 21:42:39] VERSION_ID="7"
[2026-03-13 21:42:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 21:42:39] ANSI_COLOR="0;31"
[2026-03-13 21:42:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 21:42:39] HOME_URL="https://www.centos.org/"
[2026-03-13 21:42:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 21:42:39] 
[2026-03-13 21:42:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 21:42:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 21:42:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 21:42:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 21:42:39] 
[2026-03-13 21:42:39] 2026-03-13 20:40:52,378 | INFO     | **************************************
[2026-03-13 21:42:39] 2026-03-13 20:40:52,881 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-13 21:42:39] 2026-03-13 20:40:52,900 | INFO     | sufficient remaining disk space (21059600384 B)
[2026-03-13 21:42:39] 2026-03-13 20:40:52,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 21:42:39] 2026-03-13 20:40:52,901 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 21:42:39] 2026-03-13 20:40:52,901 | INFO     | update_server=False
[2026-03-13 21:42:39] 2026-03-13 20:40:52,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 21:42:39] 2026-03-13 20:40:53,236 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 21:42:39] 2026-03-13 20:40:53,236 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 21:42:39] 2026-03-13 20:40:53,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 21:42:39] 2026-03-13 20:40:53,236 | INFO     | will abort loop
[2026-03-13 21:42:39] 2026-03-13 20:40:53,514 | INFO     | all data control threads have been joined
[2026-03-13 21:42:39] 2026-03-13 20:40:53,906 | INFO     | [job] retrieve thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:53,929 | INFO     | [data] copytool_in thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:53,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 21:42:39] 2026-03-13 20:40:54,051 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,181 | INFO     | all job control threads have been joined
[2026-03-13 21:42:39] 2026-03-13 20:40:54,200 | INFO     | all payload control threads have been joined
[2026-03-13 21:42:39] 2026-03-13 20:40:54,241 | INFO     | [job] job monitor thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,325 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,372 | INFO     | [payload] failed_post thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,415 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,420 | INFO     | [job] validate thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,519 | INFO     | [data] control thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:54,546 | INFO     | [payload] validate_post thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:55,186 | INFO     | [job] control thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:55,205 | INFO     | [payload] control thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:55,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 21:42:39] 2026-03-13 20:40:55,989 | INFO     | [data] copytool_out thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:40:56,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 21:42:39] 2026-03-13 20:40:56,706 | INFO     | [job] queue monitor thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:41:00,049 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:41:03,324 | INFO     | job.realtimelogging is not enabled
[2026-03-13 21:42:39] 2026-03-13 20:41:04,329 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 21:42:39] 2026-03-13 20:41:23,049 | INFO     | PID=3921701 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 21:42:39] 2026-03-13 20:41:23,049 | INFO     | .. there are 12 such processes running
[2026-03-13 21:42:39] 2026-03-13 20:41:23,050 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 21:42:39] 2026-03-13 20:41:23,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 21:42:39] 2026-03-13 20:41:23,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 21:42:39] 2026-03-13 20:41:52,508 | INFO     | [monitor] cgroup control has ended
[2026-03-13 21:42:39] 2026-03-13 20:41:54,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22936911419200)>', '<ExcThread(monitor, started 22936672282368)>']
[2026-03-13 21:42:39] 2026-03-13 20:41:55,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 21:42:39] 2026-03-13 20:41:55,211 | INFO     | [monitor] control thread has ended
[2026-03-13 21:42:39] 2026-03-13 20:41:59,271 | INFO     | all workflow threads have been joined
[2026-03-13 21:42:39] 2026-03-13 20:41:59,271 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 21:42:39] 2026-03-13 20:41:59,271 | INFO     | traces error code: 0
[2026-03-13 21:42:39] 2026-03-13 20:41:59,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 21:42:39] 2026-03-13 20:41:59,419 [wrapper] ==== pilot stdout END ====
[2026-03-13 21:42:39] 2026-03-13 20:41:59,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 21:42:39] 2026-03-13 20:41:59,425 [wrapper] pilotpid: 3921701
[2026-03-13 21:42:39] 2026-03-13 20:41:59,428 [wrapper] Pilot exit status: 0
[2026-03-13 21:42:39] 2026-03-13 20:41:59,440 [wrapper] pandaids: 7050074120
[2026-03-13 21:42:39] 2026-03-13 20:41:59,530 [wrapper] cleanup supervisor_pilot  206268 3921702
[2026-03-13 21:42:39] 2026-03-13 20:41:59,533 [wrapper] Test setup, not cleaning
[2026-03-13 21:42:39] 2026-03-13 20:41:59,537 [wrapper] apfmon messages muted
[2026-03-13 21:42:39] 2026-03-13 20:41:59,540 [wrapper] ==== wrapper stdout END ====
[2026-03-13 21:42:39] 2026-03-13 20:41:59,543 [wrapper] ==== wrapper stderr END ====
[2026-03-13 21:42:39]  *** Error codes and diagnostics ***
[2026-03-13 21:42:39]     "exeErrorCode": 0,
[2026-03-13 21:42:39]     "exeErrorDiag": "",
[2026-03-13 21:42:39]     "pilotErrorCode": 0,
[2026-03-13 21:42:39]     "pilotErrorDiag": "",
[2026-03-13 21:42:39]  *** Listing of results directory ***
[2026-03-13 21:42:39] total 510120
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc    585013 Mar 11 18:53 pilot3.tar.gz
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc      5111 Mar 11 19:05 queuedata.json
[2026-03-13 21:42:39] -rwx------. 1 boinc boinc     36322 Mar 11 19:05 runpilot2-wrapper.sh
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc       100 Mar 13 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 21:42:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 14:17 run_atlas
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc       105 Mar 13 14:17 job.xml
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc      6563 Mar 13 14:17 init_data.xml
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc 237506981 Mar 13 14:17 EVNT.48966948._000092.pool.root.1
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc    597511 Mar 13 14:17 input.tar.gz
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc     15845 Mar 13 14:17 start_atlas.sh
[2026-03-13 21:42:39] drwxrwx--x. 2 boinc boinc      4096 Mar 13 14:17 shared
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc         0 Mar 13 14:17 boinc_lockfile
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc      2539 Mar 13 14:17 pandaJob.out
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc   1006481 Mar 13 14:18 agis_schedconf.cvmfs.json
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc       452 Mar 13 14:18 workernode_map.json
[2026-03-13 21:42:39] drwx------. 5 boinc boinc      4096 Mar 13 14:18 pilot3
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc 272408405 Mar 13 21:40 HITS.48966951._002314.pool.root.1
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc       530 Mar 13 21:40 boinc_task_state.xml
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc      1037 Mar 13 21:40 memory_monitor_summary.json
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc   1511579 Mar 13 21:40 agis_ddmendpoints.agis.ALL.json
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc    574161 Mar 13 21:40 log.48966951._002314.job.log.tgz.1
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc      6406 Mar 13 21:40 heartbeat.json
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc        95 Mar 13 21:41 pilot_heartbeat.json
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc      5087 Mar 13 21:41 pilotlog.txt
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc   3681567 Mar 13 21:41 log.48966951._002314.job.log.1
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc       357 Mar 13 21:41 output.list
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc       620 Mar 13 21:41 runtime_log
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc   4270080 Mar 13 21:41 result.tar.gz
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc      9205 Mar 13 21:41 runtime_log.err
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc       667 Mar 13 21:41 jOqNDmZ7cK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpmhLDmf99IXn.diag
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc        28 Mar 13 21:42 wrapper_checkpoint.txt
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc      8192 Mar 13 21:42 boinc_mmap_file
[2026-03-13 21:42:39] -rw-r--r--. 1 boinc boinc     20850 Mar 13 21:42 stderr.txt
[2026-03-13 21:42:39] HITS file was successfully produced:
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc 272408405 Mar 13 21:40 shared/HITS.pool.root.1
[2026-03-13 21:42:39]  *** Contents of shared directory: ***
[2026-03-13 21:42:39] total 502748
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc 237506981 Mar 13 14:17 ATLAS.root_0
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc    597511 Mar 13 14:17 input.tar.gz
[2026-03-13 21:42:39] -rw-r--r--. 2 boinc boinc     15845 Mar 13 14:17 start_atlas.sh
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc 272408405 Mar 13 21:40 HITS.pool.root.1
[2026-03-13 21:42:39] -rw-------. 1 boinc boinc   4270080 Mar 13 21:41 result.tar.gz
21:42:41 (3917920): run_atlas exited; CPU time 101915.448574
21:42:41 (3917920): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN