Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:35:15 (3167794): wrapper (7.7.26015): starting
13:35:15 (3167794): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 13:35:15] Arguments: --nthreads 4
[2026-03-13 13:35:15] Threads: 4
[2026-03-13 13:35:15] Checking for CVMFS
[2026-03-13 13:35:15] No cvmfs_config command found, will try listing directly
[2026-03-13 13:35:15] CVMFS is ok
[2026-03-13 13:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 13:35:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 13:35:15] Further information can be found at the LHC@home message board.
[2026-03-13 13:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 13:35:15] Checking for apptainer binary...
[2026-03-13 13:35:15] which: no apptainer in ((null))
[2026-03-13 13:35:15] apptainer is not installed, using version from CVMFS
[2026-03-13 13:35:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 13:35:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot140/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-13 13:35:15] apptainer works
[2026-03-13 13:35:15] Set ATHENA_PROC_NUMBER=4
[2026-03-13 13:35:15] Set ATHENA_CORE_NUMBER=4
[2026-03-13 13:35:15] Starting ATLAS job with PandaID=7050072341
[2026-03-13 13:35:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot140/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 16:43:36]  *** The last 200 lines of the pilot log: ***
[2026-03-13 16:43:36] 2026-03-13 15:40:01,692 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 16:43:36] 2026-03-13 15:40:01,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 16:43:36] 2026-03-13 15:40:01,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 16:43:36] 2026-03-13 15:40:01,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 16:43:36] 2026-03-13 15:40:01,695 | INFO     | fitting pss+swap vs Time
[2026-03-13 16:43:36] 2026-03-13 15:40:01,695 | INFO     | sum of square deviations: 1869302025.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | sum of deviations: 9172435830.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | mean x: 1773410868.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | mean y: 2312646.587912088
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | intersect: -8699597034.420736
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | chi2: 1.8758025661522246
[2026-03-13 16:43:36] 2026-03-13 15:40:01,696 | INFO     | sum of square deviations: 1719429448.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | sum of deviations: 19958766107.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | mean x: 1773410716.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | mean y: 2323368.04519774
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | intersect: -20583045652.74373
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | chi2: 1.1037188686528685
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | current chi2=1.1037188686528685 (change=41.16017919109191 %)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,697 | INFO     | sum of square deviations: 1577789583.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | sum of deviations: 19335723026.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | mean x: 1773410563.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | mean y: 2322697.081395349
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | intersect: -21730724495.44693
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | chi2: 1.1043059410430747
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | current chi2=1.1043059410430747 (change=-0.05319039176368449 %)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | right removable region: 171
[2026-03-13 16:43:36] 2026-03-13 15:40:01,698 | INFO     | sum of square deviations: 1719429448.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | sum of deviations: -9137974338.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | mean x: 1773411021.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | mean y: 2330971.7005649717
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | intersect: 9427192468.329056
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | chi2: 0.790517278399053
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | current chi2=0.790517278399053 (change=57.85711712610478 %)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,699 | INFO     | sum of square deviations: 1577789583.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | sum of deviations: -9384488788.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | mean x: 1773411173.5
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | mean y: 2331233.5988372094
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | intersect: 10550351992.78481
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | chi2: 0.7905443300838001
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | current chi2=0.7905443300838001 (change=-0.0034220232101609227 %)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | left removable region: 20
[2026-03-13 16:43:36] 2026-03-13 15:40:01,700 | INFO     | sum of square deviations: 1067554900.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | sum of deviations: 1289361270.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | mean x: 1773411143.0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | mean y: 2342915.9602649007
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | intersect: -2139530671.5907187
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | chi2: 0.0005234797953038406
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | current memory leak: 1.21 B/s (using 151 data points, chi2=0.00)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | could have reported an average CPU frequency of 3564 MHz (10 samples)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | ..............................
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | . Timing measurements:
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | . get job = 0 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | . initial setup = 5 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,701 | INFO     | . payload setup = 4 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,702 | INFO     | . stage-in = 0 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,702 | INFO     | . payload execution = 11049 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,702 | INFO     | . stage-out = 0 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,702 | INFO     | . log creation = 0 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,702 | INFO     | ..............................
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | 
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | job summary report
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | --------------------------------------------------
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | PanDA job id: 7050072341
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | task id: 48966932
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | errors: (none)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | pilot state: finished 
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | transexitcode: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | exeerrorcode: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | exeerrordiag: 
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | exitcode: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | exitmsg: OK
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | cpuconsumptiontime: 42768 s
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | nevents: 400
[2026-03-13 16:43:36] 2026-03-13 15:40:01,751 | INFO     | neventsw: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | pid: 3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | pgrp: 3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | corecount: 4
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | event service: False
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | sizes: {0: 2280242, 11: 2280242, 11057: 2309479, 11060: 2318501, 11062: 2318751}
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | --------------------------------------------------
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | 
[2026-03-13 16:43:36] 2026-03-13 15:40:01,752 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot140/slots/0
[2026-03-13 16:43:36] 2026-03-13 15:40:01,774 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | job 7050072341 has completed (purged errors)
[2026-03-13 16:43:36] 2026-03-13 15:40:01,775 | INFO     | overall cleanup function is called
[2026-03-13 16:43:36] 2026-03-13 15:40:02,783 | INFO     | --- collectZombieJob: --- 10, [3187733]
[2026-03-13 16:43:36] 2026-03-13 15:40:02,783 | INFO     | zombie collector waiting for pid 3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:02,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 16:43:36] 2026-03-13 15:40:02,783 | INFO     | collected zombie processes
[2026-03-13 16:43:36] 2026-03-13 15:40:02,783 | INFO     | will attempt to kill all subprocesses of pid=3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:03,697 | INFO     | process IDs to be killed: [3187733] (in reverse order)
[2026-03-13 16:43:36] 2026-03-13 15:40:03,900 | WARNING  | process 3187733 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 16:43:36] 2026-03-13 15:40:04,225 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 16:43:36] 2026-03-13 15:40:04,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 16:43:36] 2026-03-13 15:40:04,373 | INFO     | did not find any defunct processes belonging to 3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:04,442 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 16:43:36] 2026-03-13 15:40:04,478 | INFO     | did not find any defunct processes belonging to 3187733
[2026-03-13 16:43:36] 2026-03-13 15:40:04,478 | INFO     | ready for new job
[2026-03-13 16:43:36] 2026-03-13 15:40:04,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 16:43:36] 2026-03-13 15:40:04,480 | INFO     | **************************************
[2026-03-13 16:43:36] 2026-03-13 15:40:04,480 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 16:43:36] 2026-03-13 15:40:04,480 | INFO     | **************************************
[2026-03-13 16:43:36] 2026-03-13 15:40:04,480 | INFO     | 
[2026-03-13 16:43:36] 2026-03-13 15:40:04,497 | INFO     | architecture information:
[2026-03-13 16:43:36] 2026-03-13 15:40:04,499 | INFO     | executing command: cat /etc/os-release
[2026-03-13 16:43:36] 2026-03-13 15:40:04,538 | INFO     | cat /etc/os-release:
[2026-03-13 16:43:36] NAME="CentOS Linux"
[2026-03-13 16:43:36] VERSION="7 (Core)"
[2026-03-13 16:43:36] ID="centos"
[2026-03-13 16:43:36] ID_LIKE="rhel fedora"
[2026-03-13 16:43:36] VERSION_ID="7"
[2026-03-13 16:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 16:43:36] ANSI_COLOR="0;31"
[2026-03-13 16:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 16:43:36] HOME_URL="https://www.centos.org/"
[2026-03-13 16:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 16:43:36] 
[2026-03-13 16:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 16:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 16:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 16:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 16:43:36] 
[2026-03-13 16:43:36] 2026-03-13 15:40:04,538 | INFO     | **************************************
[2026-03-13 16:43:36] 2026-03-13 15:40:05,042 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-13 16:43:36] 2026-03-13 15:40:05,096 | INFO     | sufficient remaining disk space (22437429248 B)
[2026-03-13 16:43:36] 2026-03-13 15:40:05,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 16:43:36] 2026-03-13 15:40:05,097 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 16:43:36] 2026-03-13 15:40:05,097 | INFO     | update_server=False
[2026-03-13 16:43:36] 2026-03-13 15:40:05,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 16:43:36] 2026-03-13 15:40:05,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 16:43:36] 2026-03-13 15:40:05,171 | INFO     | number of running child processes to parent process 3187733: 1
[2026-03-13 16:43:36] 2026-03-13 15:40:05,172 | INFO     | maximum number of monitored processes: 6
[2026-03-13 16:43:36] 2026-03-13 15:40:05,172 | INFO     | aborting job monitoring since job object (job id=7050072341) has expired
[2026-03-13 16:43:36] 2026-03-13 15:40:05,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 16:43:36] 2026-03-13 15:40:05,172 | INFO     | will abort loop
[2026-03-13 16:43:36] 2026-03-13 15:40:05,202 | INFO     | all job control threads have been joined
[2026-03-13 16:43:36] 2026-03-13 15:40:05,415 | INFO     | all data control threads have been joined
[2026-03-13 16:43:36] 2026-03-13 15:40:06,102 | INFO     | [job] retrieve thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,178 | INFO     | [job] job monitor thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,210 | INFO     | [job] control thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,393 | INFO     | all payload control threads have been joined
[2026-03-13 16:43:36] 2026-03-13 15:40:06,429 | INFO     | [data] control thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,567 | INFO     | [payload] failed_post thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 16:43:36] 2026-03-13 15:40:06,781 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,945 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:06,958 | INFO     | [job] validate thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,104 | INFO     | [data] copytool_in thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,106 | INFO     | [data] copytool_out thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,169 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,399 | INFO     | [payload] control thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,457 | INFO     | [payload] validate_post thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:07,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 16:43:36] 2026-03-13 15:40:07,768 | INFO     | [job] queue monitor thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:11,696 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:15,670 | INFO     | job.realtimelogging is not enabled
[2026-03-13 16:43:36] 2026-03-13 15:40:16,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 16:43:36] 2026-03-13 15:40:34,010 | INFO     | PID=3175611 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 16:43:36] 2026-03-13 15:40:34,010 | INFO     | .. there are 48 such processes running
[2026-03-13 16:43:36] 2026-03-13 15:40:34,011 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 16:43:36] 2026-03-13 15:40:34,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 16:43:36] 2026-03-13 15:40:34,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 16:43:36] 2026-03-13 15:40:46,131 | INFO     | [monitor] cgroup control has ended
[2026-03-13 16:43:36] 2026-03-13 15:40:47,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22814936045376)>', '<ExcThread(monitor, started 22814687225600)>']
[2026-03-13 16:43:36] 2026-03-13 15:40:48,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 16:43:36] 2026-03-13 15:40:48,097 | INFO     | [monitor] control thread has ended
[2026-03-13 16:43:36] 2026-03-13 15:40:52,456 | INFO     | all workflow threads have been joined
[2026-03-13 16:43:36] 2026-03-13 15:40:52,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 16:43:36] 2026-03-13 15:40:52,456 | INFO     | traces error code: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:52,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 16:43:36] 2026-03-13 15:40:52,608 [wrapper] ==== pilot stdout END ====
[2026-03-13 16:43:36] 2026-03-13 15:40:52,613 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 16:43:36] 2026-03-13 15:40:52,615 [wrapper] pilotpid: 3175611
[2026-03-13 16:43:36] 2026-03-13 15:40:52,618 [wrapper] Pilot exit status: 0
[2026-03-13 16:43:36] 2026-03-13 15:40:52,629 [wrapper] pandaids: 7050072341
[2026-03-13 16:43:36] 2026-03-13 15:40:52,768 [wrapper] cleanup supervisor_pilot  384576 3175613
[2026-03-13 16:43:36] 2026-03-13 15:40:52,771 [wrapper] Test setup, not cleaning
[2026-03-13 16:43:36] 2026-03-13 15:40:52,773 [wrapper] apfmon messages muted
[2026-03-13 16:43:36] 2026-03-13 15:40:52,775 [wrapper] ==== wrapper stdout END ====
[2026-03-13 16:43:36] 2026-03-13 15:40:52,777 [wrapper] ==== wrapper stderr END ====
[2026-03-13 16:43:36]  *** Error codes and diagnostics ***
[2026-03-13 16:43:36]     "exeErrorCode": 0,
[2026-03-13 16:43:36]     "exeErrorDiag": "",
[2026-03-13 16:43:36]     "pilotErrorCode": 0,
[2026-03-13 16:43:36]     "pilotErrorDiag": "",
[2026-03-13 16:43:36]  *** Listing of results directory ***
[2026-03-13 16:43:36] total 484388
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc    585013 Mar 11 18:00 pilot3.tar.gz
[2026-03-13 16:43:36] -rwx------. 1 boinc boinc     36322 Mar 11 18:31 runpilot2-wrapper.sh
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc      5111 Mar 11 18:32 queuedata.json
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc       100 Mar 13 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 16:43:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 13:35 run_atlas
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc       105 Mar 13 13:35 job.xml
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc      6709 Mar 13 13:35 init_data.xml
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc 225763398 Mar 13 13:35 EVNT.48966930._000125.pool.root.1
[2026-03-13 16:43:36] drwxrwx--x. 2 boinc boinc      4096 Mar 13 13:35 shared
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc    597528 Mar 13 13:35 input.tar.gz
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:35 start_atlas.sh
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc         0 Mar 13 13:35 boinc_lockfile
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc      2563 Mar 13 13:35 pandaJob.out
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc   1006473 Mar 13 13:35 agis_schedconf.cvmfs.json
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc       445 Mar 13 13:35 workernode_map.json
[2026-03-13 16:43:36] drwx------. 5 boinc boinc      4096 Mar 13 13:35 pilot3
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc 262452335 Mar 13 16:39 HITS.48966932._003184.pool.root.1
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc       528 Mar 13 16:39 boinc_task_state.xml
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc      1045 Mar 13 16:39 memory_monitor_summary.json
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc   1511578 Mar 13 16:39 agis_ddmendpoints.agis.ALL.json
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc    370821 Mar 13 16:39 log.48966932._003184.job.log.tgz.1
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc        95 Mar 13 16:39 pilot_heartbeat.json
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc      6359 Mar 13 16:40 heartbeat.json
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc      5192 Mar 13 16:40 pilotlog.txt
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc   1557997 Mar 13 16:40 log.48966932._003184.job.log.1
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc       357 Mar 13 16:40 output.list
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc       620 Mar 13 16:40 runtime_log
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc   1945600 Mar 13 16:40 result.tar.gz
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc      9222 Mar 13 16:40 runtime_log.err
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc       665 Mar 13 16:40 qbfMDmkacK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmekhLDmebm0Mm.diag
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc        26 Mar 13 16:43 wrapper_checkpoint.txt
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc      8192 Mar 13 16:43 boinc_mmap_file
[2026-03-13 16:43:36] -rw-r--r--. 1 boinc boinc     20824 Mar 13 16:43 stderr.txt
[2026-03-13 16:43:36] HITS file was successfully produced:
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc 262452335 Mar 13 16:39 shared/HITS.pool.root.1
[2026-03-13 16:43:36]  *** Contents of shared directory: ***
[2026-03-13 16:43:36] total 479288
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc 225763398 Mar 13 13:35 ATLAS.root_0
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc    597528 Mar 13 13:35 input.tar.gz
[2026-03-13 16:43:36] -rw-r--r--. 2 boinc boinc     15845 Mar 13 13:35 start_atlas.sh
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc 262452335 Mar 13 16:39 HITS.pool.root.1
[2026-03-13 16:43:36] -rw-------. 1 boinc boinc   1945600 Mar 13 16:40 result.tar.gz
16:43:37 (3167794): run_atlas exited; CPU time 43321.382011
16:43:37 (3167794): called boinc_finish(0)

</stderr_txt>
]]>

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