Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:44:36 (586809): wrapper (7.7.26015): starting
21:44:36 (586809): wrapper: running run_atlas (--nthreads 9)
[2026-03-11 21:44:36] Arguments: --nthreads 9
[2026-03-11 21:44:36] Threads: 9
[2026-03-11 21:44:36] Checking for CVMFS
[2026-03-11 21:44:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 21:44:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 21:44:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 21:44:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 21:44:37] 2.13.3.0 12497 181911 313964 157178 2 721 17623502 32935936 37253 16776704 0 989481607 99.517 1242883730 36222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 21:44:37] CVMFS is ok
[2026-03-11 21:44:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 21:44:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 21:44:37] Further information can be found at the LHC@home message board.
[2026-03-11 21:44:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 21:44:37] Checking for apptainer binary...
[2026-03-11 21:44:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 21:44:37] Running /usr/bin/apptainer --version
[2026-03-11 21:44:37] apptainer version 1.4.5-2.el9
[2026-03-11 21:44:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 21:44:38] c7-7-35.aglt2.org
[2026-03-11 21:44:38] apptainer works
[2026-03-11 21:44:38] Set ATHENA_PROC_NUMBER=9
[2026-03-11 21:44:38] Set ATHENA_CORE_NUMBER=9
[2026-03-11 21:44:38] Starting ATLAS job with PandaID=7036583361
[2026-03-11 21:44:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 03:32:33]  *** The last 200 lines of the pilot log: ***
[2026-03-12 03:32:33] 2026-03-12 07:31:37,925 | INFO     | preparing for final server update for job 7036583361 in state='finished'
[2026-03-12 03:32:33] 2026-03-12 07:31:37,925 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036583361/jobReport.json
[2026-03-12 03:32:33] 2026-03-12 07:31:37,928 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-12 03:32:33] 2026-03-12 07:31:37,929 | INFO     | this job has now completed (state=finished)
[2026-03-12 03:32:33] 2026-03-12 07:31:37,929 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 03:32:33] 2026-03-12 07:31:37,929 | INFO     | log transfer has been attempted: DONE
[2026-03-12 03:32:33] 2026-03-12 07:31:37,929 | INFO     | job 7036583361 has finished - writing final server update
[2026-03-12 03:32:33] 2026-03-12 07:31:37,929 | INFO     | total number of processed events: 400 (read)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,030 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036583361/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,031 | INFO     | extracted standard info from prmon json
[2026-03-12 03:32:33] 2026-03-12 07:31:38,053 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 03:32:33] 2026-03-12 07:31:38,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 03:32:33] 2026-03-12 07:31:38,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 03:32:33] 2026-03-12 07:31:38,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 03:32:33] 2026-03-12 07:31:38,085 | INFO     | time since job start (20748s) is within the limit (349056.0s)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,086 | INFO     | fitting pss+swap vs Time
[2026-03-12 03:32:33] 2026-03-12 07:31:38,086 | INFO     | sum of square deviations: 12187478424.644121
[2026-03-12 03:32:33] 2026-03-12 07:31:38,088 | INFO     | sum of deviations: 5814252989.938229
[2026-03-12 03:32:33] 2026-03-12 07:31:38,088 | INFO     | mean x: 1773290326.532353
[2026-03-12 03:32:33] 2026-03-12 07:31:38,089 | INFO     | mean y: 2577628.4147058823
[2026-03-12 03:32:33] 2026-03-12 07:31:38,089 | INFO     | intersect: -843402009.3601472
[2026-03-12 03:32:33] 2026-03-12 07:31:38,089 | INFO     | chi2: 3.128766464626347
[2026-03-12 03:32:33] 2026-03-12 07:31:38,089 | INFO     | sum of square deviations: 11657667194.638853
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | sum of deviations: 27706639056.328373
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | mean x: 1773290174.0328357
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | mean y: 2583853.970149254
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | intersect: -4211973825.001538
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | chi2: 2.4440581985286984
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | current chi2=2.4440581985286984 (change=21.88428806812271 %)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,092 | INFO     | right removable region: 334
[2026-03-12 03:32:33] 2026-03-12 07:31:38,093 | INFO     | sum of square deviations: 11657660484.638855
[2026-03-12 03:32:33] 2026-03-12 07:31:38,101 | INFO     | sum of deviations: -71960112147.10149
[2026-03-12 03:32:33] 2026-03-12 07:31:38,101 | INFO     | mean x: 1773290479.0328357
[2026-03-12 03:32:33] 2026-03-12 07:31:38,101 | INFO     | mean y: 2599926.1910447762
[2026-03-12 03:32:33] 2026-03-12 07:31:38,101 | INFO     | intersect: 10948722598.809204
[2026-03-12 03:32:33] 2026-03-12 07:31:38,102 | INFO     | chi2: 0.9611030413197281
[2026-03-12 03:32:33] 2026-03-12 07:31:38,102 | INFO     | current chi2=0.9611030413197281 (change=69.28172645079447 %)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,102 | INFO     | sum of square deviations: 11143424232.13342
[2026-03-12 03:32:33] 2026-03-12 07:31:38,110 | INFO     | sum of deviations: -75477336720.06667
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | mean x: 1773290631.5333333
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | mean y: 2600950.596969697
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | intersect: 12013563766.930187
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | chi2: 0.9334436413597031
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | current chi2=0.9334436413597031 (change=2.8778808068326134 %)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,111 | INFO     | left removable region: 20
[2026-03-12 03:32:33] 2026-03-12 07:31:38,112 | INFO     | sum of square deviations: 9599876328.114588
[2026-03-12 03:32:33] 2026-03-12 07:31:38,116 | INFO     | sum of deviations: -20355011544.394905
[2026-03-12 03:32:33] 2026-03-12 07:31:38,116 | INFO     | mean x: 1773290753.5350318
[2026-03-12 03:32:33] 2026-03-12 07:31:38,116 | INFO     | mean y: 2597254.4904458597
[2026-03-12 03:32:33] 2026-03-12 07:31:38,116 | INFO     | intersect: 3762578375.712185
[2026-03-12 03:32:33] 2026-03-12 07:31:38,116 | INFO     | chi2: 0.10289014613655043
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | current memory leak: -2.12 B/s (using 314 data points, chi2=0.10)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | could have reported an average CPU frequency of 3275 MHz (15 samples)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | ..............................
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | . Timing measurements:
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | . get job = 0 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,117 | INFO     | . initial setup = 21 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | . payload setup = 23 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | . stage-in = 0 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | . payload execution = 20703 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | . stage-out = 10 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | . log creation = 0 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,118 | INFO     | ..............................
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | 
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | job summary report
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | --------------------------------------------------
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | PanDA job id: 7036583361
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | task id: 48850390
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | errors: (none)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 03:32:33] 2026-03-12 07:31:38,185 | INFO     | pilot state: finished 
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | transexitcode: 0
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | exeerrorcode: 0
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | exeerrordiag: 
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | exitcode: 0
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | exitmsg: OK
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | cpuconsumptiontime: 42453 s
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | nevents: 400
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | neventsw: 0
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | pid: 598927
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | pgrp: 598927
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | corecount: 9
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | event service: False
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | sizes: {0: 2279871, 1: 2280332, 20732: 2313817, 20733: 2313816, 20744: 2322870, 20745: 2322926, 20747: 2323248}
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | --------------------------------------------------
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | 
[2026-03-12 03:32:33] 2026-03-12 07:31:38,186 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-12 03:32:33] 2026-03-12 07:31:38,316 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | job 7036583361 has completed (purged errors)
[2026-03-12 03:32:33] 2026-03-12 07:31:38,318 | INFO     | overall cleanup function is called
[2026-03-12 03:32:33] 2026-03-12 07:31:39,352 | INFO     | --- collectZombieJob: --- 10, [598927]
[2026-03-12 03:32:33] 2026-03-12 07:31:39,352 | INFO     | zombie collector waiting for pid 598927
[2026-03-12 03:32:33] 2026-03-12 07:31:39,352 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 03:32:33] 2026-03-12 07:31:39,352 | INFO     | collected zombie processes
[2026-03-12 03:32:33] 2026-03-12 07:31:39,352 | INFO     | will attempt to kill all subprocesses of pid=598927
[2026-03-12 03:32:33] 2026-03-12 07:31:41,939 | INFO     | process IDs to be killed: [598927] (in reverse order)
[2026-03-12 03:32:33] 2026-03-12 07:31:42,294 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 03:32:33] 2026-03-12 07:31:42,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 03:32:33] 2026-03-12 07:31:42,451 | INFO     | did not find any defunct processes belonging to 598927
[2026-03-12 03:32:33] 2026-03-12 07:31:42,584 | INFO     | did not find any defunct processes belonging to 598927
[2026-03-12 03:32:33] 2026-03-12 07:31:42,600 | INFO     | ready for new job
[2026-03-12 03:32:33] 2026-03-12 07:31:42,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 03:32:33] 2026-03-12 07:31:42,611 | INFO     | **************************************
[2026-03-12 03:32:33] 2026-03-12 07:31:42,611 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 03:32:33] 2026-03-12 07:31:42,611 | INFO     | **************************************
[2026-03-12 03:32:33] 2026-03-12 07:31:42,611 | INFO     | 
[2026-03-12 03:32:33] 2026-03-12 07:31:42,639 | INFO     | architecture information:
[2026-03-12 03:32:33] 2026-03-12 07:31:42,647 | INFO     | executing command: cat /etc/os-release
[2026-03-12 03:32:33] 2026-03-12 07:31:42,779 | INFO     | cat /etc/os-release:
[2026-03-12 03:32:33] NAME="CentOS Linux"
[2026-03-12 03:32:33] VERSION="7 (Core)"
[2026-03-12 03:32:33] ID="centos"
[2026-03-12 03:32:33] ID_LIKE="rhel fedora"
[2026-03-12 03:32:33] VERSION_ID="7"
[2026-03-12 03:32:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 03:32:33] ANSI_COLOR="0;31"
[2026-03-12 03:32:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 03:32:33] HOME_URL="https://www.centos.org/"
[2026-03-12 03:32:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 03:32:33] 
[2026-03-12 03:32:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 03:32:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 03:32:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 03:32:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 03:32:33] 
[2026-03-12 03:32:33] 2026-03-12 07:31:42,779 | INFO     | **************************************
[2026-03-12 03:32:33] 2026-03-12 07:31:43,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-12 03:32:33] 2026-03-12 07:31:43,418 | INFO     | sufficient remaining disk space (71640809472 B)
[2026-03-12 03:32:33] 2026-03-12 07:31:43,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 03:32:33] 2026-03-12 07:31:43,419 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 03:32:33] 2026-03-12 07:31:43,419 | INFO     | update_server=False
[2026-03-12 03:32:33] 2026-03-12 07:31:43,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 03:32:33] 2026-03-12 07:31:43,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 03:32:33] 2026-03-12 07:31:43,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 03:32:33] 2026-03-12 07:31:43,449 | INFO     | all job control threads have been joined
[2026-03-12 03:32:33] 2026-03-12 07:31:43,698 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 03:32:33] 2026-03-12 07:31:43,698 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 03:32:33] 2026-03-12 07:31:43,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 03:32:33] 2026-03-12 07:31:43,698 | INFO     | will abort loop
[2026-03-12 03:32:33] 2026-03-12 07:31:43,929 | INFO     | all payload control threads have been joined
[2026-03-12 03:32:33] 2026-03-12 07:31:44,425 | INFO     | [job] retrieve thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:44,444 | INFO     | [job] queue monitor thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:44,454 | INFO     | all data control threads have been joined
[2026-03-12 03:32:33] 2026-03-12 07:31:44,454 | INFO     | [job] control thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:44,698 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:44,704 | INFO     | [job] job monitor thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:44,935 | INFO     | [payload] control thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,150 | INFO     | [payload] failed_post thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,272 | INFO     | [data] copytool_in thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,326 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,427 | INFO     | [data] copytool_out thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,460 | INFO     | [data] control thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,511 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,630 | INFO     | [job] validate thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:45,840 | INFO     | [payload] validate_post thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:31:46,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 03:32:33] 2026-03-12 07:31:50,534 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 03:32:33] 2026-03-12 07:32:13,731 | INFO     | PID=593182 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 03:32:33] 2026-03-12 07:32:13,731 | INFO     | .. there are 56 such processes running
[2026-03-12 03:32:33] 2026-03-12 07:32:13,732 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 03:32:33] 2026-03-12 07:32:13,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 03:32:33] 2026-03-12 07:32:13,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 03:32:33] 2026-03-12 07:32:25,699 | INFO     | [monitor] cgroup control has ended
[2026-03-12 03:32:33] 2026-03-12 07:32:26,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614181226304)>', '<ExcThread(monitor, started 140613328561920)>']
[2026-03-12 03:32:33] 2026-03-12 07:32:26,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 03:32:33] 2026-03-12 07:32:26,816 | INFO     | [monitor] control thread has ended
[2026-03-12 03:32:33] 2026-03-12 07:32:31,576 | INFO     | all workflow threads have been joined
[2026-03-12 03:32:33] 2026-03-12 07:32:31,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 03:32:33] 2026-03-12 07:32:31,576 | INFO     | traces error code: 0
[2026-03-12 03:32:33] 2026-03-12 07:32:31,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 03:32:33] 2026-03-12 07:32:31,836 [wrapper] ==== pilot stdout END ====
[2026-03-12 03:32:33] 2026-03-12 07:32:31,888 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 03:32:33] 2026-03-12 07:32:31,910 [wrapper] pilotpid: 593182
[2026-03-12 03:32:33] 2026-03-12 07:32:31,932 [wrapper] Pilot exit status: 0
[2026-03-12 03:32:33] 2026-03-12 07:32:32,222 [wrapper] pandaids: 7036583361
[2026-03-12 03:32:33] 2026-03-12 07:32:32,708 [wrapper] cleanup supervisor_pilot 2277644 593183
[2026-03-12 03:32:33] 2026-03-12 07:32:32,729 [wrapper] Test setup, not cleaning
[2026-03-12 03:32:33] 2026-03-12 07:32:32,785 [wrapper] apfmon messages muted
[2026-03-12 03:32:33] 2026-03-12 07:32:32,801 [wrapper] ==== wrapper stdout END ====
[2026-03-12 03:32:33] 2026-03-12 07:32:32,828 [wrapper] ==== wrapper stderr END ====
[2026-03-12 03:32:33]  *** Error codes and diagnostics ***
[2026-03-12 03:32:33]     "exeErrorCode": 0,
[2026-03-12 03:32:33]     "exeErrorDiag": "",
[2026-03-12 03:32:33]     "pilotErrorCode": 0,
[2026-03-12 03:32:33]     "pilotErrorDiag": "",
[2026-03-12 03:32:33]  *** Listing of results directory ***
[2026-03-12 03:32:33] total 451924
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 14:08 queuedata.json
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 14:08 pilot3.tar.gz
[2026-03-12 03:32:33] -rwx------. 1 boincer umatlas     36322 Mar  3 14:08 runpilot2-wrapper.sh
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas       100 Mar 11 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 03:32:33] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 21:44 run_atlas
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas       105 Mar 11 21:44 job.xml
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas 249438756 Mar 11 21:44 EVNT.48458793._000001.pool.root.1
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas    597963 Mar 11 21:44 input.tar.gz
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 21:44 start_atlas.sh
[2026-03-12 03:32:33] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 21:44 shared
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas         0 Mar 11 21:44 boinc_lockfile
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas      2618 Mar 11 21:44 pandaJob.out
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas        57 Mar 11 21:44 setup.sh.local
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas   1006235 Mar 11 21:45 agis_schedconf.cvmfs.json
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas       429 Mar 11 21:45 workernode_map.json
[2026-03-12 03:32:33] drwx------. 5 boincer umatlas      4096 Mar 11 21:45 pilot3
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas      6947 Mar 12 03:27 init_data.xml
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas 203132928 Mar 12 03:30 HITS.48850390._000003.pool.root.1
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas       531 Mar 12 03:30 boinc_task_state.xml
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas      1044 Mar 12 03:31 memory_monitor_summary.json
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas   1511578 Mar 12 03:31 agis_ddmendpoints.agis.ALL.json
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas    533953 Mar 12 03:31 log.48850390._000003.job.log.tgz.1
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas      6324 Mar 12 03:31 heartbeat.json
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas        95 Mar 12 03:32 pilot_heartbeat.json
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 03:32 boinc_mmap_file
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas        28 Mar 12 03:32 wrapper_checkpoint.txt
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas      5005 Mar 12 03:32 pilotlog.txt
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas   2594036 Mar 12 03:32 log.48850390._000003.job.log.1
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas       357 Mar 12 03:32 output.list
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas       620 Mar 12 03:32 runtime_log
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas   3143680 Mar 12 03:32 result.tar.gz
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas       659 Mar 12 03:32 zooNDm8HkH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzKFLDmoogCMm.diag
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas      9337 Mar 12 03:32 runtime_log.err
[2026-03-12 03:32:33] -rw-r--r--. 1 boincer umatlas     21348 Mar 12 03:32 stderr.txt
[2026-03-12 03:32:33] HITS file was successfully produced:
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas 203132928 Mar 12 03:30 shared/HITS.pool.root.1
[2026-03-12 03:32:33]  *** Contents of shared directory: ***
[2026-03-12 03:32:33] total 445648
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas 249438756 Mar 11 21:44 ATLAS.root_0
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas    597963 Mar 11 21:44 input.tar.gz
[2026-03-12 03:32:33] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 21:44 start_atlas.sh
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas 203132928 Mar 12 03:30 HITS.pool.root.1
[2026-03-12 03:32:33] -rw-------. 1 boincer umatlas   3143680 Mar 12 03:32 result.tar.gz
03:32:35 (586809): run_atlas exited; CPU time 43496.492987
03:32:35 (586809): called boinc_finish(0)

</stderr_txt>
]]>

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