Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-12 05:18:18 (9152): vboxwrapper version 26210
2026-03-12 05:18:18 (9152): BOINC client version: 8.2.8
2026-03-12 05:18:19 (9152): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-12 05:18:19 (9152): Successfully copied 'init_data.xml' to the shared directory.
2026-03-12 05:18:19 (9152): Create VM. (boinc_751b89265cce5f4b, slot#5)
2026-03-12 05:18:20 (9152): Setting Memory Size for VM. (4800MB)
2026-03-12 05:18:20 (9152): Setting CPU Count for VM. (8)
2026-03-12 05:18:20 (9152): Setting Chipset Options for VM.
2026-03-12 05:18:21 (9152): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-12 05:18:21 (9152): Setting Boot Options for VM.
2026-03-12 05:18:21 (9152): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-12 05:18:22 (9152): Enabling VM Network Access.
2026-03-12 05:18:22 (9152): Disabling USB Support for VM.
2026-03-12 05:18:22 (9152): Disabling COM Port Support for VM.
2026-03-12 05:18:23 (9152): Disabling LPT Port Support for VM.
2026-03-12 05:18:23 (9152): Disabling Audio Support for VM.
2026-03-12 05:18:23 (9152): Disabling Clipboard Support for VM.
2026-03-12 05:18:23 (9152): Disabling Drag and Drop Support for VM.
2026-03-12 05:18:24 (9152): Adding storage controller(s) to VM.
2026-03-12 05:18:24 (9152): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-12 05:18:24 (9152): Adding VirtualBox Guest Additions to VM.
2026-03-12 05:18:25 (9152): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-12 05:18:25 (9152): forwarding host port 64340 to guest port 80
2026-03-12 05:18:25 (9152): Enabling remote desktop for VM.
2026-03-12 05:18:25 (9152): Required extension pack not installed, remote desktop not enabled.
2026-03-12 05:18:25 (9152): Enabling shared directory for VM.
2026-03-12 05:18:26 (9152): Starting VM using VBoxManage interface. (boinc_751b89265cce5f4b, slot#5)
2026-03-12 05:18:30 (9152): Successfully started VM. (PID = '15324')
2026-03-12 05:18:30 (9152): Reporting VM Process ID to BOINC.
2026-03-12 05:18:30 (9152): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-12 05:18:30 (9152): Guest Log: CPUID EDX: 0x178bfbff
2026-03-12 05:18:30 (9152): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-12 05:18:30 (9152): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-12 05:18:30 (9152): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-12 05:18:30 (9152): Detected: Web Application Enabled (http://localhost:64340)
2026-03-12 05:18:30 (9152): Preference change detected
2026-03-12 05:18:30 (9152): Setting CPU throttle for VM. (75%)
2026-03-12 05:18:30 (9152): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-12 05:18:32 (9152): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-12 05:18:32 (9152): Guest Log: BIOS: Booting from Hard Disk...
2026-03-12 05:18:40 (9152): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-12 05:18:40 (9152): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-12 05:18:40 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-12 05:18:41 (9152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-12 05:18:57 (9152): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-12 05:18:57 (9152): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-12 05:19:12 (9152): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000166 main     Log opened 2026-03-12T05:19:10.989984000Z
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000362 main     OS Product: Linux
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000498 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000626 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000756 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000757 main     Process ID: 1373
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.000757 main     Package type: LINUX_64BITS_GENERIC
2026-03-12 05:19:12 (9152): Guest Log: 00:00:00.003295 main     5.2.32 r132073 started. Verbose level = 0
2026-03-12 05:19:12 (9152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-12 05:19:12 (9152): Guest Log: [INFO] Mounting shared directory
2026-03-12 05:19:12 (9152): Guest Log: [INFO] Checking for init_data.xml
2026-03-12 05:19:22 (9152): Guest Log: 00:00:10.011486 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 877 690 000ns (GuestNow=1 773 289 162 120 781 000 ns GuestLast=1 773 292 750 998 471 000 ns fSetTimeLastLoop=true )
2026-03-12 05:19:22 (9152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-12 05:19:22 (9152): Guest Log: [INFO] Detected branch: prod
2026-03-12 05:19:24 (9152): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-12 05:19:24 (9152): Guest Log: Copying input files
2026-03-12 05:19:33 (9152): Guest Log: Copied input files into RunAtlas.
2026-03-12 05:19:33 (9152): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-12 05:19:33 (9152): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-12 05:19:33 (9152): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-12 05:19:33 (9152): Guest Log: Further information can be found at the LHC@home message board.
2026-03-12 05:19:42 (9152): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-12 05:19:43 (9152): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-12 05:19:43 (9152): Guest Log: 2.6.3.0 1650 0 32180 157157 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-12 05:19:44 (9152): Guest Log: copied the webapp to /var/www
2026-03-12 05:19:44 (9152): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-12 05:19:44 (9152): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-12 05:19:44 (9152): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-12 05:19:45 (9152): Guest Log:  *** Starting ATLAS job. (PandaID=7050046573 taskID=48967085) ***
2026-03-12 06:58:38 (9152): Status Report: Elapsed Time: '6000.000000'
2026-03-12 06:58:38 (9152): Status Report: CPU Time: '23530.093750'
2026-03-12 07:02:03 (9152): Guest Log:  *** Job finished ***
2026-03-12 07:02:03 (9152): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:41,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:41,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:52,184 | INFO     | [monitor] cgroup control has ended
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:53,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657843406656)>', '<ExcThread(monitor, started 140657393907456)>']
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:54,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:54,229 | INFO     | [monitor] control thread has ended
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:58,824 | INFO     | all workflow threads have been joined
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:58,824 | INFO     | end of generic workflow (traces error code: 0)
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:58,824 | INFO     | traces error code: 0
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:58,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,067 [wrapper] ==== pilot stdout END ====
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,110 [wrapper] ==== wrapper stdout RESUME ====
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,134 [wrapper] pilotpid: 6097
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,167 [wrapper] Pilot exit status: 0
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,367 [wrapper] pandaids: 7050046573
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,603 [wrapper] cleanup supervisor_pilot 25701 6098
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,626 [wrapper] Test setup, not cleaning
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,652 [wrapper] apfmon messages muted
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,692 [wrapper] ==== wrapper stdout END ====
2026-03-12 07:02:03 (9152): Guest Log: 2026-03-12 06:01:59,721 [wrapper] ==== wrapper stderr END ====
2026-03-12 07:02:03 (9152): Guest Log:  *** Error codes and diagnostics ***
2026-03-12 07:02:03 (9152): Guest Log:     "exeErrorCode": 0,
2026-03-12 07:02:03 (9152): Guest Log:     "exeErrorDiag": "",
2026-03-12 07:02:03 (9152): Guest Log:     "pilotErrorCode": 0,
2026-03-12 07:02:03 (9152): Guest Log:     "pilotErrorDiag": "",
2026-03-12 07:02:03 (9152): Guest Log:  *** Listing of results directory ***
2026-03-12 07:02:03 (9152): Guest Log: total 199708
2026-03-12 07:02:03 (9152): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 11 17:00 pilot3.tar.gz
2026-03-12 07:02:03 (9152): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 11 17:28 queuedata.json
2026-03-12 07:02:03 (9152): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 11 17:29 runpilot2-wrapper.sh
2026-03-12 07:02:03 (9152): Guest Log: -rwxr-xr-x. 1 atlas atlas      8820 Mar 12 04:19 init_data.xml
2026-03-12 07:02:03 (9152): Guest Log: -rwxr-xr-x. 1 atlas atlas    597523 Mar 12 04:19 input.tar.gz
2026-03-12 07:02:03 (9152): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 12 04:19 start_atlas.sh
2026-03-12 07:02:03 (9152): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 12 04:19 EVNT.48967083._000440.pool.root.1 -> /data/./ATLAS.root_0
2026-03-12 07:02:03 (9152): Guest Log: -rw-r--r--. 1 atlas atlas      2571 Mar 12 04:19 pandaJob.out
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 12 04:22 agis_ddmendpoints.agis.ALL.json
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas       428 Mar 12 04:22 workernode_map.json
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas   1007003 Mar 12 04:23 agis_schedconf.cvmfs.json
2026-03-12 07:02:03 (9152): Guest Log: drwx------. 5 atlas atlas      4096 Mar 12 04:23 pilot3
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas 198272817 Mar 12 06:00 HITS.48967085._010467.pool.root.1
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas      1021 Mar 12 06:00 memory_monitor_summary.json
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas    353841 Mar 12 06:01 log.48967085._010467.job.log.tgz.1
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas      6358 Mar 12 06:01 heartbeat.json
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas        95 Mar 12 06:01 pilot_heartbeat.json
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 12 06:01 pilotlog.txt
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas    825009 Mar 12 06:01 log.48967085._010467.job.log.1
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas       357 Mar 12 06:02 output.list
2026-03-12 07:02:03 (9152): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 12 06:02 runtime_log
2026-03-12 07:02:03 (9152): Guest Log: -rw-------. 1 atlas atlas   1198080 Mar 12 06:02 result.tar.gz
2026-03-12 07:02:03 (9152): Guest Log: -rw-r--r--. 1 atlas atlas      8775 Mar 12 06:02 runtime_log.err
2026-03-12 07:02:04 (9152): Guest Log: -rw-------. 1 atlas atlas       663 Mar 12 06:02 DbFMDmrXcK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQTkLDmoM62em.diag
2026-03-12 07:02:04 (9152): Guest Log: Looking for outputfile HITS.48967085._010467.pool.root.1
2026-03-12 07:02:04 (9152): Guest Log: HITS file was successfully produced
2026-03-12 07:02:04 (9152): Guest Log: -rw-------. 1 atlas atlas 198272817 Mar 12 06:00 /home/atlas/RunAtlas/HITS.48967085._010467.pool.root.1
2026-03-12 07:02:12 (9152): Guest Log: Successfully finished the ATLAS job!
2026-03-12 07:02:12 (9152): Guest Log: Copying the results back to the shared directory!
2026-03-12 07:02:12 (9152): Guest Log:  *** Contents of shared directory: ***
2026-03-12 07:02:12 (9152): Guest Log: total 402232
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root 211782055 Mar 12 04:18 ATLAS.root_0
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root 198272817 Mar 12  2026 HITS.pool.root.1
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root      8820 Mar 12 04:18 init_data.xml
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root    597523 Mar 11 21:30 input.tar.gz
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root   1198080 Mar 12  2026 result.tar.gz
2026-03-12 07:02:12 (9152): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 11 21:30 start_atlas.sh
2026-03-12 07:02:12 (9152): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-12 07:02:12 (9152): VM Completion File Detected.
2026-03-12 07:02:12 (9152): Powering off VM.
2026-03-12 07:02:12 (9152): Successfully stopped VM.
2026-03-12 07:02:12 (9152): Deregistering VM. (boinc_751b89265cce5f4b, slot#5)
2026-03-12 07:02:12 (9152): Removing network bandwidth throttle group from VM.
2026-03-12 07:02:12 (9152): Removing VM from VirtualBox.
2026-03-12 07:02:18 (9152): called boinc_finish(0)

</stderr_txt>
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