Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:55 (2299677): wrapper (7.7.26015): starting
16:06:55 (2299677): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 16:06:55] Arguments: --nthreads 4
[2026-03-13 16:06:55] Threads: 4
[2026-03-13 16:06:55] Checking for CVMFS
[2026-03-13 16:06:55] No cvmfs_config command found, will try listing directly
[2026-03-13 16:06:55] CVMFS is ok
[2026-03-13 16:06:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 16:06:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 16:06:55] Further information can be found at the LHC@home message board.
[2026-03-13 16:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 16:06:55] Checking for apptainer binary...
[2026-03-13 16:06:55] which: no apptainer in ((null))
[2026-03-13 16:06:55] apptainer is not installed, using version from CVMFS
[2026-03-13 16:06:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 16:06:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot140/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-13 16:06:55] apptainer works
[2026-03-13 16:06:55] Set ATHENA_PROC_NUMBER=4
[2026-03-13 16:06:55] Set ATHENA_CORE_NUMBER=4
[2026-03-13 16:06:55] Starting ATLAS job with PandaID=7050347641
[2026-03-13 16:06:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot140/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 17:48:35]  *** The last 200 lines of the pilot log: ***
[2026-03-13 17:48:35]  status=None
[2026-03-13 17:48:35]  status_code=0
[2026-03-13 17:48:35]  storage_token=
[2026-03-13 17:48:35]  surl=/var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/log.48967094._004836.job.log.tgz.1
[2026-03-13 17:48:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/95/log.48967094._004836.job.log.tgz.1
[2026-03-13 17:48:35]  workdir=None
[2026-03-13 17:48:35] ]
[2026-03-13 17:48:35] 2026-03-13 16:48:01,147 | INFO     | transferring file log.48967094._004836.job.log.tgz.1 from /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/log.48967094._004836.job.log.tgz.1 to /var/lib/
[2026-03-13 17:48:35] 2026-03-13 16:48:01,147 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/log.48967094._004836.job.log.tgz.1 /var/lib/boinc/var/slot140/slots/0/
[2026-03-13 17:48:35] 2026-03-13 16:48:01,165 | INFO     | adding to output.list: log.48967094._004836.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/95/log.48967094._004836.job.log.tg
[2026-03-13 17:48:35] 2026-03-13 16:48:01,165 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 17:48:35] 2026-03-13 16:48:01,166 | INFO     | summary of transferred files:
[2026-03-13 17:48:35] 2026-03-13 16:48:01,166 | INFO     |  -- lfn=log.48967094._004836.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 17:48:35] 2026-03-13 16:48:01,166 | INFO     | stage-out finished correctly
[2026-03-13 17:48:35] 2026-03-13 16:48:01,980 | INFO     | time since job start (6053s) is within the limit (345600.0s)
[2026-03-13 17:48:35] 2026-03-13 16:48:02,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 17:48:35] 2026-03-13 16:48:03,138 | INFO     | job 7050347641 has state=finished
[2026-03-13 17:48:35] 2026-03-13 16:48:03,142 | INFO     | preparing for final server update for job 7050347641 in state='finished'
[2026-03-13 17:48:35] 2026-03-13 16:48:03,142 | INFO     | reading metadata from: /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/jobReport.json
[2026-03-13 17:48:35] 2026-03-13 16:48:03,144 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot140/slots/0/workernode_map.json
[2026-03-13 17:48:35] 2026-03-13 16:48:03,144 | INFO     | this job has now completed (state=finished)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,144 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,145 | INFO     | log transfer has been attempted: DONE
[2026-03-13 17:48:35] 2026-03-13 16:48:03,145 | INFO     | job 7050347641 has finished - writing final server update
[2026-03-13 17:48:35] 2026-03-13 16:48:03,145 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_864328/.job.ad'
[2026-03-13 17:48:35] 2026-03-13 16:48:03,145 | INFO     | total number of processed events: 400 (read)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,162 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,163 | INFO     | extracted standard info from prmon json
[2026-03-13 17:48:35] 2026-03-13 16:48:03,163 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 17:48:35] 2026-03-13 16:48:03,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 17:48:35] 2026-03-13 16:48:03,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 17:48:35] 2026-03-13 16:48:03,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 17:48:35] 2026-03-13 16:48:03,164 | INFO     | fitting pss+swap vs Time
[2026-03-13 17:48:35] 2026-03-13 16:48:03,164 | INFO     | sum of square deviations: 241429643.0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | sum of deviations: 505577607.49999994
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | mean x: 1773417530.5
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | mean y: 2327993.184782609
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | intersect: -3711384130.2629094
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | chi2: 0.0006621546134770945
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | current memory leak: 2.09 B/s (using 92 data points, chi2=0.00)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | could have reported an average CPU frequency of 3564 MHz (7 samples)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | ..............................
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . Timing measurements:
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . get job = 0 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . initial setup = 5 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . payload setup = 5 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . stage-in = 0 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . payload execution = 6031 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . stage-out = 0 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | . log creation = 0 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,165 | INFO     | ..............................
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | 
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | job summary report
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | --------------------------------------------------
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | PanDA job id: 7050347641
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | task id: 48967094
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | errors: (none)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | pilot state: finished 
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | transexitcode: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,212 | INFO     | exeerrorcode: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | exeerrordiag: 
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | exitcode: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | exitmsg: OK
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | cpuconsumptiontime: 23130 s
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | nevents: 400
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | neventsw: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | pid: 2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | pgrp: 2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | corecount: 4
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | event service: False
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | sizes: {0: 2280236, 10: 2280236, 6040: 2307025, 6041: 2307024, 6042: 2316102, 6043: 2316158, 6044: 2316480}
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | --------------------------------------------------
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | 
[2026-03-13 17:48:35] 2026-03-13 16:48:03,213 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot140/slots/0
[2026-03-13 17:48:35] 2026-03-13 16:48:03,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | job 7050347641 has completed (purged errors)
[2026-03-13 17:48:35] 2026-03-13 16:48:03,235 | INFO     | overall cleanup function is called
[2026-03-13 17:48:35] 2026-03-13 16:48:04,072 | WARNING  | process 2332075 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 17:48:35] 2026-03-13 16:48:04,242 | INFO     | --- collectZombieJob: --- 10, [2332075]
[2026-03-13 17:48:35] 2026-03-13 16:48:04,244 | INFO     | zombie collector waiting for pid 2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:04,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 17:48:35] 2026-03-13 16:48:04,244 | INFO     | collected zombie processes
[2026-03-13 17:48:35] 2026-03-13 16:48:04,244 | INFO     | will attempt to kill all subprocesses of pid=2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:04,759 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:48:35] 2026-03-13 16:48:04,760 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 17:48:35] 2026-03-13 16:48:04,760 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-13 17:48:35] 2026-03-13 16:48:04,760 | WARNING  | maxPSS not found in memory monitor output
[2026-03-13 17:48:35] 2026-03-13 16:48:04,760 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/payload.stdout) since it has not been created yet
[2026-03-13 17:48:35] 2026-03-13 16:48:04,760 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-13 17:48:35] 2026-03-13 16:48:04,777 | INFO     | sufficient remaining disk space (20935868416 B)
[2026-03-13 17:48:35] 2026-03-13 16:48:04,778 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-13 17:48:35] 2026-03-13 16:48:04,778 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7050347641/HITS.48967094._004836.pool.root.1 since it does not exist
[2026-03-13 17:48:35] 2026-03-13 16:48:05,780 | INFO     | process IDs to be killed: [2332075] (in reverse order)
[2026-03-13 17:48:35] 2026-03-13 16:48:05,981 | INFO     | number of running child processes to parent process 2332075: 1
[2026-03-13 17:48:35] 2026-03-13 16:48:05,981 | INFO     | maximum number of monitored processes: 6
[2026-03-13 17:48:35] 2026-03-13 16:48:05,981 | INFO     | aborting job monitoring since job object (job id=7050347641) has expired
[2026-03-13 17:48:35] 2026-03-13 16:48:06,022 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 17:48:35] 2026-03-13 16:48:06,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 17:48:35] 2026-03-13 16:48:06,056 | INFO     | did not find any defunct processes belonging to 2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:06,088 | INFO     | did not find any defunct processes belonging to 2332075
[2026-03-13 17:48:35] 2026-03-13 16:48:06,088 | INFO     | ready for new job
[2026-03-13 17:48:35] 2026-03-13 16:48:06,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 17:48:35] 2026-03-13 16:48:06,090 | INFO     | **************************************
[2026-03-13 17:48:35] 2026-03-13 16:48:06,090 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 17:48:35] 2026-03-13 16:48:06,090 | INFO     | **************************************
[2026-03-13 17:48:35] 2026-03-13 16:48:06,090 | INFO     | 
[2026-03-13 17:48:35] 2026-03-13 16:48:06,096 | INFO     | architecture information:
[2026-03-13 17:48:35] 2026-03-13 16:48:06,096 | INFO     | executing command: cat /etc/os-release
[2026-03-13 17:48:35] 2026-03-13 16:48:06,109 | INFO     | cat /etc/os-release:
[2026-03-13 17:48:35] NAME="CentOS Linux"
[2026-03-13 17:48:35] VERSION="7 (Core)"
[2026-03-13 17:48:35] ID="centos"
[2026-03-13 17:48:35] ID_LIKE="rhel fedora"
[2026-03-13 17:48:35] VERSION_ID="7"
[2026-03-13 17:48:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 17:48:35] ANSI_COLOR="0;31"
[2026-03-13 17:48:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 17:48:35] HOME_URL="https://www.centos.org/"
[2026-03-13 17:48:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 17:48:35] 
[2026-03-13 17:48:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 17:48:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 17:48:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 17:48:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 17:48:35] 
[2026-03-13 17:48:35] 2026-03-13 16:48:06,109 | INFO     | **************************************
[2026-03-13 17:48:35] 2026-03-13 16:48:06,612 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | INFO     | sufficient remaining disk space (20931674112 B)
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | INFO     | update_server=False
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 17:48:35] 2026-03-13 16:48:06,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:48:35] 2026-03-13 16:48:06,628 | INFO     | will abort loop
[2026-03-13 17:48:35] 2026-03-13 16:48:06,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 17:48:35] 2026-03-13 16:48:06,863 | INFO     | all payload control threads have been joined
[2026-03-13 17:48:35] 2026-03-13 16:48:07,360 | INFO     | all data control threads have been joined
[2026-03-13 17:48:35] 2026-03-13 16:48:07,628 | INFO     | [job] retrieve thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:07,633 | INFO     | [job] job monitor thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:07,725 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:07,792 | INFO     | [job] validate thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:07,801 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:07,855 | INFO     | all job control threads have been joined
[2026-03-13 17:48:35] 2026-03-13 16:48:07,868 | INFO     | [payload] control thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,146 | INFO     | [data] copytool_in thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,147 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 17:48:35] 2026-03-13 16:48:08,360 | INFO     | [data] control thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,438 | INFO     | [payload] failed_post thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 17:48:35] 2026-03-13 16:48:08,727 | INFO     | [data] copytool_out thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,861 | INFO     | [job] control thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:08,869 | INFO     | [payload] validate_post thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:09,227 | INFO     | [job] queue monitor thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:12,446 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:16,999 | INFO     | job.realtimelogging is not enabled
[2026-03-13 17:48:35] 2026-03-13 16:48:18,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 17:48:35] 2026-03-13 16:48:18,322 | INFO     | [monitor] cgroup control has ended
[2026-03-13 17:48:35] 2026-03-13 16:48:18,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22358691968832)>', '<ExcThread(monitor, started 22358385477376)>']
[2026-03-13 17:48:35] 2026-03-13 16:48:23,534 | INFO     | all workflow threads have been joined
[2026-03-13 17:48:35] 2026-03-13 16:48:23,534 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 17:48:35] 2026-03-13 16:48:23,534 | INFO     | traces error code: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:23,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | INFO     | PID=2312245 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | INFO     | .. there are 45 such processes running
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 17:48:35] 2026-03-13 16:48:35,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 17:48:35] 2026-03-13 16:48:35,658 | INFO     | [monitor] control thread has ended
[2026-03-13 17:48:35] 2026-03-13 16:48:35,788 [wrapper] ==== pilot stdout END ====
[2026-03-13 17:48:35] 2026-03-13 16:48:35,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 17:48:35] 2026-03-13 16:48:35,793 [wrapper] pilotpid: 2312245
[2026-03-13 17:48:35] 2026-03-13 16:48:35,795 [wrapper] Pilot exit status: 0
[2026-03-13 17:48:35] 2026-03-13 16:48:35,804 [wrapper] pandaids: 7050347641
[2026-03-13 17:48:35] 2026-03-13 16:48:35,937 [wrapper] cleanup supervisor_pilot 3033959 2312246
[2026-03-13 17:48:35] 2026-03-13 16:48:35,940 [wrapper] Test setup, not cleaning
[2026-03-13 17:48:35] 2026-03-13 16:48:35,942 [wrapper] apfmon messages muted
[2026-03-13 17:48:35] 2026-03-13 16:48:35,944 [wrapper] ==== wrapper stdout END ====
[2026-03-13 17:48:35] 2026-03-13 16:48:35,945 [wrapper] ==== wrapper stderr END ====
[2026-03-13 17:48:35]  *** Error codes and diagnostics ***
[2026-03-13 17:48:35]     "exeErrorCode": 0,
[2026-03-13 17:48:35]     "exeErrorDiag": "",
[2026-03-13 17:48:35]     "pilotErrorCode": 0,
[2026-03-13 17:48:35]     "pilotErrorDiag": "",
[2026-03-13 17:48:35]  *** Listing of results directory ***
[2026-03-13 17:48:35] total 415860
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc      5111 Mar 11 22:07 queuedata.json
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc    585013 Mar 11 22:07 pilot3.tar.gz
[2026-03-13 17:48:35] -rwx------. 1 boinc boinc     36322 Mar 11 22:08 runpilot2-wrapper.sh
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc       100 Mar 13 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 17:48:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 16:06 run_atlas
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc       105 Mar 13 16:06 job.xml
[2026-03-13 17:48:35] -rw-r--r--. 2 boinc boinc    597534 Mar 13 16:06 input.tar.gz
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc      6708 Mar 13 16:06 init_data.xml
[2026-03-13 17:48:35] -rw-r--r--. 2 boinc boinc 217419449 Mar 13 16:06 EVNT.48967092._000212.pool.root.1
[2026-03-13 17:48:35] -rw-r--r--. 2 boinc boinc     15845 Mar 13 16:06 start_atlas.sh
[2026-03-13 17:48:35] drwxrwx--x. 2 boinc boinc      4096 Mar 13 16:06 shared
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc         0 Mar 13 16:06 boinc_lockfile
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc      2597 Mar 13 16:06 pandaJob.out
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc   1006539 Mar 13 16:07 agis_schedconf.cvmfs.json
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc   1511578 Mar 13 16:07 agis_ddmendpoints.agis.ALL.json
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc       445 Mar 13 16:07 workernode_map.json
[2026-03-13 17:48:35] drwx------. 5 boinc boinc      4096 Mar 13 16:07 pilot3
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc 202171919 Mar 13 17:47 HITS.48967094._004836.pool.root.1
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc       529 Mar 13 17:47 boinc_task_state.xml
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc        95 Mar 13 17:47 pilot_heartbeat.json
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc      1032 Mar 13 17:47 memory_monitor_summary.json
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc    281972 Mar 13 17:48 log.48967094._004836.job.log.tgz.1
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc      6353 Mar 13 17:48 heartbeat.json
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc      8192 Mar 13 17:48 boinc_mmap_file
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc        27 Mar 13 17:48 wrapper_checkpoint.txt
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc       824 Mar 13 17:48 pilotlog.txt
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc    873069 Mar 13 17:48 log.48967094._004836.job.log.1
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc       357 Mar 13 17:48 output.list
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc       620 Mar 13 17:48 runtime_log
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc   1177600 Mar 13 17:48 result.tar.gz
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc      9221 Mar 13 17:48 runtime_log.err
[2026-03-13 17:48:35] -rw-------. 1 boinc boinc       663 Mar 13 17:48 cuTNDmrxfK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmU5kLDmSiDUBo.diag
[2026-03-13 17:48:35] -rw-r--r--. 1 boinc boinc     22127 Mar 13 17:48 stderr.txt
[2026-03-13 17:48:36] HITS file was successfully produced:
[2026-03-13 17:48:36] -rw-------. 1 boinc boinc 202171919 Mar 13 17:47 shared/HITS.pool.root.1
[2026-03-13 17:48:36]  *** Contents of shared directory: ***
[2026-03-13 17:48:36] total 411520
[2026-03-13 17:48:36] -rw-r--r--. 2 boinc boinc    597534 Mar 13 16:06 input.tar.gz
[2026-03-13 17:48:36] -rw-r--r--. 2 boinc boinc 217419449 Mar 13 16:06 ATLAS.root_0
[2026-03-13 17:48:36] -rw-r--r--. 2 boinc boinc     15845 Mar 13 16:06 start_atlas.sh
[2026-03-13 17:48:36] -rw-------. 1 boinc boinc 202171919 Mar 13 17:47 HITS.pool.root.1
[2026-03-13 17:48:36] -rw-------. 1 boinc boinc   1177600 Mar 13 17:48 result.tar.gz
17:48:37 (2299677): run_atlas exited; CPU time 23412.675767
17:48:37 (2299677): called boinc_finish(0)

</stderr_txt>
]]>

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